Sequence of DPV Potato virus Y
Potato virus Y partial gene for polyprotein, helper component-proteinase, HC-Pro region, genomic RNA, isolate Henan8
ACC No: AM236852
Dated: 2008-03-19 | Length: 1368 | CRC: 752753217
ID AM236852; SV 1; linear; genomic RNA; STD; VRL; 1368 BP.
XX
AC AM236852;
XX
DT 19-MAR-2008 (Rel. 95, Created)
DT 19-MAR-2008 (Rel. 95, Last updated, Version 1)
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DE Potato virus Y partial gene for polyprotein, helper component-proteinase,
DE HC-Pro region, genomic RNA, isolate Henan8
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KW helper component-proteinase, HC-Pro; polyprotein.
XX
OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1368
RA Li X.;
RT ;
RL Submitted (19-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL Li X., Plant Protection, Shandong Agricultural University, NO.61, Daizong
RL Road, Tai'an City, Shandong Province, 271018, CHINA.
XX
RN [2]
RA Tian Y., Liu J., Zhu X., Li X., Valkonen J.P.T.;
RT "Sequence comparisons of Potato virus Y isolates from tobacco in China.";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .1368
FT /organism="Potato virus Y"
FT /specific_host="Nicotiana tabacum"
FT /lab_host="Nicotiana tabacum"
FT /isolate="Henan8"
FT /mol_type="genomic RNA"
FT /country="China:Henan"
FT /db_xref="taxon:12216"
FT CDS <1. .>1368
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="CAJ87179.1"
FT /translation="SNADNFWKGLDGNWAQMRYPTDHTCVAGLPVEDCGRVAAIMTHSI
FT LPCYKITCPTCAQQYANLPASDLLKILHKHASDGLNRLGADKDRFVHVKKFLTILEHLT
FT EPVDLSLEIFNEVFKSIGEKQQSPFKNLNILNNFFLKGKENTAREWQVAQLSLLELARF
FT QKNRTDNIKKGDISFFRNKLSAKANWNLYLSCDNQLDKNANFLWGQREYHAKRFFSNYF
FT EEIDPAKGYSAYENRLHPNGTRKLAIGNLIVPLDLAEFRRKMKGDYKRQPGVSKKCTSS
FT KDGNYVYPCCCTTLDDGSAVESTFYPPTKKHLVIGNSGDQKYVDLPKGNSEMLYIARQG
FT FCYINIFLAMLINISEEDAKDFTKKVRDMCVPKLGTWPTMMDLATTCAQMKIFYPDVHD
FT AELPRILVDHETQTCHVVDSFGSQTTGYHILKASSVSQLILFANDELESDIKHYRVG"
FT mat_peptide 1. .1368
FT /product="helper component-proteinase, HC-Pro"
XX
SQ Sequence 1368 BP; 439 A; 252 C; 309 G; 368 T; 0 other;
am236852 Length: 1368 19-MAR-2008 Type: N Check: 8377 ..
1 tcgaatgccg acaatttttg gaagggattg gacggcaatt gggcacaaat
51 gagatatcct acagatcata catgtgtggc aggcttacca gttgaagact
101 gtggcagagt tgcagcgata atgacacaca gtattttacc gtgctataag
151 ataacctgcc ctacctgtgc ccaacaatat gccaacttgc cagccagtga
201 cttacttaag atattacaca agcacgcaag tgatggtcta aatcgattgg
251 gggcagacaa agatcgcttt gtgcatgtca aaaagttctt gacaatctta
301 gagcacttga ctgaaccggt tgatctgagt ctagaaattt tcaatgaagt
351 attcaagtct ataggggaga agcaacaatc acctttcaaa aacctgaata
401 ttctgaataa tttctttttg aaaggaaagg aaaatacagc tcgtgaatgg
451 caggtggctc aattaagctt acttgaactg gcaagattcc aaaagaacag
501 aacggataat atcaagaaag gagacatctc gttctttagg aataaactat
551 ctgccaaagc aaattggaac ttgtatctgt catgtgataa ccagctggat
601 aagaatgcaa acttcctgtg gggacagagg gaatatcatg ctaagcgatt
651 tttctcgaac tatttcgagg aaattgatcc agcgaagggc tattcagcat
701 acgaaaatcg tttgcatccg aatgggacaa gaaaacttgc aattggaaac
751 ttaattgtac cacttgatct ggctgagttt aggcggaaga tgaaaggtga
801 ttataaaaga cagccagggg tgagtaagaa gtgcacgagc tcaaaggatg
851 gaaactacgt gtatccctgt tgttgcacta cacttgatga tggctcagct
901 gttgaatcaa cattttaccc gccaactaag aagcacctcg taataggtaa
951 tagtggcgac caaaagtatg ttgacttacc aaaagggaat tctgagatgt
1001 tatatattgc caggcaaggc ttctgttaca ttaacatttt cctcgcgatg
1051 ttgattaaca ttagtgagga agatgcaaag gatttcacta agaaggttcg
1101 tgacatgtgt gtgccaaagc ttggaacctg gccaaccatg atggatctgg
1151 ctacaacttg tgctcaaatg aaaatattct accctgatgt tcatgatgca
1201 gaactgccta gaatactagt cgatcacgaa acgcagacat gccatgtggt
1251 tgactcgttt ggctcacaaa caactgggta tcatattttg aaagcatcta
1301 gcgtgtccca acttattttg tttgctaatg atgagttaga atctgatata
1351 aaacattata gagttggt