Sequence of DPV Tomato yellow leaf curl China virus
Tomato yellow leaf curl China virus -[Y264] complete genome, isolate Y264
ACC No: AM261326
Dated: 2006-05-03 | Length: 2741 | CRC: -559906145
ID AM261326 standard; circular genomic DNA; VRL; 2741 BP.
XX
AC AM261326;
XX
SV AM261326.1
XX
DT 03-MAY-2006 (Rel. 87, Created)
DT 03-MAY-2006 (Rel. 87, Last updated, Version 1)
XX
DE Tomato yellow leaf curl China virus -[Y264] complete genome, isolate Y264
XX
KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AC4 protein; AV1 gene; AV2 gene;
KW coat protein; pre-coat protein; replication enhancer protein;
KW replication-associated protein; transcription enhancer protein.
XX
OS Tomato yellow leaf curl China virus -[Y264]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2741
RA Zhou X.;
RT ;
RL Submitted (29-APR-2006) to the EMBL/GenBank/DDBJ databases.
RL Zhou X., Zhejiang University, Institute of Biotechnology, No.268, Kaixuan
RL Road, Hangzhou, Zhejiang, 310029, CHINA.
XX
RN [2]
RA Liu Y., Zhou X.;
RT "Identification and prevention of tobacco-infectiong viruses in Yunnan";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2741
FT /organism="Tomato yellow leaf curl China virus -[Y264]"
FT /isolate="Y264"
FT /mol_type="genomic DNA"
FT /country="China:Yunnan"
FT /isolation_source="tobacco"
FT /virion
FT /db_xref="taxon:382677"
FT CDS 128. .475
FT /gene="AV2"
FT /product="pre-coat protein"
FT /protein_id="CAK02778.1"
FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVEKTYSPDTLGYDLIRDL
FT ISVIRARDYGEASRRYSHFHSRLEGASPAELRQPIHGPCCCPHCPRHQKTNVVQQAHVS
FT EAHNVPDVQKP"
FT CDS 288. .1058
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="CAK02779.1"
FT /translation="MAKRPADIVISTPASKVRRRLNFDSPYMGRAAAPTVRVTRRQMWS
FT NRPMYRKPIMYRMYRSPDVPKGCEGPCKVQSYEARHDVSHTGKVICVTDVTRGNGITHR
FT VGKRFCVKSIYVIGKIWMDENIKVKNHTNTVMFFLVRDRRPSGTPMDFQQVFNCYDNEP
FT STATVKNDLRDRFQVRRKFYSTVTGGQYASKEQTLVKRFMRVNTYVTYNHQEQAKYENH
FT TENALLLYMVCTHASNPVYATLKVRIYFYDSQMN"
FT CDS complement(1055. .1459)
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="CAK02780.1"
FT /translation="MDSRTGELFTAAQTENGVYIWTVKNPLYFKITKHHKRPFMMKHGI
FT ITLQVQFNYNLRKALGIHKCFLTCKIWTRLHPQTLRFLRVFKYQCIKYLDSLGVISINN
FT VIRAISHVLYNVLEGTIDVIENHDIKFNIY"
FT CDS complement(1200. .1604)
FT /gene="AC2"
FT /product="transcription enhancer protein"
FT /protein_id="CAK02781.1"
FT /translation="MRSSSPSKSHSTPVPIKVQHRIAKKATRRRRVDLPCGCSYFISIN
FT CHDYGFTHRGTIHCSSNREWRLYLDGQKSPLFQDNQAPQKTVHDEARHNHITSTVQLQP
FT EESVGDTQMFSNLQNLDSFTSSDLAFLKSI"
FT CDS complement(1516. .2592)
FT /gene="AC1"
FT /product="replication-associated protein"
FT /protein_id="CAK02782.1"
FT /translation="MPQPKKFIINAKNYFLIYPHCSLTKEEALSQILNLKTPTNKLFIR
FT ICREQHEDGNPHLHILIQFEGKFKCQNNRFFDLTSPHRSAHFHPNIQGAKSSTDVKAYM
FT EKDGDLLDHGIFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFH
FT NLNSNLDRIFTPPIEEYISPFSSSSFDQVPEELEEWAVENVVSAAARPLRPISIVIEGD
FT SRTGKTMWARSLGQHNYLCGHLDLSPKVYNNDAWFNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKNWAIKNAIFVTLQEPL
FT YSGSYQGATPNRQEGNQT"
FT CDS complement(2142. .2435)
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="CAK02783.1"
FT /translation="MGILTCISSSNSKVNSNAKTTDSSISHPHIGQHISIRTFRELKAQ
FT QMLKHTWKKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY"
XX
SQ Sequence 2741 BP; 745 A; 532 C; 595 G; 869 T; 0 other;
am261326 Length: 2741 03-MAY-2006 Type: N Check: 9502 ..
1 accggatggc cgcgattttt ttaaaagtgg tccccgcagt cacgtgtgtc
51 caatctaggc cgctcctcaa agcttaatta tgacatggtc ccctataaaa
101 cttagccccc aagtattaac gttaaacatg tgggatcctt tgctcaatga
151 gttccctgaa accgtacatg gttttaggtg tatgttagca attaaatatt
201 tgcagttagt tgaaaaaacc tattcccccg atacattagg ctacgattta
251 attcgtgatt taatctcggt tattcgtgct agagactatg gcgaagcgtc
301 ccgccgatat agtcatttcc actcccgcct cgaaggtgcg tcgccggctg
351 aacttcgaca gcccatacat gggccgtgct gctgccccca ctgtccgcgt
401 caccagaaga caaatgtggt ccaacaggcc catgtatcgg aagcccataa
451 tgtaccggat gtacagaagc cctgatgttc caaagggttg tgaaggccca
501 tgtaaagttc aatcctatga ggctcgtcat gatgtttccc atactggtaa
551 ggttatatgt gtgaccgatg ttacccgtgg taatggaatt actcatcgtg
601 ttggtaagag gttttgtgtt aaatccattt acgtaattgg gaagatatgg
651 atggacgaga atattaaagt gaagaatcat acaaatacgg ttatgttttt
701 tctggttaga gatcgccgtc caagtggcac acctatggat tttcaacaag
751 tgtttaattg ttatgacaat gagcctagca ctgctactgt aaaaaacgac
801 ttaagggatc gttttcaagt gcgtcgtaaa ttctattcca cggttacagg
851 ggggcaatac gcctctaagg agcagacgtt ggtcaagaga tttatgcgtg
901 ttaataccta tgtcacctac aatcatcaag aacaggcgaa atatgagaat
951 catacagaga atgctttgtt gttgtatatg gtttgcactc atgcaagtaa
1001 tcctgtatat gcgactttga aagttcgcat ctatttttat gattcgcaaa
1051 tgaattaata aatattaaat tttatatcat gattttcaat tacatcaatt
1101 gttccttcta gtacattgta taatacatga gatattgccc taattacatt
1151 gttgatgcta atcacgccta aactatctaa atatttaata cattgatatt
1201 taaatactct taagaaacgc aaggtctgag gatgtaaacg agtccagatt
1251 ttgcaggtta gaaaacattt gtgtatcccc aacgctttcc tcaggttgta
1301 gttgaactgt acttgtaatg tgattatgcc gtgcttcatc atgaacggtc
1351 ttttgtggtg cttggttatc ttgaaataaa ggggattttt gaccgtccag
1401 atataaacgc cattctctgt ttgagctgca gtgaatagtt ccccggtgcg
1451 tgaatccata atcgtgacag tttatagaaa tgaaatatga acagccacag
1501 ggtagatcaa ctcgtctacg tctggttgcc ttcttggcga ttcggtgttg
1551 caccttgata ggaaccggag tagagtggct cttggagggt gacgaagatc
1601 gcattcttta tagcccagtt tttaagtgct gagtttttct cctcgtccaa
1651 gaattcttta tagctggaat tgggtcctgg attgcagagg aagatagtgg
1701 gaattccgcc tttaatttga actggtttcc cgtatttggt gttgctttgc
1751 cagtcccttt gggcccccat gaattcttta aagtgcttta agtaatgcgg
1801 atctacgtca tcaatgacgt tgaaccaggc atcattattg tacacttttg
1851 gactcaaatc taaatgacca cataaataat tatgttgtcc taaagacctg
1901 gcccacatcg tcttccccgt cctgctatca ccctctatga ctatacttat
1951 tggtctcaat ggccgcgcag cggcactgac aacattttct acagcccatt
2001 cttcaagttc ttcgggaact tgatcaaaag aagaagaaga aaatggagaa
2051 atatattcct ctattggagg agtaaaaatc ctatctaaat tactatttaa
2101 attatgaaat tgtaaaacaa aatctttagg ggccttctcc ctcaatatat
2151 tgagggccga agctttggac cctgaattga ttgcctcggc atatgcgtcg
2201 ttggcagatt ggcaacctcc tcgagccgat cttccatcga tctggaaaat
2251 tccatgatca agcaagtctc cgtctttttc catgtatgct ttaacatctg
2301 ttgagctttt agctccctga atgttcggat ggaaatgtgc tgacctatgt
2351 ggggatgtga gatcgaagaa tcggttgttt tggcatttga atttaccttc
2401 gaattggatg aggatatgca ggtgaggatt cccatcttcg tgttgttccc
2451 tgcagatgcg tatgaataat ttgttagttg gggtttttag gtttaatatt
2501 tgggaaagtg cttcttcctt tgtgagtgag cagtgtggat atatgaggaa
2551 gtagttcttg gcatttatta taaatttctt tggttgaggc atgttgactt
2601 ggtcaatcgg gtcctctcaa acttggctat gcaatcgggg aatgggtcct
2651 tatttatagt tgaggaccta aatggcataa atgtaaataa ttaaaagaaa
2701 ttcaaaattc aaaatccaaa agcggccatc cgtataatat t