Sequence of DPV Tomato leaf curl New Delhi virus
Tomato leaf curl New Delhi virus-[Pumpkin:New Delhi], segment DNA-B, complete sequence, isolate 2
ACC No: AM286435
Dated: 2007-07-10 | Length: 2694 | CRC: -1725826657
ID AM286435; SV 1; circular; genomic DNA; STD; VRL; 2694 BP.
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AC AM286435;
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DT 10-JUL-2007 (Rel. 92, Created)
DT 10-JUL-2007 (Rel. 92, Last updated, Version 1)
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DE Tomato leaf curl New Delhi virus-[Pumpkin:New Delhi], segment DNA-B,
DE complete sequence, isolate 2
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KW BC1 gene; BV1 gene; movement protein; nuclear shuttle protein.
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OS Tomato leaf curl New Delhi virus-[Pumpkin:New Delhi]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2694
RA Maruthi M.N.;
RT ;
RL Submitted (10-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL Maruthi M.N., Natural Resources Institute, University of Greenwich, Central
RL Avenue, Chatham Maritime, Kent, ME4 4TB, UNITED KINGDOM.
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RN [2]
RA Maruthi M.N., Rekha A.R., Muniyappa V.;
RT "Pumpkin yellow vein mosaic disease is caused by two distinct
RT begomoviruses; complete viral sequences and comparative transmission by an
RT indigenous and the introduced B-biotype Bemisia tabaci";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .2694
FT /organism="Tomato leaf curl New Delhi virus-[Pumpkin:New
FT Delhi]"
FT /segment="DNA-B"
FT /specific_host="pumpkin"
FT /isolate="2"
FT /mol_type="genomic DNA"
FT /country="India:New Delhi"
FT /virion
FT /db_xref="taxon:393597"
FT CDS 442. .1248
FT /gene="BV1"
FT /product="nuclear shuttle protein"
FT /protein_id="CAL15169.1"
FT /translation="MAFPSPYPTPRRSGYSFNRTYNGNKSFRLWKSRKNQNWKRYRSTH
FT SIARSPTELFGEPISKQYTRKEICETQEGSEYLLHNNRYMTSYVSYPAKTRTGTNNRVR
FT SYIKLKSLNLSGTFAVRKSDVMTEALQTNGLYGVMSVVVVRDKSPKIYSATQPLIPFVE
FT LFGSVNACRGSLKVAERHHERFVLLNQTSIVVNTPHSNAIKKFCIRNCIPRTYTTWATF
FT KDDEEDSCTGLYSNTLRNAIILYYVWLSDVPSQVDLYSNVILNYIG"
FT CDS complement(1306. .2151)
FT /gene="BC1"
FT /product="movement protein"
FT /protein_id="CAL15170.1"
FT /translation="MSIGNEGMGMGVGGYIQSERVEYALTNDAAEVTLSFPSMFEQKIS
FT QLRNRCMKIDHVVLEYRSQVPINAVGHVVIEIHDMRLTEGDTKQAEFTIPIKCNCNLHY
FT YSSSFFSLKDKNPWRVEYRVENTNVVNGVHFCKMLGKLKLSSAKHSTDVEFRPPKIEIQ
FT TKEFTVNDIDFWSVGSKPQTRRLVDGSRLMGHSSRSLRVPYLAIGPNESWASRSEIGLS
FT SVTSRPYKNLSGLDDSAIDPGPSASQAGSITREEIADIITKTVEQCIKSNVNAPVSKGV
FT "
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SQ Sequence 2694 BP; 748 A; 628 C; 516 G; 802 T; 0 other;
am286435 Length: 2694 10-JUL-2007 Type: N Check: 9835 ..
1 accgaaaggc cgcgaaaatt tttcccccct atcctgaccg ttgcttcgta
51 atcattgcac gccgttaccc gtccgatttg caacacgtgt atcccactaa
101 tagactttat gcaaataaat gtctgaactg cgtctcttta atgcatatgt
151 ggtccccata tgtcttttcg tacatctatt atgtgcgtat atggtccccc
201 cgcactatat aaagtcgttc acatatatca aaatgccttc tttgctatat
251 gtattttgat cggtcgagat caaaattaat atgttgggaa catgccagtc
301 gtccgatctt atgagatatg ctttaattca aacaatactt gtttgaattt
351 tatccacccc ttaaaatact aatttataaa attgctacat atatgacatt
401 acatggtttt gtcgttgcca cacatttccc atccccgcta aatggctttt
451 ccttctcctt atcccacacc tcgccgttcc ggttactctt tcaacagaac
501 atacaacggt aacaagagtt tccgcttgtg gaagtcccgg aagaatcaaa
551 actggaagcg ctatcgcagt acccattcca tagcacgctc tccaacagaa
601 ctgtttggcg agccaatctc caaacaatat acgcgtaagg aaatctgtga
651 aacacaggag gggtcggagt atcttctcca caacaatcgc tacatgacat
701 catatgtctc ttatccggcc aagaccagaa ctggaacgaa caaccgcgtt
751 cgttcctata tcaagttaaa gagtttgaac ttatccggga catttgccgt
801 tcgaaagtcg gatgtgatga cggaagctct gcagacaaac ggtctttacg
851 gggtgatgtc tgtagttgtg gtccgcgata aatctccaaa gatttattct
901 gcgacgcaac ccttgatacc gtttgttgaa ctgtttggat cagttaatgc
951 atgcagggga agtctgaaag tggcagaacg ccaccatgaa cgtttcgtac
1001 tgctgaatca aacatccatc gtcgtcaata ccccacattc caacgctatc
1051 aagaaattct gcattcgtaa ctgcatccca agaacttaca caacctgggc
1101 tacgttcaag gacgatgaag aagatagctg tactggacta tattctaaca
1151 ccctccgaaa tgcaattatt ttgtattatg tatggttaag cgatgtaccc
1201 tcacaagtcg atctatatag caatgtaatt cttaattaca ttggataatg
1251 tattgaagat gcacaaggaa cattttattc atgaataaat ttgacttaaa
1301 atttattaca cgcccttgga tactggagca tttacattag attttataca
1351 ttgctctaca gtcttcgtaa ttatgtccgc aatctcttcc ctcgtaatac
1401 tccccgcctg tgatgccgat ggacctgggt cgattgccga atcgtccagt
1451 ccgctcaggt ttttgtatgg tctgctggtg acggacgaaa gtccgatctc
1501 cgatctgctt gcccatgact cgttcggacc tattgccaga tatggtactc
1551 tcaacgatct tgaactatgt cccattaacc ttgaaccatc gacaagacgc
1601 cttgtttgtg gtttggaacc cacagaccag aaatcaatgt cgttaacggt
1651 gaattccttg gtctgtattt ctatcttcgg tggtcggaat tctacgtcag
1701 tggaatgttt tgccgacgac agcttcaatt tccccagcat cttacagaaa
1751 tgcaccccat tcacgacgtt tgtgttctca accctgtatt ccactctcca
1801 aggattctta tccttgagag agaagaatga ggaagagtag tagtgcaggt
1851 tgcagttgca tttgattgga attgtgaatt ctgcttgttt cgtgtctcct
1901 tccgtcaatc tcatgtcgtg tatctctatc acgacatgac caacagcatt
1951 aatcggaacc tgactgcgat attccagtac tacgtgatct attttcatgc
2001 atctattcct cagctggcta atcttctgct cgaacattga aggaaatgac
2051 aaggtgacct ctgcagcatc gtttgtaagc gcgtactcaa cgcgctcaga
2101 ttggatatac ccaccaacgc ccatacccat accttcattt cctattgaca
2151 tattggccgc gcagcgcaac acccactgaa acacaggagg atagactacg
2201 atcaaagaaa ccccaacgaa gaagaaaccc tagcaaacaa cgaagttgtt
2251 ttgcaaagga cggaggcaga tggttttata attcttttgc atgtcatgtc
2301 tatgtcatac caaataccct aaaatgaacg gcacatattt ttctacgaaa
2351 aaggagttgt gcctgtatat ttaccaattg acatatatca tggatatatg
2401 ggaagcccaa tttaggttaa ttgggctgag ttataaattc agaagaagcc
2451 catggaaatg gcccagcatg aagtccatct ttgaaacgac gtcgcgtgtg
2501 tctcttatgt tagccaaagt tagagagaag caggagtttc tctctctaga
2551 catcatattg gcgtccctca tctttctcat atatttggtg tctggagtcc
2601 tatatatagg taagacacca tatggcatta ttgtaatttt gttaacaaaa
2651 ttactttaat tcaaattccc tatagcggcc tttcgtataa tata