Sequence of DPV Bean yellow mosaic virus

Bean yellow mosaic virus partial gene for polyprotein, genomic RNA, isolate Palampur, partial CP region

ACC No: AM398198

Dated: 2006-09-07 | Length: 822 | CRC: 1172317608

                
ID   AM398198; SV 1; linear; genomic RNA; STD; VRL; 822 BP.
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AC   AM398198;
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DT   07-SEP-2006 (Rel. 89, Created)
DT   07-SEP-2006 (Rel. 89, Last updated, Version 1)
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DE   Bean yellow mosaic virus partial gene for polyprotein, genomic RNA, isolate
DE   Palampur, partial CP region
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KW   coat protein; CP gene; polyprotein.
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OS   Bean yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-822
RA   Singh A.K.;
RT   ;
RL   Submitted (05-SEP-2006) to the EMBL/GenBank/DDBJ databases.
RL   Singh A.K., Floriculture, Institute of Himalayan Bioresource Tech.,
RL   IHBT(CSIR) Floriculture Division Palampur, Himachal Pradesh 176 061, INDIA.
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RN   [2]
RA   Singh A.K., Ram R., Zaidi A.A.;
RT   "Variability assessment of coat protein gene in different Indian isolates
RT   of Bean yellow mosaic virus";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .822
FT                   /organism="Bean yellow mosaic virus"
FT                   /isolate="Palampur"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Palampur"
FT                   /isolation_source="Gladiolus"
FT                   /virion
FT                   /db_xref="taxon:12197"
FT   CDS             <1. .822
FT                   /product="polyprotein"
FT                   /protein_id="CAL38797.1"
FT                   /translation="SDQEQLNAGENKKDKERKNEENPDKDSEGQSIRQIVPDRDVNAGT
FT                   VGTFSVPRLKKIAGKLNIPKIGGKIVLNLDHLLEYNPPQDGISNVIATQAQFEAWYNGV
FT                   KQAYEVGDSQMGIILNGLMVWCIENGTSGDLQGEWTMMDGEEQVTYPLKPILDNAKPTF
FT                   RQIMSHFSEVAEAYIEKRNATERYMPRYGLQRNLTDYGLARYAFDFYKLTSRTPVRARE
FT                   AHMQMKAAAVRGKSTRLFGLDGNVGTDEENTERHTAGDVNRDMHTMLGVRI"
FT   mat_peptide     <1. .819
FT                   /product="coat protein"
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SQ   Sequence 822 BP; 287 A; 144 C; 207 G; 184 T; 0 other;

am398198 Length: 822  07-SEP-2006  Type: N  Check: 6015  ..

       1  tctgaccaag aacaactcaa tgcaggtgag aataagaagg acaaagagag
      51  aaagaatgaa gaaaatcccg ataaggactc tgaggggcag agtatcaggc
     101  aaatagtacc agacagagat gtgaatgcag gaactgttgg aacattttca
     151  gttcctaggc tcaagaaaat agcaggaaaa ctaaatattc ccaagattgg
     201  tggaaagata gtgctcaatt tagaccactt gctggaatat aacccaccac
     251  aggatggcat ttcaaatgtc atagcaacac aagcacagtt tgaagcgtgg
     301  tataatggtg tcaagcaagc gtatgaggtt ggggattcac aaatgggaat
     351  tattttgaat ggccttatgg tgtggtgcat agaaaatggc acatcaggag
     401  atttacaagg tgaatggaca atgatggatg gagaggaaca ggtgacatac
     451  cctctaaaac ccatcttgga caatgcaaag ccaacattcc gccaaataat
     501  gtcgcatttc tcagaagttg cagaagccta cattgaaaag aggaatgcaa
     551  cagagagata catgccacgg tatggacttc aaaggaactt gactgattat
     601  ggtttggcta ggtatgcttt tgacttctac aaactgactt caagaactcc
     651  tgtgcgtgct agagaagcac acatgcaaat gaaggcggca gcagttagag
     701  gcaagtcaac tagattattt ggacttgatg gcaatgttgg aacagacgag
     751  gagaacacag aaagacacac agcaggagat gtcaatcgtg atatgcacac
     801  catgcttggt gttcgtattt ag