Sequence of DPV East African cassava mosaic virus
East African cassava mosaic virus DNA-B, clone 20-ug1a8
ACC No: AM502344
Dated: 2007-06-17 | Length: 2761 | CRC: -1636554113
ID AM502344; SV 1; circular; genomic DNA; STD; VRL; 2761 BP.
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AC AM502344;
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DT 17-JUN-2007 (Rel. 92, Created)
DT 17-JUN-2007 (Rel. 92, Last updated, Version 1)
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DE East African cassava mosaic virus DNA-B, clone 20-ug1a8
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KW BC1 gene; BV1 gene.
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OS East African cassava mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2761
RA Stanley J.;
RT ;
RL Submitted (16-MAR-2007) to the EMBL/GenBank/DDBJ databases.
RL Stanley J., Department of Disease and Stress Biology, John Innes Centre,
RL Colney Lane, Norwich NR74 7UH, UNITED KINGDOM.
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RN [2]
RA Sserubombwe W.S., Briddon R.W., Baguma Y.K., Ssemakula G.N., Bull S.,
RA Bua A., Otim-Nape G.W., Stanley J.;
RT "Diversity of begomoviruses associated with mosaic disease of cultivated
RT cassava (Manihot esculenta Cranz) and its wild relative (Manihot glaziovii)
RT in Uganda.";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .2761
FT /organism="East African cassava mosaic virus"
FT /mol_type="genomic DNA"
FT /country="Uganda:Nakasongola"
FT /clone="20-ug1a8"
FT /virion
FT /db_xref="taxon:62079"
FT CDS 359. .1135
FT /gene="BV1"
FT /product="BV1 protein"
FT /protein_id="CAM59441.1"
FT /translation="MYSVYRRGYKTPYRSLYGARVTPYVYRKTAVKQTSKSRVPRKLAY
FT ESPKCLYTRRSLEDIHNGASLKLPQQGDYTSYVTLPCRGIDGNGGRSVDHIKLLSLRVS
FT GTVNISQCGGDDNMGERTTMRGIFFMACLVDKKPFVPEGVSILPTFNELFGEYESVYGM
FT PRLKENVRHRYRVIGTSKLYITTDEEHIQKPFSLRRRLSGGKYPMWSSFKDVDNSSTGG
FT NYKNINKNAILASYVWVSLCPSTCDVYSQFVLNYVG"
FT CDS complement(1264. .2187)
FT /gene="BC1"
FT /product="BC1 protein"
FT /protein_id="CAM59442.1"
FT /translation="MDNQFTVTDNSYINSKRTEYALTNDAAPINLQFPSSFEQATMRLK
FT GRCMKIDHIIIEYRNQVPFNAIGSVIVEIKDNRVSLEDAAQAAFTFPIACNVDLHYFSS
FT TYFSISEPSPWRIMYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG
FT YTKDCIDFWSVEKGETRRRLLNPTPHTHSPRPITHRPITILPGETWATKSQIGLPSSSG
FT PARLDHFRSQSMRMDPSTTPTDLDNDSTEYPYQTLHRLHTPELDPGDSVSQTPSDSVSR
FT KDLETLLESTINKCLIKIKSEAPRQL"
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SQ Sequence 2761 BP; 764 A; 447 C; 744 G; 806 T; 0 other;
am502344 Length: 2761 17-JUN-2007 Type: N Check: 217 ..
1 accggatggc cgcgcccgaa aaaagcaggg tgaccccaca atggccccca
51 cgcactaagt aatgtcagcc aatcatgtgc aagactggaa gacgcggtag
101 ttacgtattg atgagtaagt ggtcccgacg cactaatgtt gacaggcaat
151 ttgattgcta tgtgtgtatc atattcatat aggtgtgtta ctggttaatc
201 taaagttagg tgatggggcc tatcataaaa acgcaataca taggtacgta
251 tgtacatatt gattatattt ttgtttgcgg atatatgatc cgccacgtgt
301 ataatggata tggaatgtcc tataaatatt tggcatgtct ctcgtccgtt
351 agtgcaagat gtattctgtt tacaggcgtg ggtataagac tccgtatagg
401 agtctgtatg gcgctcgtgt aacaccatat gtttatcgta agactgctgt
451 taaacagacg tctaaatctc gtgtaccgcg aaagttagcg tatgaatcgc
501 caaaatgtct atatacgcga cgctcattgg aggatatcca taatggggcg
551 tccttaaagt tgcctcaaca gggggattat acgtcctacg tgacactccc
601 atgtcgaggt atcgatggta atgggggtag gtctgttgat catataaaat
651 tattaagctt gagggtgtct gggaccgtca atatcagtca atgcggtggt
701 gatgataata tgggagagag aacgaccatg aggggtattt ttttcatggc
751 ttgtcttgtt gataagaaac ctttcgttcc agagggggtt agtatattgc
801 cgacgtttaa tgagttgttc ggggaatatg aatccgtgta tggcatgcct
851 aggttgaagg aaaacgttcg tcaccgttat cgcgtgattg ggacgtcgaa
901 attatatata acgaccgatg aagagcacat ccagaagcca tttagtttac
951 gtcgaagact aagtggaggg aaatatccta tgtggtcgtc gttcaaggat
1001 gtggataata gtagtacagg tgggaactat aaaaatataa ataagaacgc
1051 tatactagct agttatgtgt gggtatcgct atgtccgtcc acgtgtgatg
1101 tgtattccca gtttgtactt aattacgtcg gttgataata aaacgagata
1151 agtgtgttga tattaattat gtttggacta acgaaatatg agatgaacat
1201 caatggaaag cacatatagt gtgattatgt agcgaatcaa atatcgtaca
1251 tatcaagtat ttattacaat tgcctgggtg cttcggattt tattttgatg
1301 agacacttgt ttatggtact ctcaagcagt gtctcgaggt cctttctgga
1351 tactgagtcg gatggggtct gtgataccga gtccccgggg tccaattcgg
1401 gtgtgtgtaa tctgtgtagt gtctggtaag gatattctgt ggagtcgttg
1451 tctaagtccg ttggtgttgt cgatgggtcc attctcatgg actgtgaacg
1501 aaagtggtcc agccttgctg ggccggatga gctgggtagc ccaatctgag
1551 acttcgtggc ccatgtttct ccagggagaa tggtgatggg cctgtgggtt
1601 atgggtcgtg gactatgagt atgtggagtt ggatttagta atctccgtcg
1651 tgtttctcct ttttccacgg accagaagtc tatgcaatcc tttgtgtagc
1701 ccttggataa tatgttaatt gttgggggtt tgaaacgtat gtccgtggaa
1751 tgtttggccg atgataatcg gagcttggcc ttgatggatg cgaatttcac
1801 gccttctatg acgtttgagt cttcgactct gtacatgatt ctccaagggg
1851 agggttctga aatcgaaaaa tatgtagacg agaagtagtg gaggtctacg
1901 ttgcaagcta ttgggaaagt gaatgctgct tgagcagcgt cttcaaggct
1951 gacgcgattg tctttgattt ctacgataac cgacccaatt gcgttaaatg
2001 ggacctggtt tcggtattca attataatgt ggtcgatttt catacatcgg
2051 cctttgagtc gcatggtcgc ctgctcgaat gagctcggaa attggagatt
2101 gattggtgca gcatcgttgg ttaatgcgta ctctgtgcgt ttgctgttga
2151 tgtaactatt gtctgtgacg gtgaattggt tgtccattct atgaatgaaa
2201 aaaacaaggg ttagtaaacg gagagaatag atgtataaaa gtcagagcaa
2251 gtttataaaa tgtcttgtat acatggaagc atatatgcat tgggtatcga
2301 taataacaca cgaaagcaga acaaggatca tatatgtata attggccgcg
2351 cagcggattg gaagtcagac aaatcggcga acaaataaaa aagtcaaatg
2401 aagttatggg atggaaacaa cttacggaag cacctaggaa gcagtcggga
2451 ttgaattctt gttataagtg gagaaaacaa agaaataaaa gtatgacgga
2501 ttggtataga aaggaaagtg agcagatgat atgcgccgtg tcgttaaatg
2551 agatgttatt gggtgtttat ataggcgttg ataagcgaga cgtggtagag
2601 agagaaagaa gagagaggcg agagcaatcg ggggacactc aaagtctgta
2651 gcaatcgggg gaaagggggg caatttatat gatgccccct aaatggcatt
2701 tatgtaatat cctcattgaa tgtgacaggc aaacgtggaa agcggccatc
2751 cgtataatat t