Sequence of DPV Potato mop-top virus

Potato mop-top virus 8K protein gene for cysteine rich protein, genomic RNA, isolate 2505

ACC No: AM503594

Dated: 2009-03-23 | Length: 494 | CRC: -414489299

                
ID   AM503594; SV 1; linear; genomic RNA; STD; VRL; 494 BP.
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AC   AM503594;
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DT   23-MAR-2009 (Rel. 100, Created)
DT   23-MAR-2009 (Rel. 100, Last updated, Version 1)
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DE   Potato mop-top virus 8K protein gene for cysteine rich protein, genomic
DE   RNA, isolate 2505
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KW   8K protein gene; cysteine rich protein.
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OS   Potato mop-top virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Pomovirus.
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RN   [1]
RP   1-494
RA   Aura J.M.;
RT   ;
RL   Submitted (22-MAR-2007) to the EMBL/GenBank/DDBJ databases.
RL   Aura J.M., Department of Applied Biology, University of Helsinki, PO Box
RL   27, 00014 Helsinki, FINLAND.
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RN   [2]
RA   Latvala-Kilby S., Aura J.M., Pupola N., Hannukkala A., Valkonen J.P.T.;
RT   "Genetic variability of Potato mop-top virus in Finland and Latvia";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .494
FT                   /organism="Potato mop-top virus"
FT                   /isolate="2505"
FT                   /mol_type="genomic RNA"
FT                   /country="Finland"
FT                   /db_xref="taxon:37128"
FT   CDS             23. .229
FT                   /transl_except=(pos:23. .25,aa:Met)
FT                   /gene="8K protein"
FT                   /product="cysteine rich protein"
FT                   /note="mutation resulting in Val working as starting codon"
FT                   /protein_id="CAM78275.1"
FT                   /translation="MERRFIVYYNCSDCACGCYVSSLLTVFGACVNICVCIVFFILVYL
FT                   SGCYNMRVLGFIRVCIYLYKLCR"
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SQ   Sequence 494 BP; 130 A; 85 C; 110 G; 169 T; 0 other;

am503594 Length: 494  23-MAR-2009  Type: N  Check: 2396  ..

       1  aaaataatat gttacttaag ttgtggaaag acgatttatc gtttactata
      51  attgcagtga ctgtgcttgt gggtgctatg ttagctcgtt attaacagtg
     101  ttcggtgctt gtgtgaatat atgtgtttgt attgtatttt tcattctcgt
     151  gtatttgtcc ggttgttata atatgagggt cctaggtttt atacgggtat
     201  gcatatacct atacaaatta tgccgttgac actacgttaa gtgttagtgc
     251  ttacaggact tcggtccgtg gttcacttaa atcgaaccat tggagtaatc
     301  caacgttaat actacgttaa gtattggtgc ttccagggct aaaccgtggt
     351  tcaccttaat cgaaccagtc tcatttgaga caaaactgac ttcctagctg
     401  tttttgagat aattccaaaa aactcattat ccggcttagg gaagagcggc
     451  cagttgctgc tgcgatcaag acacgatcgt tcaaaagggt gcaa