Sequence of DPV Tomato leaf curl Antsiranana virus
Tomato leaf curl Antsiranana virus cp, v2, rep, c2, c3 and c4 genes, isolated in Miandrivazo, Madagascar
ACC No: AM701767
Dated: 2007-07-26 | Length: 2774 | CRC: 1831602673
ID AM701767; SV 1; linear; genomic DNA; STD; VRL; 2774 BP.
XX
AC AM701767;
XX
DT 26-JUL-2007 (Rel. 92, Created)
DT 26-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE Tomato leaf curl Antsiranana virus cp, v2, rep, c2, c3 and c4 genes,
DE isolated in Miandrivazo, Madagascar
XX
KW c2 gene; c3 gene; c4 gene; coat protein; cp gene; rep gene;
KW replication associated protein; v2 gene.
XX
OS Tomato leaf curl Antsiranana virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2774
RA Lefeuvre P.;
RT ;
RL Submitted (25-APR-2007) to the EMBL/GenBank/DDBJ databases.
RL Lefeuvre P., AMIS, CIRAD - UMR PVBMT, 7 Chemin de l'IRAT, Ligne Paradis,
RL Saint Pierre, 97410, REUNION.
XX
RN [2]
RA Lefeuvre P., Martin D.P., Hoareau M., Naze F., Becker N., Delatte H.,
RA Reynaud B., Lett J.M.;
RT "Begomovirus "melting pot" in the South West Indian Ocean Islands:
RT molecular diversity and evolution through recombination";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2774
FT /organism="Tomato leaf curl Antsiranana virus"
FT /mol_type="genomic DNA"
FT /country="Madagascar:Menabe, Miandrivazo"
FT /isolation_source="Lycopersicum esculentum"
FT /virion
FT /db_xref="taxon:439424"
FT CDS 159. .509
FT /transl_table=1
FT /gene="v2"
FT /product="V2 protein"
FT /protein_id="CAM91941.1"
FT /translation="MWDPLLNEFPDSVHGFRCMLAVKYLQAVEETYEPNTLGHDLIRDL
FT ICVIRARDYVEATRRYNYFHSRLESASKAELRQPVYQPCCCPHCPRHKQTSLMDVQAHV
FT SKAQDVQNVQKP"
FT CDS 319. .1095
FT /transl_table=1
FT /gene="cp"
FT /product="coat protein"
FT /protein_id="CAM91942.1"
FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPFTSRAVVPTVPGTSRRRSW
FT TYRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRDDVKHTGIARCISDVTRGSGITH
FT RVGKRFCIKSVYLLGKIWMDENIKKQNHTNQVMFFLVRDRRPYGSAPMDFGQVFNMFDN
FT EPATATVKNDLRDRFQVMRKFHATVVGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE
FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN"
FT CDS complement(1092. .1496)
FT /transl_table=1
FT /gene="c3"
FT /product="C3 protein"
FT /protein_id="CAM91943.1"
FT /translation="MDLRTGELITAAQAQSGVFIWEIQNPLYFKILYHESRPFNMNQDI
FT ILIQIRFNHNLRKALAIHRCFLNFKVWTSLRPQTGRFLRVFRTQVLKYLDRLGVVSINS
FT VIRAVDYVLYDVLINTLQVTENHEIKFNIY"
FT CDS complement(1237. .1644)
FT /transl_table=1
FT /gene="c2"
FT /product="C2 protein"
FT /protein_id="CAM91944.1"
FT /translation="MQPSSPSTSHCSQIPIKVKHRIAKKRPIRRKRIDLNCGCSYYLHI
FT NCINHGFTHRGTHHCSSSTEWRFYLGDSKSPVFQNPLPREPPIQHEPRHHINPDTVQPQ
FT LEEGIGDSQMFSQLQGLDELTPSDWSFLKSV"
FT CDS complement(1553. .2629)
FT /transl_table=1
FT /gene="rep"
FT /product="replication associated protein"
FT /protein_id="CAM91945.1"
FT /translation="MRTPRFKIQAKNIFLTYPKCSLTKEHLLSFLQNLSLPTNPKYIKI
FT CLEHHQNGEPHLHALIQFEGKLTCTNNRLFDCVHPSSSTCFHPNIQGAKSSSDVKSYLD
FT KDGDTLEWGEFQIDGRSARGGQQSANDAYAKALNTGSKSEALRVIRELAPKDFVLQFHN
FT LNSNLDRIFQEPPAPYVSPFLSSSFDQVPEELEVWVAENVMGSAARPWRPMSIVIEGDS
FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWFNVIDDVDPHYLKHFKEFMGAQRDWQ
FT SNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNAPLKDWALKNATFVTLHQPLF
FT SNTNQGQTPHSEEETHST"
FT CDS complement(2173. .2475)
FT /transl_table=1
FT /gene="c4"
FT /product="C4 protein"
FT /protein_id="CAM91946.1"
FT /translation="MGNLICMPLFNSRENSRAPTIASSIAYTQAVAPVSTPTYRELSPA
FT LMSSPIWTRTEIPWSGESFRSMDDLQGGDNSQPMTLTPKHLTQAVSQRLLESLGS"
XX
SQ Sequence 2774 BP; 735 A; 557 C; 653 G; 829 T; 0 other;
am701767 Length: 2774 26-JUL-2007 Type: N Check: 9736 ..
1 accggatggc cgcgcccccg aaaaaaaaag acgcgcccga aaaagaaagg
51 tggtccccgc acactagact atgtcagcca atcagaaagc cgtggaaagc
101 ttagttattt gttttttgtc cttatatact tggtccccaa gtattggtct
151 ttgtcagcat gtgggatcca cttttgaacg agttcccaga ctctgttcac
201 gggtttcgtt gtatgcttgc tgttaaatat ttgcaggccg ttgaggaaac
251 ctacgagccc aatacattgg gccacgatct aatccgtgat cttatttgtg
301 ttatcagggc ccgtgactat gtcgaagcga cccggagata taattatttc
351 cactcccgtc tcgaaagtgc gtcgaaggct gaacttcgac agcccgttta
401 ccagccgtgc tgttgtcccc actgtcccag gcacaagcag acgtcgctca
451 tggacgtaca ggcccatgta tcgaaagccc aggatgtaca gaatgtacaa
501 aagccctgat gttccaaggg gttgtgaagg cccatgtaag gtccagtctt
551 atgagcagag ggatgatgtc aagcataccg gtattgctcg ttgtattagt
601 gatgttacgc gtggttcggg tattacccat agagttggca agaggttttg
651 tattaagtcc gtttatcttt taggtaagat ctggatggat gaaaatatta
701 agaagcagaa tcatactaat caggttatgt tttttcttgt tcgtgataga
751 aggccctatg gctcagcccc aatggatttt ggacaggttt ttaacatgtt
801 tgataatgag cctgctacag ctacggtgaa gaatgatttg agagacagat
851 ttcaagttat gcgcaaattt catgcaactg ttgttggtgg accctcagga
901 atgaaggagc aggcattagt taagagattt tttaggatta atagtcatgt
951 aacttataat catcaggagg cagcgaagta tgagaatcat actgagaatg
1001 ctttgttgtt gtatatggca tgtactcatg cttcgaatcc agtgtatgct
1051 actcttaaga tacggatcta tttttacgat tcggtcagca attaataaat
1101 attgaatttt atttcatgat tctccgtaac ttggagtgta tttataagta
1151 catcgtacaa tacataatca actgctcgta ttacagaatt aattgaaact
1201 acacctaatc tatctaaata ctttaaaact tgagtcctaa acactcttaa
1251 gaaacgacca gtctgagggc gtaagctcgt ccagaccttg aagttgagaa
1301 aacatctgtg aatcgccaat gccttcctca agttgtggtt gaaccgtatc
1351 tggattaata tgatgtcttg gttcatgttg aatgggcggc tctcgtggta
1401 gaggattttg aaatacaggg gattttgaat ctcccagata aaaacgccac
1451 tctgtgcttg agctgcagtg atgagttccc cggtgcgtaa atccatggtt
1501 gatgcagttg atgtgtagat agtaggagca gccgcaattt aggtctatgc
1551 gcttacgtcg aatgggtctc ttcttcgcta tgcggtgttt gaccttgatt
1601 ggtatttgag aacaatggct ggtggagggt gacgaaggtt gcattcttga
1651 gtgcccagtc ctttagtggt gcattctttt cctcgtctag gaactcttta
1701 tacgaggatg ttggtcctgg attgcaaagg aagatagtgg gaattccgcc
1751 tttaatttga attggcttcc cgtactttgt gttgctttgc cagtcccttt
1801 gggctcccat gaattctttg aagtgcttta aataatgcgg gtccacgtca
1851 tcaatgacgt tgaaccatgc atcgttacta tacacctttg ggctaagatc
1901 aagatgacca cacaaatagt tgtggggtcc caatgatctg gcccacattg
1951 tcttccccgt ccgactatca ccctcaatca caatactcat cggtctccaa
2001 ggccgcgcag cggaacccat gacgttctca gccacccaga cttcaagttc
2051 ttccggaact tgatcaaaag aagaagaaag aaaaggagaa acataaggag
2101 ccggaggctc ctgaaaaatc ctatctaaat tactatttaa attatgaaac
2151 tgtaaaacaa aatcttttgg agctaactcc ctaatgactc taagagcctc
2201 tgacttactg cctgtgttaa gtgctttggc gtaagcgtca ttggctgact
2251 gttgtccccc ccttgcagat cgtccatcga tctgaaactc tccccactcc
2301 agggtatctc cgtccttgtc cagataggac ttgacatcag agctggactt
2351 agctccctgt atgttggggt ggaaacaggt gctactgctt gggtgtacgc
2401 aatcgaagag gcgattgttg gtgcacgtga gttttccctc gaattgaata
2451 agggcatgca gatgaggttc cccattctgg tggtgttcaa ggcagatttt
2501 gatatattta gggttagttg gtaatgaaag gttttgtaag aatgatagaa
2551 ggtgttcttt ggtaagagaa cacttaggat aagtgaggaa aatgtttttg
2601 gcttgaattt taaaacgtgg agttctcatg ttgacttggt caattggaga
2651 cactcgcttg gagtatctcc ggtgaattgg agacaatata tagtgtctcc
2701 aaatggcatt tctgtaataa ccctcattgt aatttgaatt tcaaaattca
2751 aaaagcggcc atccgtataa tatt