Sequence of DPV Dasheen mosaic virus

Dasheen mosaic virus partial CP gene for coat protein, genomic RNA, isolate NiNG3

ACC No: AM910399

Dated: 2009-01-13 | Length: 975 | CRC: -1945340776

                
ID   AM910399; SV 1; linear; genomic RNA; STD; VRL; 975 BP.
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AC   AM910399;
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DT   03-DEC-2008 (Rel. 98, Created)
DT   13-JAN-2009 (Rel. 99, Last updated, Version 2)
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DE   Dasheen mosaic virus partial CP gene for coat protein, genomic RNA, isolate
DE   NiNG3
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KW   .
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OS   Dasheen mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-975
RA   Ramsell J.N.E.;
RT   ;
RL   Submitted (14-NOV-2007) to the EMBL/GenBank/DDBJ databases.
RL   Ramsell J.N.E., Dept of Plant Biol and Forest Genetics, Swedish Univ of
RL   Agricultural Sciences, P.O. Box 7080, SE-750 07 Uppsala, SWEDEN.
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RN   [2]
RA   Reyes G., Ramsell J.N., Nyman M., Kvarnheden A.;
RT   "Sequence characterization of Dasheen mosaic virus isolates from cocoyam in
RT   Nicaragua";
RL   Arch. Virol. 154(1):159-162(2009).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .975
FT                   /organism="Dasheen mosaic virus"
FT                   /isolate="NiNG3"
FT                   /mol_type="genomic RNA"
FT                   /country="Nicaragua"
FT                   /db_xref="taxon:29271"
FT   CDS             <1. .975
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CAP40310.1"
FT                   /translation="DAGNQNNTNKTTPATGGGNNTNTNTNTGNNTNTNTSTGNNTNTNT
FT                   NTNTNTTNDNPPPPPLAAPKASETPANKQVVPTTSDKGKEIIKDVNAGTSGTYSVPRLN
FT                   KITNKMNLPLVKGKCILNLNHLIEYKPEQRDIFNTRATHTQFEVWYNAVKREYELEDEQ
FT                   MHIVMNGFMVWCIDNGTSPDINGAWVMMDGNDQIEYPLKPIVENAKPTLRQIMHHFSDA
FT                   AEAYIELRNAEKPYMPRYGLIRNLRDASLARYAFDFYEVNSKTPVRAREAVAQMKAAAL
FT                   SNVTTRLFGLDGNVSTSSENTERHTAKDVTPNMHTLLGVAPPQ"
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SQ   Sequence 975 BP; 332 A; 225 C; 204 G; 214 T; 0 other;

am910399 Length: 975  13-JAN-2009  Type: N  Check: 1313  ..

       1  gatgcaggaa atcagaacaa taccaataaa acaacccctg caactggtgg
      51  tggtaacaac acaaatacca acaccaatac tggtaacaac acaaacacca
     101  ataccagtac tggtaacaat acaaacacca acaccaacac taataccaac
     151  acaaccaatg ataatcctcc accgccacca ctggcggcac caaaagcttc
     201  agagacgcca gcaaacaagc aggtagtccc cacaacaagt gataaaggta
     251  aggagattat taaagatgtc aatgctggca caagtggaac atactctgta
     301  cctcgactaa acaaaatcac aaataaaatg aacttgcctt tagtcaaagg
     351  caagtgcatt ttaaatttaa atcatttgat cgagtacaaa cctgagcagc
     401  gtgacatatt taacaccaga gccacccaca cacagtttga ggtctggtac
     451  aatgctgtca agagggaata tgagctcgag gatgagcaga tgcacattgt
     501  tatgaatggt ttcatggttt ggtgcatcga taatggaaca tcacccgata
     551  ttaatggggc ttgggtgatg atggacggaa atgaccaaat tgaatacccg
     601  ttaaaaccaa ttgtagagaa tgcaaaaccc accttgcgtc agattatgca
     651  tcacttttct gacgcagcag aggcttatat tgaactgaga aatgcggaga
     701  aaccgtacat gcctaggtac ggtcttattc gcaacttacg tgatgcaagt
     751  cttgcccggt atgctttcga cttttatgaa gtcaactcaa agacaccggt
     801  gcgagcaagg gaggcagttg cgcagatgaa ggccgctgca ctctctaacg
     851  ttaccactag gctgtttgga ttggatggta acgtttcaac ttcaagcgag
     901  aacactgaaa ggcacactgc taaggatgtc acaccaaata tgcacacttt
     951  acttggtgta gcgcctccgc agtaa