Sequence of DPV Tobacco mottle virus
Tobacco mottle virus RNA-dependent RNA polymerase gene, partial cds; and long-distance movement protein and cell-to-cell movement protein genes, complete cds.
ACC No: AY007231
Dated: 2003-12-04 | Length: 2159 | CRC: -1900345060
!!NA_SEQUENCE 1.0
ID AY007231 standard; genomic RNA; VRL; 2159 BP.
XX
AC AY007231;
XX
SV AY007231.1
XX
DT 06-SEP-2000 (Rel. 65, Created)
DT 04-DEC-2003 (Rel. 78, Last updated, Version 2)
XX
DE Tobacco mottle virus RNA-dependent RNA polymerase gene, partial cds; and
DE long-distance movement protein and cell-to-cell movement protein genes,
DE complete cds.
XX
KW .
XX
OS Tobacco mottle virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Umbravirus.
XX
RN [1]
RP 1-2159
RX MEDLINE; 21488924.
RX PUBMED; 11601910.
RA Ryabov E.V., Robinson D.J., Taliansky M.;
RT "Umbravirus-encoded proteins both stabilize heterologous viral RNA and
RT mediate its systemic movement in some plant species";
RL Virology 288(2):391-400(2001).
XX
RN [2]
RP 1-2159
RA Ryabov E.V., Robinson D.J., Taliansky M.;
RT ;
RL Submitted (17-AUG-2000) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, Scottish Crop Research Institute, Invergowrie, Dundee,
RL Scotland DD2 5DA, United Kingdom
XX
DR GOA; Q9DX75.
DR GOA; Q9DX77.
DR SPTREMBL; Q9DX75; Q9DX75.
DR SPTREMBL; Q9DX76; Q9DX76.
DR SPTREMBL; Q9DX77; Q9DX77.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2159
FT /db_xref="taxon:136138"
FT /mol_type="genomic RNA"
FT /organism="Tobacco mottle virus"
FT CDS <1. .1087
FT /codon_start=2
FT /db_xref="GOA:Q9DX77"
FT /db_xref="SPTREMBL:Q9DX77"
FT /note="ORF2"
FT /product="RNA-dependent RNA polymerase"
FT /protein_id="AAG02571.1"
FT /translation="LYRYPCVAKGFNAVETGEIIAKKWQMFKHPVCVGLDAKRFDQHIS
FT MPALKFTHGIYRKFIKNAEFSNLLDKMLINHGVGTAKDGRVKYKVRGCRMSGDMDTALG
FT NCTIMVLMTRNLCLKLNIPHELMNNGDDCIVMFDQQYLQVFNSAVKPYFKSLGFNIKVE
FT EPRYTLERVEFCQTHPVYDGEKWRMVRLLTAIAKDCATVINWEQLTAWWAAIGKCGLAV
FT LSGMPIYTNFYRWLIRIGKVGGVERHPVWKNEGLRWYTMGLDLSGQQVITDEARLSFAA
FT AFGVTPQMQEALEGIYDELGEPGVMAMNPNIFESAVVEIPDRISCEYFHPDIIDALSLQ
FT DYHATMSVSNITADLLCAATA"
FT CDS 1281. .1985
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9DX76"
FT /note="ORF3"
FT /product="long-distance movement protein"
FT /protein_id="AAG02572.1"
FT /translation="MASVVNVNLNSKSGLQTRTTGRPLRGGNYERTPGKQSRSSHPRQR
FT KCAGNTHPAATPRHSKPAVQGTKEVPPHSPHRRNVVHREGGYCFDAPRAGRLSRRGGGL
FT HSRQPTPQSQLNGREGESRAQWRAEVDGLLSPLLDTIVGHGWNPTKVFLRGIQLGRVYT
FT RNKRGEPILNVSDVAPKRGEQVSQLPATKPQITPSLPTQGPANATPIGPPAEVPQRRDV
FT EQVCTTCDGNKY"
FT CDS 1297. .2061
FT /codon_start=1
FT /db_xref="GOA:Q9DX75"
FT /db_xref="SPTREMBL:Q9DX75"
FT /note="ORF4"
FT /product="cell-to-cell movement protein"
FT /protein_id="AAG02573.1"
FT /translation="MSTSIVRADCKQELLDALYGEVTTKELQESNLGVLTPVRGSARVT
FT LTPLLPPDTQSRLSKVLRKYRPTRHTGGMLFIERVVIVLTPHVPDDYPGAVEVYIHDNL
FT LPNLNSMGERVRVELNGGPKLMAFYPHYSIPLSDMVGIRPRSFCVVSSLVESTLGTSGA
FT SLFSMYLMWHPNVESRSHNYLPQSPRLHPVCRHRVQQTLHLLDHRQKYLSGAMSNRFAL
FT PVMGTNTSATEEDGVETDHAIEVSGSNGLGKS"
XX
SQ Sequence 2159 BP; 559 A; 548 C; 578 G; 474 T; 0 other;
AY007231 Length: 2159 December 9, 2003 08:57 Type: N Check: 7699 ..
1 attatacagg tatccctgcg tcgctaaggg attcaatgct gtggaaactg
51 gggagatcat agccaagaag tggcagatgt ttaagcaccc agtatgtgtt
101 ggacttgatg ccaaacgatt cgaccaacac atctccatgc cagcgttgaa
151 attcacccat ggcatctatc gcaagttcat taagaatgct gaattctcca
201 acttgctcga taagatgtta ataaaccatg gggtgggcac tgccaaggat
251 ggtagggtca agtacaaggt taggggctgt cgcatgagtg gcgatatgga
301 tacggccctt gggaattgca ccatcatggt gttgatgacc cgcaacttgt
351 gcttaaaact caacatccca catgagctta tgaacaatgg agacgactgc
401 attgtaatgt ttgaccagca gtatcttcag gtgttcaact ctgcagtaaa
451 gccctacttc aagtccctgg gtttcaatat caaagtggag gagcccaggt
501 acacccttga gcgagttgaa ttttgccaga cccacccggt atacgatggg
551 gaaaagtggc gcatggtgag gctgctaaca gctatagcca aagactgtgc
601 caccgtcatc aactgggagc aattgacagc gtggtgggcc gctataggca
651 agtgcggatt ggcagtcctt tctggaatgc cgatttacac caatttctac
701 cgctggttga ttcgcattgg caaagtaggg ggcgtggaga ggcatcctgt
751 gtggaaaaat gaagggttgc gttggtacac aatggggctt gatttgtccg
801 gacaacaggt gatcaccgat gaggcgaggt taagttttgc cgccgccttt
851 ggggtcaccc cacagatgca agaagccctg gaggggatat atgatgaatt
901 gggtgagccc ggtgtcatgg ccatgaaccc aaacatcttc gagagtgcgg
951 ttgtagaaat accggaccgt atctcttgtg agtacttcca ccctgacata
1001 atagatgccc ttagtctcca agactaccat gccacgatgt ctgtcagcaa
1051 catcactgct gacctgctat gcgctgcgac agcataagtc agcgcttaag
1101 ggatgccggg gcactcgccc ttccatggat tgacatggag agtccacgga
1151 ccataaaaaa aaaactttag agggtggctc ccttctgaat attagccctg
1201 gtgaaatcct accagctttg cgtcccagtc ccccgtagcc ttaccccgag
1251 tagcctagga caatgctcgg agggtaacct atggcaagtg ttgtaaatgt
1301 caacctcaat agtaagagcg gactgcaaac aagaactact ggacgccctc
1351 tacggggagg taactacgaa agaactccag gaaagcaatc taggagttct
1401 cacccccgtc agaggaagtg cgcgggtaac actcaccccg ctgctacccc
1451 cagacactca aagccggctg tccaaggtac taaggaagta ccgccccact
1501 cgccacacag gcggaatgtt gttcatagag agggtggtta ttgttttgac
1551 gccccacgtg ccggacgatt atcccggcgc ggtggaggtt tacattcacg
1601 acaacctact ccccaatctc aactcaatgg gcgagagggt gagagtagag
1651 ctcaatggag ggccgaagtt gatggccttt tatccccact actcgatacc
1701 attgtcggac atggttggaa tccgaccaag gtctttctgc gtggtatcca
1751 gcttggtcga gtctacactc ggaacaagcg gggcgagcct attctcaatg
1801 tatctgatgt ggcacccaaa cgtggagagc aggtctcaca actacctgcc
1851 acaaagcccc agattacacc cagtctgccg acacagggtc cagcaaacgc
1901 tacacctatt ggaccaccgg cagaagtacc tcagcggcgc gatgtcgaac
1951 aggtttgcac tacctgtgat gggaacaaat actagtgcaa ctgaggagga
2001 tggtgtggaa accgaccacg ccattgaggt ctccggatca aacggtctcg
2051 gcaagagcta gcccgagtaa ctgagggcgg gagaaggcac actcccggtt
2101 agcacccggt gtggaagtaa atgtccacca aggtcccgca cgcctgcctt
2151 ctacgtcag