Sequence of DPV Ryegrass mosaic virus

Ryegrass mosaic virus strain Czech coat protein gene, partial cds.

ACC No: AY014275

Dated: 2001-07-31 | Length: 1126 | CRC: 1717881734

                !!NA_SEQUENCE 1.0
ID   AY014275   standard; RNA; VRL; 1126 BP.
XX
AC   AY014275;
XX
SV   AY014275.1
XX
DT   25-JAN-2001 (Rel. 66, Created)
DT   31-JUL-2001 (Rel. 68, Last updated, Version 2)
XX
DE   Ryegrass mosaic virus strain Czech coat protein gene, partial cds.
XX
KW   .
XX
OS   Ryegrass mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1126
RX   MEDLINE; 21332848.
RX   PUBMED; 11439115.
RA   Xu J., Schubert J., Altpeter F.;
RT   "Dissection of RNA-mediated ryegrass mosaic virus resistance in fertile
RT   transgenic perennial ryegrass (Lolium perenne L.)";
RL   Plant J. 26(3):265-274(2001).
XX
RN   [2]
RP   1-1126
RA   Xu J., Schubert J., Altpeter F.;
RT   ;
RL   Submitted (24-NOV-2000) to the EMBL/GenBank/DDBJ databases.
RL   AG Gentransfer, Molecular Cell Biology, Institute of Plant Genetics and
RL   Crop Plant Research, Correnstr. 3, Gatersleben D06366, Germany
XX
DR   SPTREMBL; Q99A91; Q99A91.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1126
FT                   /db_xref="taxon:40666"
FT                   /virion
FT                   /organism="Ryegrass mosaic virus"
FT                   /strain="Czech"
FT   CDS             <1. .>1126
FT                   /codon_start=2
FT                   /db_xref="SPTREMBL:Q99A91"
FT                   /product="coat protein"
FT                   /protein_id="AAG50359.1"
FT                   /translation="HAPYLAEAALKALYTGKDPDAELIAIYERAMLNTPPTEDRPTKVV
FT                   HEANVTAASSTATQTSTTSPTVTSTSGASTSSSSGTTSAPLASTTPPASVTPTPSVGTT
FT                   TPTTPTVRAANLRTSQDTERQRRMRESQLNVRGENDDEDVPAASEFALPRVPTLGAKIR
FT                   VPKFKGAIVLNKDHLIKYTPDQRDLSNTRATQEQFEKWYSGVRNEIEKTDDEMALLLNG
FT                   FMVWCMENGTSPDLSGSWTMMEGEEQVSYPLEPFCRHAQPTLRSVMAHFSDAATAYVVL
FT                   RNQKSRYMPRYGLKRGLNDYSLAPYAFDFYEITSTSPLRAREAHAQMKAAAIRGKASRM
FT                   FGLDGNVSAQSENTERHTVEDVNTRVHSLSGANML"
XX
SQ   Sequence 1126 BP; 339 A; 275 C; 277 G; 235 T; 0 other;

AY014275  Length: 1126  December 21, 2001 15:42  Type: N  Check: 1511  ..

       1  gcacgcacca tacctagctg aagccgcctt gaaggcgctg tacactggta
      51  aggacccaga tgcggaattg attgccatct atgagcgggc tatgttgaac
     101  acaccaccaa cggaagatcg accgacaaaa gtggtgcacg aagctaacgt
     151  caccgccgca tcttcaacag caactcagac ttctacgaca tcaccaacag
     201  tcacatctac tagtggtgcg tcaacttcgt catcgagcgg aacaacatct
     251  gcgccactag caagcacaac tccaccagca tctgtgacgc cgacaccatc
     301  agtaggaact actacgccaa caacaccaac cgtacgagct gcgaacttgc
     351  gaacctcaca ggacacggag aggcaaagac gaatgcgaga gagccagctc
     401  aatgtgagag gcgagaacga cgatgaagat gtgccagcag catcagagtt
     451  tgcattacca cgggtgccaa cattaggagc aaagattcga gtgccaaagt
     501  ttaaaggtgc catagtactc aacaaggatc atctgattaa atacacacct
     551  gatcagcgtg atttatccaa cacacgcgcg acacaagaac aatttgagaa
     601  atggtactca ggtgtgagaa atgaaattga gaagacggat gatgaaatgg
     651  cactattgtt gaatggtttc atggtttggt gtatggaaaa tggaacatcc
     701  ccagatttat ccgggtcttg gactatgatg gaaggtgagg agcaggtatc
     751  gtatccactc gaaccattct gtcgccatgc acagccaacg ttgcggtcag
     801  taatggctca ttttagtgat gccgcaacag catatgtagt cctacgcaat
     851  cagaagtcta gatatatgcc acggtatgga cttaaaagag gcttgaacga
     901  ctattcattg gcaccgtacg ctttcgactt ctatgaaata acttccacat
     951  cgcctcttcg ggctagagag gcgcatgcgc aaatgaaagc cgcagccatc
    1001  aggggcaagg catctaggat gtttggtctt gacggcaatg tatcagccca
    1051  atcggagaac acagagaggc atacagttga ggatgttaac actcgagttc
    1101  actcactctc gggtgcgaat atgctg