Sequence of DPV Papaya mosaic virus
Papaya mosaic virus clone YcY-15.1 12 kDa protein gene, partial cds; and 7 kDa protein and coat protein genes, complete cds.
ACC No: AY017187
Dated: 2002-01-02 | Length: 1180 | CRC: 528780526
!!NA_SEQUENCE 1.0
ID AY017187 standard; RNA; VRL; 1180 BP.
XX
AC AY017187;
XX
SV AY017187.1
XX
DT 02-JAN-2002 (Rel. 70, Created)
DT 02-JAN-2002 (Rel. 70, Last updated, Version 1)
XX
DE Papaya mosaic virus clone YcY-15.1 12 kDa protein gene, partial cds; and 7
DE kDa protein and coat protein genes, complete cds.
XX
KW .
XX
OS Papaya mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potexvirus.
XX
RN [1]
RP 1-1180
RA Noa-Carrazana J.C., Silva-Rosales L.;
RT "First report of a Mexican isolate of papaya mosaic virus in papaya and
RT cucubirts";
RL Unpublished.
XX
RN [2]
RP 1-1180
RA Noa-Carrazana J.C., Silva-Rosales L.;
RT ;
RL Submitted (21-DEC-2000) to the EMBL/GenBank/DDBJ databases.
RL Ingenieria Genetica, Cinvestav IPN, Km 9.6 Libramiento Norte Carr.
RL Irapuato-Leon, Irapuato, Gto Apdo. 629 CP 36500, Mexico
XX
FH Key Location/Qualifiers
FH
FT source 1. .1180
FT /country="Mexico"
FT /db_xref="taxon:12181"
FT /note="isolated from papaya"
FT /organism="Papaya mosaic virus"
FT /isolate="Yucatan"
FT /clone="YcY-15.1"
FT CDS <1. .316
FT /codon_start=2
FT /note="ORF3"
FT /product="12 kDa protein"
FT /protein_id="AAG52894.1"
FT /translation="FLTPPPDHSKSVLAVAVGLGLALVIHFSLSYKLPTPGDNIHNLPF
FT GGYYKDGTKTVHYNSPGRAPKISGPAPILMVFALIFALHVLRKRDVIDRPHHSGCPHCS
FT "
FT CDS 252. .458
FT /codon_start=1
FT /note="ORF4"
FT /product="7 kDa protein"
FT /protein_id="AAG52895.1"
FT /translation="MFSGKEMLLIGLTTLVALIALNWLQTDAERGCVVLLSGHSSTLKG
FT QRCELLHPDAIKAMSAHLKGLRY"
FT CDS 489. .1136
FT /codon_start=1
FT /note="ORF5; CP"
FT /product="coat protein"
FT /protein_id="AAG52896.1"
FT /translation="MSKSSMSSSNTPFPPITSEQMSTLKVDPTSNLLPSPEQLKSVSAL
FT MVAAKVPAASVTTVAMELVNFCYDNGSSAYTTVVGPSSVPEVSLAQLASIVKASGTSLR
FT KFCRYFAPIIWNIRTDKTPPANWEAAGYKPNAKFAAFDFFDGVENPAAMQPPTGLIRSP
FT TQEERIANATNKQVHLFQAAAQDNNFASNSAFITKGQISGSSPTIQFLPPPE"
XX
SQ Sequence 1180 BP; 297 A; 337 C; 246 G; 300 T; 0 other;
AY017187 Length: 1180 January 15, 2002 16:51 Type: N Check: 5350 ..
1 tttcctcaca ccacctcccg accacagtaa gtcagtgtta gctgtagccg
51 taggtttagg tttagcttta gttatacatt tttctctgtc atacaaattg
101 cctacgcctg gtgacaacat tcacaatctc ccattcggtg ggtattacaa
151 ggacggaaca aagaccgttc actacaactc acccggccgc gcacctaaaa
201 tatccgggcc tgctccgatc cttatggtgt tcgccctgat attcgctctc
251 catgttctcc ggaaaagaga tgttattgat cggcctcacc actctggttg
301 ccctcattgc tcttaactgg cttcagactg atgcggagag agggtgtgtt
351 gtacttcttt ccggacacag ctccaccctg aagggtcaaa ggtgtgaatt
401 gttgcacccg gacgcaataa aggcgatgtc agcccatcta aaggggctta
451 ggtattagct aatactttga aagtttagag tttagtcgat gtcaaagtca
501 agtatgtcct catcaaacac tcccttccca ccaatcacct ctgaacagat
551 gtccactctc aaagtggacc ccacttccaa cctgttgcct tcacccgagc
601 aattgaagtc tgtatccgct ctaatggttg ctgccaaggt tccagctgct
651 agtgtcacca cagtggcaat ggaattggtc aacttctgtt atgataacgg
701 atcgagtgct tacaccacgg ttgttggccc atcatctgtg cctgaggtct
751 ccttggcaca gctagcaagc atcgtgaagg cctctggcac ttcactgaga
801 aaattctgcc gatactttgc accaattatc tggaacataa ggacggacaa
851 aactccgcca gcgaactggg aggctgctgg gtacaaaccc aacgccaagt
901 ttgccgcctt cgactttttc gatggtgtcg aaaacccagc cgccatgcaa
951 cctcccactg gactcattag atcacccact caagaggaga ggattgccaa
1001 cgccaccaac aaacaagtcc atctgttcca agcggcagct caggataata
1051 actttgctag caactctgcc ttcatcacca aaggccagat atcaggatcc
1101 tcccccacaa ttcaatttct tccacccccc gaataaacac gtacttgacc
1151 cagcccgttg tttagcacta tttgaagggc