Sequence of DPV Papaya ringspot virus

Papaya ringspot virus TN coat protein gene, partial cds.

ACC No: AY027812

Dated: 2001-03-20 | Length: 1130 | CRC: 1742390753

                !!NA_SEQUENCE 1.0
ID   AY027812   standard; RNA; VRL; 1130 BP.
XX
AC   AY027812;
XX
SV   AY027812.1
XX
DT   20-MAR-2001 (Rel. 67, Created)
DT   20-MAR-2001 (Rel. 67, Last updated, Version 1)
XX
DE   Papaya ringspot virus TN coat protein gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1130
RA   Wang J.J., Yeh S.D.;
RT   "Analyses of the Coat Protein Genes of Papaya Ringspot Virus W Type
RT   Isolates from Different Areas of Taiwan";
RL   Unpublished.
XX
RN   [2]
RP   1-1130
RA   Wang J.J., Yeh S.D.;
RT   ;
RL   Submitted (21-FEB-2001) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, National Chung Hsing University, 250 Kuo-Kuang Road,
RL   Taichung 402, Taiwan, R.O.C.
XX
DR   SPTREMBL; Q98WK3; Q98WK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1130
FT                   /country="Taiwan: Tainan"
FT                   /db_xref="taxon:12205"
FT                   /note="type: W"
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="TN"
FT                   /specific_host="sponge gourd"
FT                   /lab_host="Cucumis metuliferus (Naud.) Mey. Acc. 2459"
FT   CDS             <1. .924
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q98WK3"
FT                   /product="coat protein"
FT                   /protein_id="AAK17013.1"
FT                   /translation="SRSTDNHQLACGSNTHVFHQSKNEAVDAGLNEKLKEKEKQKEKEK
FT                   DKQKDKDNDGACDGNDVSTSTKTGERDRDVNAGTSGTFTVPRIKSFTDKMILPRIKGKT
FT                   VLNLNHLLQYNPQQIDISNTRATQSQFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIEN
FT                   GTSPDISGVWVMMDGETQVDYPIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYM
FT                   PRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREAHMQMKAAALRNTNRRMFGMDGSLS
FT                   NREENTERHTVEDVNRDMHSLLGMRN"
FT   3'UTR           925. .1030
XX
SQ   Sequence 1130 BP; 358 A; 213 C; 275 G; 284 T; 0 other;

AY027812  Length: 1130  December 21, 2001 15:42  Type: N  Check: 6617  ..

       1  tcgagaagca ctgataatca tcagttagcc tgcggcagta acacccatgt
      51  gtttcaccag tccaaaaatg aagctgtgga tgctggtctg aatgagaagc
     101  tcaaagaaaa agaaaaacag aaagaaaaag aaaaggataa acaaaaagat
     151  aaagataatg atggagcatg tgacggaaat gatgtgtcaa ctagcacaaa
     201  aactggagag agggatagag acgtcaatgc tggaactagt ggaaccttca
     251  ctgttccgag gataaagtca tttactgata agatgatttt accaagaatt
     301  aaaggaaaaa ctgtccttaa tttgaatcat cttcttcagt ataatccgca
     351  acaaattgac atctcaaaca ctcgtgccac tcaatctcaa tttgagaagt
     401  ggtatgaggg agtgagaaat gattatggcc ttaatgataa tgaaatgcaa
     451  gtgatgttaa atggtttgat ggtttggtgt atcgaaaatg gtacatctcc
     501  agacatatct ggtgtctggg tgatgatgga tggggagacc caagttgatt
     551  atcccattaa acctttgatc gaacacgcaa ctccttcatt taggcaaatc
     601  atggctcact tcagtaacgc ggcagaggca tacatcgcaa agaggaatgc
     651  aactgagagg tacatgccgc ggtatggaat caagagaaat ttgactgaca
     701  ttagtctcgc tagatatgct ttcgatttct atgaggtgaa ttcgaaaaca
     751  cctgataggg ctcgtgaagc tcatatgcag atgaaggctg cagcgctacg
     801  caatactaat cgcagaatgt ttggaatgga cggcagtctc agtaacaggg
     851  aagaaaacac ggagagacac acggtagaag atgtcaacag agacatgcac
     901  tctctcctgg gtatgcgcaa ttgaatactc gcgctagtgt gtgcgtcggg
     951  cctggctcga ccctgtttca ccttataata ctatgtaagc attagaatac
    1001  agtgtggctg cgccaccgct tctattttat agtgagggta gccctccgtg
    1051  cttttagtgt tattcgagtt ctctgagtct ccatacaatg tgggtggccc
    1101  acgcgctatt cgagcctctt ggaatgagag