Sequence of DPV Elderberry latent virus

Elderberry latent virus putative coat protein (CP) gene, complete cds.

ACC No: AY038066

Dated: 2009-01-10 | Length: 1017 | CRC: 20524709

                
ID   AY038066; SV 1; linear; genomic RNA; STD; VRL; 1017 BP.
XX
AC   AY038066;
XX
DT   31-JUL-2001 (Rel. 68, Created)
DT   10-JAN-2009 (Rel. 98, Last updated, Version 2)
XX
DE   Elderberry latent virus putative coat protein (CP) gene, complete cds.
XX
KW   .
XX
OS   Elderberry latent virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC   Carmovirus.
XX
RN   [1]
RP   1-1017
RA   Kinard G., Guaragna M.A., Jordan R.;
RT   "Characterization and genome organization of four unique viruses infecting
RT   geranium and their assignment to a new provisional genus in the
RT   Tombusviridae family (#VP64.13)";
RL   (in) Unknown A. (Eds.);
RL   XITH INTERNATIONAL CONGRESS OF VIROLOGY:415-415;
RL   Unknown Publisher (1999)
XX
RN   [2]
RP   1-1017
RA   Jordan R.;
RT   ;
RL   Submitted (05-JAN-2001) to the EMBL/GenBank/DDBJ databases.
RL   Floral & Nursery Plants Research Unit, USDA, ARS, US National Arboretum,
RL   10300 Baltimore Ave, Bldg 010A, Room 238, Beltsville, MD 20705, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1017
FT                   /organism="Elderberry latent virus"
FT                   /isolate="EBV (ATCC-PV522)"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:167018"
FT   gene            1. .1017
FT                   /gene="CP"
FT   CDS             1. .1017
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="putative coat protein"
FT                   /db_xref="GOA:Q911J7"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="UniProtKB/TrEMBL:Q911J7"
FT                   /protein_id="AAK74061.1"
FT                   /translation="MANKSPVVVAAAGRGELWAVKLSSLGWRSLSKAQKASARAAGIGA
FT                   VPQSAIIPRTTRLIAGNPTNSRRTRDAPGNAQKSMTVFKSEFLGELHADNTIRSYKLDP
FT                   RNVRTFPHISDLARGFNKYKFTDVKVRYSSKVQDSECGLTIAFSADSSDPAPRGKFDLY
FT                   ALGSKVEGAAHKNLLYTVPVDKGQRFLRDGEGDNAKEVDAGVIYVLMDGAHDTRAGELF
FT                   LEVTVVLSQPTYNQRSTQYISGTEHRGGPNYVNITKSANTMTLTFQAAGTFLLCSYSSP
FT                   LEKVGRLSLADADQSQVDSANNSSNIIEAVVTTPGGSIVYYFKSREQMSFRAYVGRM"
XX
SQ   Sequence 1017 BP; 234 A; 279 C; 292 G; 212 T; 0 other;

ay038066 Length: 1017  10-JAN-2009  Type: N  Check: 827  ..

       1  atggccaata aaagtccagt cgtggttgca gcggccgggc gcggtgagct
      51  gtgggcagtg aaactgtcga gtttggggtg gcggagtctg agcaaagccc
     101  aaaaggccag cgctcgggcg gcgggcattg gggctgtgcc tcagtccgcc
     151  attattcccc gcacaactcg gttaatagct ggcaacccta cgaactctcg
     201  ccgcacccgg gacgctcctg gcaacgcgca gaagagcatg actgtcttca
     251  agtcggagtt cttaggtgag ctccatgcgg acaataccat tcggtcctac
     301  aagctagacc cccgcaacgt ccgcaccttc ccgcacatat ccgacctcgc
     351  aagaggcttt aacaagtaca aattcactga tgtgaaggtt aggtacagct
     401  cgaaggtgca ggactctgag tgtgggctca cgatcgcttt ctccgctgat
     451  tccagcgacc cagcacctcg cggcaagttt gacttgtacg ccctggggag
     501  caaggtggag ggcgcggccc acaaaaatct cctttacact gtcccggttg
     551  acaaaggaca gcgcttcctg cgtgacggtg agggagacaa cgccaaggag
     601  gtggatgctg gcgtaattta tgtgctgatg gatggggcac acgacacccg
     651  cgcgggggag ttattcctcg aggtgactgt tgtgctgtcc cagccaacat
     701  acaaccagcg atccacgcaa tacatcagcg gcacagagca ccgcggcgga
     751  cccaactacg ttaacatcac caagagtgcg aacactatga cgcttacgtt
     801  ccaggcggct gggacgtttc tgctttgtag ctattcctct ccactggaga
     851  aagttgggcg cctatccttg gcggatgcgg accaatcaca ggtcgactct
     901  gcgaataata gcagtaatat aatagaggct gtagtaacca cccctggtgg
     951  tagtattgta tattacttca agtcccggga acagatgtca ttccgggctt
    1001  acgttggacg catgtga