Sequence of DPV Rice black streaked dwarf virus
Rice black streaked dwarf virus segment 9, complete sequence.
ACC No: AY039705
Dated: 2003-04-17 | Length: 1900 | CRC: 495889784
!!NA_SEQUENCE 1.0
ID AY039705 standard; RNA; VRL; 1900 BP.
XX
AC AY039705;
XX
SV AY039705.1
XX
DT 31-JUL-2001 (Rel. 68, Created)
DT 17-APR-2003 (Rel. 75, Last updated, Version 2)
XX
DE Rice black streaked dwarf virus segment 9, complete sequence.
XX
KW .
XX
OS Rice black streaked dwarf virus
OC Viruses; dsRNA viruses; Reoviridae; Fijivirus; Fijivirus group 2.
XX
RN [1]
RP 1-1900
RX MEDLINE; 22303333.
RX PUBMED; 12416683.
RA Bai F.W., Yan J., Qu Z.C., Zhang H.W., Xu J., Ye M.M., Shen D.L.;
RT "Phylogenetic analysis reveals that a dwarfing disease on different cereal
RT crops in China is due to rice black streaked dwarf virus (RBSDV)";
RL Virus Genes 25(2):201-206(2002).
XX
RN [2]
RP 1-1900
RA Bai F., Qu Z., Xu J., Ye M., Shen D.;
RT ;
RL Submitted (13-JUN-2001) to the EMBL/GenBank/DDBJ databases.
RL The Institute of Genetics, Fudan University, 220 Handan Road, Shanghai
RL 200433, P.R. China
XX
DR SPTREMBL; Q910K4; Q910K4.
DR SPTREMBL; Q91H02; Q91H02.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1900
FT /db_xref="taxon:10990"
FT /mol_type="genomic RNA"
FT /organism="Rice black streaked dwarf virus"
FT /isolate="Shandong"
FT /segment="9"
FT CDS 52. .1095
FT /codon_start=1
FT /db_xref="SPTREMBL:Q91H02"
FT /note="ORF1"
FT /product="unknown"
FT /protein_id="AAK73172.1"
FT /translation="MADQERRTFGSYKIEELTIKNDQPNRNTNSSTSQSTENRLSTKKI
FT PLLDDGIFELLNYLIDGTNFDKTCYCGFNYSHLPNLERDFNVASIYVRENFELCTENLD
FT LKDYDRQANISVKSPDFTLLLEYTLKPSSETDPTIPENEKEENAEPVTPKVVAPKEEKK
FT TVEMSLLPILNRESEESLSSEILEGEAAVVNVFKMYIKGFLMYLGENPNSYDRQLNIEK
FT YRPLLISIIGYEHLIGTRVPNKEVNHIFYQLATFDNYPFDLLRFQLSSLISTPALIREK
FT IAKEGLFKIITSNTLRGASRQTVLFRGINGSESFLNIKRYRKFRTRIVGNVDCVIKSDF
FT SSLKLDV"
FT CDS 1160. .1789
FT /codon_start=1
FT /db_xref="SPTREMBL:Q910K4"
FT /note="ORF2"
FT /product="unknown"
FT /protein_id="AAK73173.1"
FT /translation="MNPQSSVNVDTYTFNCPFELAKIQIESMKPIMQDFSNFDDIFNRT
FT LSDSEIDDRVEQLEVDVESKVDPIVRRRYGKIGHIIIMIISFVFFGIFKLTLKMFYHLF
FT RCVCCNPLIRGILSIIFTILFYFLLCVCIYFVYYFFGDQISLAYNTLNQIDSSNFINST
FT QVEEKVKNIIHDGSLFFGTRDQATGQINEIETQVVNGGTVNYTLFN"
XX
SQ Sequence 1900 BP; 607 A; 324 C; 314 G; 655 T; 0 other;
AY039705 Length: 1900 April 23, 2003 11:42 Type: N Check: 1049 ..
1 aagtttttaa gcctggaact gacacattcc tacaggaacg agcgtaagag
51 aatggcagac caagagcgga gaacgtttgg atcatataaa atagaagaat
101 tgacaattaa aaacgaccaa ccaaatagaa acacaaattc atcgacttct
151 caatctactg aaaatcgtct ttcaaccaag aaaatccccc tactcgatga
201 cggcatcttc gaacttttga actaccttat tgatggaacc aacttcgaca
251 aaacttgcta ttgtggtttt aattattctc atctccctaa ccttgaacgt
301 gactttaacg ttgcatctat ttatgtccgc gagaattttg aattatgcac
351 tgaaaactta gatttgaaag attatgatag acaggcaaat ataagcgtga
401 aatctcctga ttttactttg cttctagaat atactcttaa accatcatcg
451 gaaaccgatc ctactattcc agagaatgag aaagaagaga atgctgaacc
501 agttactcct aaagttgtcg ctccaaaaga agagaagaaa acagttgaaa
551 tgtcgttgtt gccaattctg aaccgtgaat ctgaagaatc tttaagctct
601 gaaattcttg aaggtgaagc tgctgttgtt aatgtattca aaatgtatat
651 aaaaggcttt ttaatgtatt tgggtgaaaa tccaaactct tatgaccgtc
701 aattaaacat agaaaagtat cgtcctttgc taatttcaat catcggatat
751 gaacatctca tcggaacaag agttccaaat aaagaagtta atcacatttt
801 ttaccagttg gcgacttttg ataactaccc ttttgaccta ctgagattcc
851 agctttcttc actcatctct acacccgctt taatccgaga aaaaattgct
901 aaagaaggat tgtttaaaat tattacgtca aacaccctgc gtggtgcttc
951 ccgtcaaact gtcttattta gaggaattaa tggaagtgaa tcgtttttga
1001 acatcaagag atatcgtaaa ttcaggacac gaattgttgg caatgttgat
1051 tgcgttatta aatctgattt ttcttccttg aaattggacg tttgatcttt
1101 tactttttat gttctgaaaa ttgaatatca ctggttaatg aatcatttcc
1151 tttaatttta tgaatcccca atcttcagta aatgttgata cttatacttt
1201 taactgtccc tttgaactag caaaaattca aattgaatcg atgaaaccta
1251 ttatgcaaga ttttagcaat tttgatgata tctttaatcg tacgttatct
1301 gattctgaaa ttgatgatcg cgtagaacag cttgaagttg acgtcgaatc
1351 aaaagtcgat ccaattgtga gaagaagata tggtaaaatt ggacatatca
1401 tcattatgat tatcagtttt gtattttttg gcatttttaa gcttactctt
1451 aagatgtttt atcatttgtt tcgttgtgtg tgttgtaatc ctttgattag
1501 aggtatactt agtatcattt ttaccatatt attttacttt ctactgtgtg
1551 tgtgcattta ttttgtttat tacttttttg gagatcaaat ttcattagcg
1601 tacaatactt tgaatcaaat tgatagttct aattttataa attctactca
1651 agttgaagaa aaagttaaaa atataattca cgacggttca ctttttttcg
1701 gtactcgtga tcaagcaaca ggtcaaatta acgaaattga aactcaagtt
1751 gtaaatggtg gtactgtaaa ctatacgctt tttaattaac gtctattttg
1801 tatgactctg aaaatattca cgctcgcaag tcgattctct tacagttatg
1851 tcttttgagg tatgacaaac tcgttctcaa gccggcttac agctatcgtc