Sequence of DPV Infectious salmon anemia virus
Infectious salmon anemia virus segment 7, complete sequence.
ACC No: AY044132
Dated: 2003-05-29 | Length: 1125 | CRC: 1512790947
!!NA_SEQUENCE 1.0
ID AY044132 standard; genomic RNA; VRL; 1125 BP.
XX
AC AY044132;
XX
SV AY044132.1
XX
DT 25-JUN-2002 (Rel. 72, Created)
DT 29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE Infectious salmon anemia virus segment 7, complete sequence.
XX
KW .
XX
OS Infectious salmon anemia virus
OC Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
OC unclassified Orthomyxoviridae.
XX
RN [1]
RP 1-1125
RX MEDLINE; 22073276.
RX PUBMED; 12078979.
RA Bierin E., Falk K., Hoel E., Thevarajan J., Joerink M., Nylund A.,
RA Endresen C., Krossoyl B.;
RT "Segment 8 encodes a structural protein of infectious salmon anaemia virus
RT (ISAV); the co-linear transcript from Segment 7 probably encodes a
RT non-structural or minor structural protein";
RL Dis. Aquat. Org. 49(2):117-122(2002).
XX
RN [2]
RP 1-1125
RA Biering E., Hoel E., Jegatheswaran T., Falk K., Nylund A., Endresen C.,
RA Krossoy B.;
RT "The putative genomic segment 7 of infectious salmon anaemia virus (ISAV)
RT encodes one spliced and one unspliced mRNA";
RL Unpublished.
XX
RN [3]
RP 1-1125
RA Biering E., Hoel E., Jegatheswaran T., Falk K., Nylund A., Endresen C.,
RA Krossoy B.;
RT ;
RL Submitted (06-JUL-2001) to the EMBL/GenBank/DDBJ databases.
RL R&D, Intervet Norbio, Thormohlensgate 55, Bergen 5008, Norway
XX
FH Key Location/Qualifiers
FH
FT source 1. .1125
FT /db_xref="taxon:55987"
FT /mol_type="genomic RNA"
FT /note="cRNA sequence"
FT /organism="Infectious salmon anemia virus"
FT /isolate="Bremnes 98"
FT /segment="7"
FT CDS join(22. .84,611. .1027)
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:Q8JNI3"
FT /note="ORF 2"
FT /product="unknown"
FT /protein_id="AAK93943.1"
FT /translation="MDFTKVYGVLVDQLKLHGKDKVASFLSGSKVPGEDGISSTSGMLD
FT LLKDQVGSLSINDSMTEPKTELDPGLYPWLKWTETAYHSSTRSLASTIVMGALGQHRGS
FT GDGITMRELELSLGLDFTSECDWLKTCFVNKNFVFLSEQEIAVNMEVEKYICNEN"
FT CDS 22. .924
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:Q8JNI2"
FT /note="ORF 1"
FT /product="unknown"
FT /protein_id="AAK93942.1"
FT /translation="MDFTKVYGVLVDQLKLHGKDKVLNRFLWGLSLKHVIKYKENVQNM
FT SGVNFEVMVPEQGGKVVFSLTEMGSCVSCYGDDEPDEGSCELASENMDFPSCPLGNGDD
FT FCLSLALSTMRWSGMTRRNNFMDRFIGSFVHCTPVMIWLYEKMARRNHHKMVCHTCPDE
FT HKFSEKEELQGYYEECLEASTDIFLDELATVVTGGFFPVGLKGSWGGWYLKYVRYAGPL
FT EGSSGFIVNQRFYDRAQNRAGSRVVSMVEMDRDGVSFIYEKPSIYHSDGCTGTASRVWR
FT RDHNERAGVELRAGLHFRM"
XX
SQ Sequence 1125 BP; 341 A; 189 C; 286 G; 309 T; 0 other;
AY044132 Length: 1125 October 13, 2004 17:42 Type: N Check: 3832 ..
1 agctaagatt ctccttctac aatggatttc accaaagtgt atggtgtgct
51 ggttgaccaa ctaaaacttc acggaaaaga caaggtacta aatagattcc
101 tttggggtct gtccttgaag catgtgatta aatataaaga aaatgttcaa
151 aacatgtccg gagtgaactt cgaggtaatg gttcctgaac aaggtggaaa
201 agtggttttc agtcttactg agatgggatc atgtgtttcc tgctacgggg
251 acgacgaacc tgacgagggg tcatgtgaac ttgcatctga gaacatggat
301 tttccaagct gccctctcgg gaatggagat gacttctgtt tgtcactggc
351 cctgagcaca atgagatggt caggaatgac taggagaaac aacttcatgg
401 acagattcat tggaagcttt gttcactgta caccagtcat gatttggttg
451 tacgagaaaa tggctaggag aaatcaccac aagatggtct gtcacacatg
501 ccctgatgaa cacaagttca gcgaaaagga agagttgcag gggtactatg
551 aggagtgtct ggaagcctct actgacattt tccttgatga acttgctact
601 gttgttacag gtggcttctt tcctgtcggg ctcaaaggtt cctggggagg
651 atggtatctc aagtacgtca ggtatgctgg acctcttgaa ggatcaagtg
701 ggttcattgt caatcaacga ttctatgaca gagcccaaaa cagagctgga
751 tccagggttg tatccatggt tgaaatggac agagacggcg tatcattcat
801 ctacgagaag cctagcatct accatagtga tgggtgcact gggacagcat
851 cgagggtctg gagacgggat cacaatgaga gagctggagt tgagcttagg
901 gctggacttc acttcagaat gtgattggct gaaaacatgt tttgtaaaca
951 agaattttgt gtttttgtct gagcaagaaa ttgctgtaaa catggaagtt
1001 gaaaaataca tttgtaatga gaattaaagt taactttgtg atctaaaaag
1051 taactagtga caaaatatgt attatgttgt acatggtgtt gatgataatt
1101 tttaaaacga aaaaaaaaaa aaaaa