Sequence of DPV Marine birnavirus
Marine birnavirus - AY-98 VP1 (vp1) gene, complete cds.
ACC No: AY123970
Dated: 2005-03-25 | Length: 2778 | CRC: -417761150
ID AY123970; SV 1; linear; genomic RNA; STD; VRL; 2778 BP.
XX
AC AY123970;
XX
DT 24-JUL-2003 (Rel. 76, Created)
DT 25-MAR-2005 (Rel. 83, Last updated, Version 2)
XX
DE Marine birnavirus - AY-98 VP1 (vp1) gene, complete cds.
XX
KW .
XX
OS Marine birnavirus - AY-98
OC Viruses; dsRNA viruses; Birnaviridae; Aquabirnavirus;
OC unclassified Aquabirnavirus.
XX
RN [1]
RP 1-2778
RA Zhang C.X., Suzuki S.;
RT "Genome segment B encoding the RNA-dependent RNA polymerase protein VP1 of
RT the marine birnavirus isolated from ayu, Plecoglossus altivelis";
RL Unpublished.
XX
RN [2]
RP 1-2778
RA Zhang C.X., Suzuki S.;
RT ;
RL Submitted (19-JUN-2002) to the EMBL/GenBank/DDBJ databases.
RL Center for Marine Environmental Studies, Ehime University, Matsuyama, Ehime
RL 790-8577, Japan
XX
FH Key Location/Qualifiers
FH
FT source 1. .2778
FT /organism="Marine birnavirus - AY-98"
FT /segment="B"
FT /specific_host="Plecoglossus altivelis"
FT /isolate="AY-98"
FT /mol_type="genomic RNA"
FT /country="Japan"
FT /note="isolated in 1998"
FT /db_xref="taxon:320045"
FT gene 101. .2635
FT /gene="vp1"
FT CDS 101. .2635
FT /codon_start=1
FT /gene="vp1"
FT /product="VP1"
FT /note="viral protein 1"
FT /db_xref="GOA:Q7T8V1"
FT /db_xref="InterPro:IPR007100"
FT /db_xref="UniProtKB/TrEMBL:Q7T8V1"
FT /protein_id="AAM89503.1"
FT /translation="MSDIFNSPQNKASILSALMKSTAGDVEDVLIPKRFRPAKDPLDSP
FT QAAAQFLKDNKYRILRPRAIPTMVELETDAALPRLRQMVDDGKLKDTVSVPEGTTAFYP
FT KYYPFHKPDHDEVGTFGAPDITLLKQLTFFLLENDFPTGPETLRQVREAIATLQYGSGS
FT YSGQLNRLLAMKGVATGRNPNKTPKTVGYSNEQLAKLLEQTLPINPPKNEDPDLRWAPS
FT WLINYTGDQSTDKSHLPHVTVKSSAGLPYIGKTKGDTTAEALVLADSFIRDLGKAATSA
FT DPETEVKKTITDFWYLSCGLLFPKGERYTQVDWDKKTRNIWSAPYPTHLLLSMVSSPVM
FT EESKLNITNTQTPSLYGFSPFHGGMDRIMTIIRDSLDTGEDLVMIYADNIYILQDNTWY
FT SIDLEKGEANCTPQHMQAMMYYLLTRGWTNEDGSPRYNPTWATFAMNVAPSMVVDSSCL
FT LMNLQLKTYGQGSGNAFTFLNNHLMSTIVVAEWVKAGKPNPMTKEFMDLEEKTGINYKI
FT ERELKNLREVIMEAVETAPQDGYLADGSDLPPHKPGRAVELDLLGWSAVYSRQMEMFVP
FT VLENERLIASAAYPKGLENKTLARKPGAEIAYQIVRYEAIRLVGGWNNPLLETATKHMS
FT LDKRKRLEVKGIDVTGFLDDWNNMSELGGDLEGITLAEPLTNQTLIDINTPLESFDPKE
FT RPETPRSPKKTLDEVTAAITSGTYKDPKSAVWRLLDQRTKLRVSTLRDQAAALKPASST
FT VENWAEATEELATQQQLLMKANTLLKSSLTETREALETVQSDKIIAGKSNPEKNPGNAA
FT NPVVGYGEFSEKIPLTPTQKKNAKRREKQRRN"
XX
SQ Sequence 2778 BP; 859 A; 799 C; 670 G; 450 T; 0 other;
ay123970 Length: 2778 25-MAR-2005 Type: N Check: 1503 ..
1 ggaaacagtg ggtcaacgtt ggtggcaccc gacataccac gactgtttac
51 gtatgcacgc aagtgcccct tttaaaacct ctacatttac aactcatgat
101 atgtcggaca tcttcaactc acctcagaac aaggcgtcaa tcttgagtgc
151 tctcatgaaa agcacagcag gagatgtgga agacgtgcta attccaaagc
201 gcttccgacc agccaaggat ccccttgaca gtccacaagc tgcagcacag
251 ttcctaaagg acaacaagta ccgcatactt aggccgcgag ccattccaac
301 catggtcgaa ctagagacag atgccgcgct gcctcgactg cgacagatgg
351 tcgacgatgg caagcttaag gacacggtaa gcgtcccaga aggaaccacc
401 gcattctatc caaaatacta cccattccac aagccagatc atgacgaagt
451 tggaacgttt ggggctccag acatcacact tctgaaacaa ctcacattct
501 tcctactgga aaatgacttt ccaacaggcc cagagacttt acggcaagtc
551 agagaagcca tagccacgct tcagtatggc tcaggcagct actcaggaca
601 gctaaacaga ctcctggcga tgaaaggggt tgcaactgga aggaatccaa
651 acaaaactcc caagacagtg ggctacagca atgagcagct ggccaaactc
701 cttgagcaga cactaccgat caaccctcca aagaacgagg acccagacct
751 ccggtgggcc cccagctggt tgatcaacta caccggagac cagagcaccg
801 acaagtcaca tctgccacac gtgactgtca agtcctcagc cggcctacca
851 tacataggca aaaccaaagg agacacgact gcagaagcgc tcgttctggc
901 tgactccttc ataagagacc tcggaaaagc cgcaacatca gctgatccag
951 agacagaagt aaagaagacc ataactgact tctggtacct gagctgtggg
1001 ctgctattcc caaagggcga gagatacacc caggtggact gggataagaa
1051 gacccggaac atatggagcg cgccctaccc aacacaccta ttgctatcaa
1101 tggtgtcatc accggtgatg gaagagtcca agctcaacat caccaacacc
1151 cagactccgt ccctgtacgg gttctctcca ttccatggcg ggatggacag
1201 aataatgacg atcataagag acagtctgga cacaggagag gacctggtga
1251 tgatctacgc agacaacatc tacatactgc aagacaacac ctggtactca
1301 atcgacctag agaaaggtga ggccaactgc acaccacaac acatgcaggc
1351 catgatgtac tacctgctaa cgcgaggatg gacaaatgag gatggctcac
1401 cccgctacaa cccaacatgg gcgaccttcg ccatgaacgt tgcaccgtca
1451 atggttgtgg actcatcatg cctattgatg aacctgcaac tcaagacata
1501 cgggcaaggc agcggaaacg ccttcacctt tctcaacaac cacctaatgt
1551 caacaatcgt agttgccgag tgggtaaagg ccggaaaacc caaccccatg
1601 acaaaagagt tcatggacct cgaagagaag actgggataa actacaagat
1651 tgagcgggaa ctcaagaatc tacgggaagt catcatggag gccgtcgaaa
1701 cagcacccca ggacggctac ctggccgacg gctcagacct cccgccacac
1751 aaacccggga gagccgtgga gctagaccta ctcggctggt ccgcggtata
1801 cagccgtcag atggagatgt ttgtgccagt cctcgagaac gagcgactaa
1851 ttgcatcagc tgcctaccca aagggtctcg agaacaagac cctagccaga
1901 aaacccgggg ccgagatcgc ataccagata gtcaggtacg aagcaatccg
1951 cctggtaggt ggctggaaca atcccctgct agaaaccgcc acaaaacaca
2001 tgtccctaga caagagaaag cgtctagagg taaagggcat tgacgtcacg
2051 gggttcctgg atgactggaa caacatgtca gaactcgggg gtgacctcga
2101 agggataacc ctagctgaac ccctgacaaa ccaaaccctg atagacatca
2151 acacacccct tgagagcttc gacccaaaag agaggcccga aacacctcgg
2201 tcacccaaga agactctgga tgaagtaacc gccgccataa cctccgggac
2251 ttacaaggac cccaagagtg ccgtgtggag gctgctcgac cagaggacca
2301 agctaagagt cagcacgcta agagaccagg cggctgccct caaaccagca
2351 tcatccacag tggaaaactg ggccgaagca acggaggaac tagcaacaca
2401 acaacagctt ctcatgaaag ccaacacgct gctcaagagc agtctcacag
2451 agaccagaga agcgctggag accgtccagt cagacaaaat catcgctgga
2501 aaatcgaacc ccgagaagaa ccccggcaac gcagccaacc ccgtggttgg
2551 ctacggcgaa ttcagcgaaa agattcctct aactcccacg cagaagaaga
2601 acgccaagcg aagggagaaa cagaggcgca actaataaga agacaaccgg
2651 gaagtatccg aaatgaccta gctggactca tatgtaagct ccgcgccgca
2701 cggcaagcta aacaaaagta gtgaccctga gagtgccacc aacatgaccc
2751 tagacaacat ccggttccgc cagggacc