Sequence of DPV Yellowtail ascites virus
Marine birnavirus strain YT-01A putative RNA-dependent RNA polymerase (vp1) mRNA, complete cds.
ACC No: AY129663
Dated: 2002-09-10 | Length: 2735 | CRC: -47449767
!!NA_SEQUENCE 1.0
ID AY129663 standard; RNA; VRL; 2735 BP.
XX
AC AY129663;
XX
SV AY129663.1
XX
DT 10-SEP-2002 (Rel. 73, Created)
DT 10-SEP-2002 (Rel. 73, Last updated, Version 1)
XX
DE Marine birnavirus strain YT-01A putative RNA-dependent RNA polymerase (vp1)
DE mRNA, complete cds.
XX
KW .
XX
OS Marine birnavirus
OC Viruses; dsRNA viruses; Birnaviridae.
XX
RN [1]
RP 1-2735
RA Zhang C.X., Suzuki S.;
RT "Comparison of the RNA polymerase gene between Marine Birnavirus and other
RT Birnaviruses";
RL Unpublished.
XX
RN [2]
RP 1-2735
RA Zhang C.X., Suzuki S.;
RT ;
RL Submitted (09-JUL-2002) to the EMBL/GenBank/DDBJ databases.
RL Center for Marine Environmental Studies, Ehime University, Matsuyama, Ehime
RL 790-8577, Japan
XX
FH Key Location/Qualifiers
FH
FT source 1. .2735
FT /db_xref="taxon:79600"
FT /organism="Marine birnavirus"
FT /strain="YT-01A"
FT /isolation_source="isolated from yellowtail in Nagasaki,
FT Japan"
FT CDS 79. .2616
FT /codon_start=1
FT /note="viral protein 1"
FT /gene="vp1"
FT /product="putative RNA-dependent RNA polymerase"
FT /protein_id="AAN04571.1"
FT /translation="MSDIFNSPQNKASILSALMKSTAGDVEDVLIPKRFRPAKDPLDSP
FT QAAAQFLKDNKYRILRPRAIPTMVELETDAALPRLRQMVDDGKLKDTVSVPEGTTAFYP
FT KYYPFHKPDHDEVGTFGAPDITLLKQLTFFLLENDFPTGPETLRQVREAIATLQYGSGS
FT YSGQLNRLLAMKGVATGRNPNKTPKTVGYSNEQLAKLLEQTLPINPPKNEDPDLRWAPS
FT WLINYTGDQSTDKSYLPHVTVKSSAGLPYIGKTKGDTTAEALVLADSFIRDLGKAATSA
FT DPETEVKKTITDFWYLSCGLLFPKGERYTQVDWDKKTRNIWSAPYPTHLLLSMVSSPVM
FT EESKLNITNTQTPSLYGFSPFHGGMDRIMTIIRDSLDTGEDLVMIYADNIYILQDNTWY
FT SIDLEKGEANCTPQHMQAMMYYLLTRGWTNEDGSPRYNPTWATFAMNVAPSMVVDSSCL
FT MMNLQLKTYGQGSGNAFTFLNNHLMSTIVVAEWVKAGKPNPMTKEFMDLEERTGINFKI
FT ERELKNLREVIMEAVETAPQDGYLADGSDLPPHKPGRAVELDLLGWSAVYSRQMEMFVP
FT VLENERLIASAAYPKGLENKTLARKPGAEIAYQIVRYEAIRLVGGWNNPLLETAAKHMS
FT LDKRKRLEVKGIDVTGFLDDWNNMSEFGGDLEGITLAEPLTNQTLIDINTPLESFDPKE
FT RPETPRSPKKTLDEVTAAITSGTYKDPKSAVWRLLDQRTKLRVSTLRDQAAALKPASST
FT VDNWAEATEELAAQQQLLMKANTLLKSSLTETREALETVQSDKIIAGKSNPEKNPGNAA
FT NPVVGYGEFSEKIPLTPTQKKNAKRREKQRRNQ"
XX
SQ Sequence 2735 BP; 844 A; 781 C; 661 G; 449 T; 0 other;
AY129663 Length: 2735 December 18, 2002 17:04 Type: N Check: 3699 ..
1 tggcacccga cataccacga ctgtttaggt atgcacgcaa gtgccccttt
51 caaaacctct acatttacaa ctcatgatat gtcggacatc ttcaactcac
101 ctcagaacaa ggcgtcaatc ttgagtgctc tcatgaaaag cacagcagga
151 gatgtggaag acgtgctaat tccaaagcgc ttccgaccag ccaaggatcc
201 ccttgacagt ccacaagctg cagcacagtt cctaaaggac aacaagtacc
251 gcatacttag gccgcgagcc attccaacca tggtcgaact agagacagat
301 gccgctctgc ctcgactgcg acagatggtc gacgatggca agcttaagga
351 cacggtaagc gtcccagaag gaaccaccgc attctatcca aaatactacc
401 cattccacaa gccagatcat gatgaagttg gaacgtttgg ggctccagac
451 atcacacttc tgaaacaact cacattcttc ctactggaaa atgactttcc
501 aacaggccca gagactttac ggcaagtcag agaagccata gccacgcttc
551 agtatggctc aggcagctac tcaggacagc taaacagact cctggcgatg
601 aaaggggttg caactggaag gaatccgaac aaaactccca agacagtggg
651 ctacagcaat gagcagctgg ccaaactcct tgagcagaca ctaccgatca
701 accctccaaa gaacgaggac ccagacctcc ggtgggcccc cagctggttg
751 atcaactaca ccggagacca gagcaccgac aagtcatatc tgccacatgt
801 gactgtcaag tcctcagccg gcctaccata cataggcaaa accaaaggag
851 acacgactgc agaagcgctc gttctggctg actccttcat aagagacctc
901 ggaaaagccg caacatcagc tgatccagag acagaagtaa agaagaccat
951 aactgacttc tggtacctga gctgtgggct gctattccca aagggcgaga
1001 gatacaccca ggtggactgg gataagaaga cccggaacat atggagcgcg
1051 ccctacccaa cacacctatt gctatcaatg gtgtcatcac cggtgatgga
1101 agagtccaag ctcaacatca ccaacaccca gactccgtcc ctgtacgggt
1151 tctctccatt ccatggcggg atggacagaa taatgacgat cataagagac
1201 agtctggaca caggagagga cctggtgatg atctacgcag acaacatcta
1251 catactgcaa gacaacacct ggtactcaat cgacctagag aaaggtgagg
1301 ccaactgcac accacaacac atgcaggcca tgatgtacta cctgctaaca
1351 cgaggatgga caaatgagga tggctcaccc cgctacaacc caacatgggc
1401 gaccttcgcc atgaacgttg caccgtcaat ggttgtggac tcatcatgcc
1451 taatgatgaa cctgcaactc aagacatacg ggcaaggcag cggaaatgcc
1501 ttcacctttc tcaacaacca cctaatgtca acaatcgtag ttgccgagtg
1551 ggtaaaggcc ggaaaaccca accccatgac gaaagagttc atggacctcg
1601 aagagaggac tggaataaac ttcaagatcg agcgggaact caagaatcta
1651 cgggaagtca tcatggaggc cgtcgaaaca gcgccccagg acggctacct
1701 ggccgacggc tcagacctcc cgccacacaa acccgggaga gccgtggagc
1751 tagacctact cggctggtcc gcggtataca gccgacagat ggagatgttt
1801 gtgccagtcc tcgagaacga gcgactaatt gcatcagctg cctacccaaa
1851 gggtcttgag aacaagaccc tagccagaaa acccggggcc gagatcgcat
1901 accagatagt caggtatgaa gcgatccgcc tggtaggtgg ctggaacaat
1951 cccctgctag aaaccgccgc aaaacacatg tccctagaca agaggaagcg
2001 tctagaagta aagggcattg acgtcacggg gttcctggat gactggaaca
2051 acatgtcaga attcgggggt gacctcgaag ggataaccct agctgaaccc
2101 ctgacaaacc aaaccctgat agacatcaac acaccccttg agagctttga
2151 cccaaaagag aggcccgaaa cgcctcggtc acccaagaag actctggatg
2201 aggtaaccgc cgccataacc tccgggacct acaaggaccc caagagtgcc
2251 gtgtggaggc tgctcgacca gaggaccaag ctaagagtca gcacgctaag
2301 agaccaggca gctgccctca aaccagcatc atccacagta gataactggg
2351 ccgaagcaac ggaggaacta gcagcacaac aacagcttct catgaaagcc
2401 aacacgctgc tcaagagcag tctcacagag accagagaag cgctggagac
2451 cgtccagtca gacaaaatca tcgctggaaa atcgaacccc gagaagaacc
2501 ccggcaacgc ggccaacccc gtggttggct acggcgaatt cagcgaaaag
2551 attcctctaa ctcccacgca gaagaagaac gccaagcgaa gggagaaaca
2601 gaggcgcaac caataagaag acaaccggga agtatccgaa atgacctagc
2651 tggactcata tgtaagctcc gcgccgcacg gcaagctaaa caaaagtagt
2701 gaccctgaga gtgccaccaa catgacccta gataa