Sequence of DPV Cowpea aphid-borne mosaic virus

Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, partial cds.

ACC No: AY253908

Dated: 2006-08-15 | Length: 831 | CRC: -412231157

                
ID   AY253908; SV 1; linear; mRNA; STD; VRL; 831 BP.
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AC   AY253908;
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DT   22-APR-2003 (Rel. 75, Created)
DT   15-AUG-2006 (Rel. 88, Last updated, Version 2)
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DE   Cowpea aphid-borne mosaic virus isolate PE3 polyprotein mRNA, partial cds.
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KW   .
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OS   Cowpea aphid-borne mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-831
RX   PUBMED; 16596328.
RA   Nascimento A.V., Santana E.N., Braz A.S., Alfenas P.F., Pio-Ribeiro G.,
RA   Andrade G.P., de Carvalho M.G., Zerbini F.M.;
RT   "Cowpea aphid-borne mosaic virus (CABMV) is widespread in passionfruit in
RT   Brazil and causes passionfruit woodiness disease";
RL   Arch. Virol. 151(9):1797-1809(2006).
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RN   [2]
RP   1-831
RA   Nascimento A.V.S., Souza A.R.R., Alfenas P.F., Andrade G.P.,
RA   Pio-Ribeiro G., Zerbini F.M.;
RT   ;
RL   Submitted (10-MAR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n,
RL   Vicosa, Minas Gerais 36571-000, Brazil
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FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Cowpea aphid-borne mosaic virus"
FT                   /isolate="PE3"
FT                   /mol_type="mRNA"
FT                   /note="CABMV"
FT                   /db_xref="taxon:12199"
FT   CDS             <1. .831
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q80H71"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q80H71"
FT                   /protein_id="AAP04518.1"
FT                   /translation="QSGEKDKELDAGKEKDKIKEAKEQSMQQKQARNKGAKETERDVST
FT                   SSSGQLVPRLQKISKKMNMPMIAGRVLLDLDHLIEYKPAQIDLYNTRASKTQLSKWFEA
FT                   IKGEYELDDDKMGVIMNGFMVWCIENGTSPDVNGVWTMMDGDEQVEFPLQPILGNANPT
FT                   LRQIMLHFSDAAEAYIEMRNFEGFYMPRYGLLRNLRDKSLARYAFDFYEVRFKISDRAR
FT                   EAIAQMKVAAFANVNTRMFGLDGNVATTSENNERHTATDVNQNMHSLLGMTHGQ"
FT   mat_peptide     1. .828
FT                   /product="coat protein"
FT                   /note="CP"
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SQ   Sequence 831 BP; 280 A; 154 C; 215 G; 182 T; 0 other;

ay253908 Length: 831  15-AUG-2006  Type: N  Check: 5664  ..

       1  caatctggcg aaaaggacaa agaattggat gcaggcaagg aaaaagataa
      51  gatcaaagag gccaaagagc agtcaatgca acaaaagcaa gcaaggaaca
     101  aaggggcgaa ggaaacagag agagacgttt caactagttc ttcaggacaa
     151  ctagttccac gtctacaaaa gattagcaaa aagatgaata tgcccatgat
     201  cgctggtaga gtgcttctcg atttggacca tttgatagaa tacaaaccag
     251  cacaaattga tctatacaac accagagctt caaagacaca actcagcaaa
     301  tggtttgagg ccatcaaagg agaatacgag ttggacgatg acaagatggg
     351  tgttatcatg aatgggttca tggtttggtg cattgaaaat ggaacctcac
     401  ctgatgtgaa tggggtgtgg accatgatgg atggggatga acaagtggaa
     451  tttccgctcc aaccaatctt ggggaatgca aaccccacac tcaggcaaat
     501  tatgctccac ttttcagacg cagctgaagc gtacattgag atgagaaatt
     551  ttgaagggtt ttacatgccc aggtatggac ttctgaggaa tttgagagac
     601  aagagcttag caaggtatgc tttcgatttt tatgaagtca ggtttaagat
     651  ttccgacaga gcaagggaag caatagccca gatgaaggtt gcagctttcg
     701  ccaacgttaa caccaggatg tttggcctgg atgggaatgt ggcaacaact
     751  agtgagaaca atgagaggca cactgccact gatgttaatc agaacatgca
     801  ctccctcttg gggatgacgc atgggcagta a