Sequence of DPV Cowpea aphid-borne mosaic virus

Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, partial cds.

ACC No: AY253910

Dated: 2006-08-15 | Length: 832 | CRC: -1854717370

                
ID   AY253910; SV 1; linear; mRNA; STD; VRL; 832 BP.
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AC   AY253910;
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DT   22-APR-2003 (Rel. 75, Created)
DT   15-AUG-2006 (Rel. 88, Last updated, Version 2)
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DE   Cowpea aphid-borne mosaic virus isolate PB2 polyprotein mRNA, partial cds.
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KW   .
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OS   Cowpea aphid-borne mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-832
RX   PUBMED; 16596328.
RA   Nascimento A.V., Santana E.N., Braz A.S., Alfenas P.F., Pio-Ribeiro G.,
RA   Andrade G.P., de Carvalho M.G., Zerbini F.M.;
RT   "Cowpea aphid-borne mosaic virus (CABMV) is widespread in passionfruit in
RT   Brazil and causes passionfruit woodiness disease";
RL   Arch. Virol. 151(9):1797-1809(2006).
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RN   [2]
RP   1-832
RA   Nascimento A.V.S., Souza A.R.R., Alfenas P.F., Andrade G.P.,
RA   Pio-Ribeiro G., Zerbini F.M.;
RT   ;
RL   Submitted (10-MAR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n,
RL   Vicosa, Minas Gerais 36571-000, Brazil
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FH   Key             Location/Qualifiers
FH
FT   source          1. .832
FT                   /organism="Cowpea aphid-borne mosaic virus"
FT                   /isolate="PB2"
FT                   /mol_type="mRNA"
FT                   /note="CABMV"
FT                   /db_xref="taxon:12199"
FT   CDS             <1. .831
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q80H69"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q80H69"
FT                   /protein_id="AAP04520.1"
FT                   /translation="QSDGKDKELDAGKEKDKIKDAKEQLVQQKQATSTGFKETERDVST
FT                   SSSGQLVPRLQKISKKMNMPIIAGRVILNLDHLIEYKPAQIDLYNTRASRTQLSKWFEA
FT                   IKGEYELDDDKMGVIMNGFMVWCIENGTSPDVNGVWTMMDGDEQVEFPLKPIVENAKPT
FT                   LRQIMHHFSDAAEAYIEMRNSEGFNMPRYGLLRNLRDKSLARYAFDFYEVTSKTSDRAR
FT                   EAIAQMKAAALANVNTRMFGLDGNVATTSENTERHTATDVNQNMHSLLGMTHGQ"
FT   mat_peptide     1. .828
FT                   /product="coat protein"
FT                   /note="CP"
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SQ   Sequence 832 BP; 289 A; 158 C; 207 G; 178 T; 0 other;

ay253910 Length: 832  15-AUG-2006  Type: N  Check: 2920  ..

       1  cagtctgatg gaaaggacaa agaattggac gcaggcaagg aaaaagataa
      51  gatcaaagac gccaaagagc agttagtgca acaaaagcaa gcaacgagca
     101  caggattcaa agaaacagag agagacgttt caactagttc ttcaggacaa
     151  ctagttccac gtctacaaaa gattagcaaa aagatgaaca tgcccataat
     201  cgctggtcga gtaattctca atttggacca tttgatagaa tacaagccag
     251  cacagatcga tctatataac accagagcat caaggacaca gctcagtaaa
     301  tggtttgagg ccatcaaagg agaatatgaa ctggacgatg acaaaatggg
     351  tgttatcatg aatgggttca tggtttggtg cattgaaaat ggaacttcac
     401  ctgatgtaaa tggggtttgg accatgatgg atggagatga gcaagtggaa
     451  tttccgctca agcccatcgt ggagaatgca aaacccacac tcagacaaat
     501  tatgcaccat ttctcagatg cagcagaggc gtatatcgag atgagaaatt
     551  ctgaagggtt caacatgccc aggtatggac tactgaggaa tttgagagac
     601  aagagcttag caaggtatgc tttcgatttt tatgaagtca catctaagac
     651  ttctgacaga gcaagggaag caatagcaca gatgaaggct gcagctctcg
     701  ccaacgttaa caccaggatg ttcggcctgg atgggaatgt ggcaacaact
     751  agtgagaaca ctgagaggca cactgctact gatgtcaatc agaacatgca
     801  ttcccttttg ggaatgacgc atgggcagta aa