Sequence of DPV Seoul virus

Seoul virus strain 80-39 segment S, complete sequence.

ACC No: AY273791

Dated: 2003-05-15 | Length: 1769 | CRC: 236704867

                !!NA_SEQUENCE 1.0
ID   AY273791   standard; mRNA; VRL; 1769 BP.
XX
AC   AY273791;
XX
SV   AY273791.1
XX
DT   15-MAY-2003 (Rel. 75, Created)
DT   15-MAY-2003 (Rel. 75, Last updated, Version 1)
XX
DE   Seoul virus strain 80-39 segment S, complete sequence.
XX
KW   .
XX
OS   Seoul virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Hantavirus.
XX
RN   [1]
RP   1-1769
RA   Song J.-W., Moon J.Y., Baek L.J., Song K.-J.;
RT   "Genetic analysis of the full length of S segment of Seoul virus prototype,
RT   80-39 strain";
RL   Unpublished.
XX
RN   [2]
RP   1-1769
RA   Song J.-W., Moon J.Y., Baek L.J., Song K.-J.;
RT   ;
RL   Submitted (09-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Department of Microbiology, College of Medicine, Korea University, 5-ka,
RL   Anam-dong, Sungbuk-ku, Seoul 136-705, Korea
XX
DR   GOA; Q808S4.
DR   SPTREMBL; Q808S4; Q808S4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1769
FT                   /country="South Korea"
FT                   /db_xref="taxon:11608"
FT                   /mol_type="mRNA"
FT                   /organism="Seoul virus"
FT                   /strain="80-39"
FT                   /isolation_source="Rattus norvegicus"
FT                   /segment="S"
FT   CDS             43. .1332
FT                   /codon_start=1
FT                   /db_xref="GOA:Q808S4"
FT                   /db_xref="SPTREMBL:Q808S4"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AAP33498.1"
FT                   /translation="MATMEEIQREISAHEGQLVIARQKVKDAEKQYEKDPDDLNKRALH
FT                   DRESVAASIQSKIDELKRQLADRIAAGKNIGQDRDPTGVEPGDHLKERSALSYGNTLDL
FT                   NSLDIDEPTGQTADWLTIIVYLTSFVVPIILKALYMLTTRGRQTSKDNKGMRIRFKDDS
FT                   SYEDVNGIRKPKHLYVSMPNAQSSMKAEEITPGRFRTAVCGLYPAQIKARNMVSPVMSV
FT                   VGFLALAKDWTSRIEEWLGAPCKFMAESPIAGSLSGNPVNRDYIRQRQGALAGMEPKEF
FT                   QALRQHSKDAGCTLVEHIESPSSIWVFAGAPDRCPPTCLFVGGMAELGAFFSILQDMRN
FT                   TIMASKTVGTADEKLRKKSSFYQSYLRRTQSMGIQLDQRIIVMFMVAWGKEAVDNFHLG
FT                   DDMDPELRSLAQILIDQKVKEISNQEPMKL"
XX
SQ   Sequence 1769 BP; 563 A; 337 C; 407 G; 462 T; 0 other;

AY273791  Length: 1769  December 5, 2003 15:01  Type: N  Check: 8640  ..

       1  tagtagtaga ctccctaaag agctactcca ctaacaagag aaatggcaac
      51  tatggaggaa atccagagag aaatcagtgc tcacgagggg cagcttgtga
     101  tagcacgcca gaaggtcaag gatgcagaaa agcagtatga gaaggatcct
     151  gatgacttaa acaagagggc actgcatgat cgggagagtg tcgcagcttc
     201  aatacaatca aaaattgatg aactgaagcg ccaacttgcc gacaggattg
     251  cagcagggaa gaacatcggg caagaccggg atcctacagg ggtagagccg
     301  ggtgatcatc tcaaggaaag atcagcacta agctacggga atacactgga
     351  cctgaatagt cttgacattg atgaacctac aggacaaaca gctgattggc
     401  tgactataat tgtctatcta acatcattcg tggtcccgat catcttgaag
     451  gcactgtaca tgttaacaac aagaggtagg cagacttcaa aggacaacaa
     501  ggggatgagg atcagattca aggatgacag ctcatatgag gatgtcaatg
     551  ggatcagaaa gcctaaacat ctgtatgtgt caatgccaaa cgcccaatcc
     601  agtatgaagg ctgaagagat aacaccagga agattccgca ctgcagtatg
     651  tgggctatat cctgcacaga taaaggcaag gaatatggta agccctgtca
     701  tgagtgtagt tgggtttttg gcactagcaa aagactggac atctagaatt
     751  gaagaatggc ttggcgcacc ctgcaagttc atggcagagt ctcctattgc
     801  tgggagttta tctgggaatc ctgtgaatcg tgactatatc agacaaagac
     851  aaggtgcact tgcagggatg gagccaaagg aatttcaagc cctcaggcaa
     901  cattcaaagg atgctggatg tacactagtt gaacatattg agtcaccatc
     951  gtcaatatgg gtgtttgctg gggcccctga taggtgtcca ccaacatgct
    1001  tgtttgttgg agggatggct gagttaggtg ccttcttttc tatacttcag
    1051  gatatgagga acacaatcat ggcttcaaaa actgtgggca cagctgatga
    1101  aaagcttcga aagaaatcat cattctatca atcatacctc agacgcacac
    1151  aatcaatggg aatacaactg gaccagagga taattgttat gtttatggtt
    1201  gcctggggaa aggaggcagt ggacaacttc catctcggtg atgacatgga
    1251  tccagagctt cgtagcctgg ctcagatctt gattgaccag aaagtgaagg
    1301  aaatctcgaa ccaggagcct atgaaattat aagcacataa atatgtaatc
    1351  aatactaact ataggttaag aaatactaat cattagttaa taagaataca
    1401  gatttattga ataatcatat taaataatta ggtaagttaa atattattta
    1451  gttaagttag ctaattgatt tatatgatta tcacaattga atgtaatcat
    1501  aagcacaatc actgccatgt ataatcacgg gtatacgggt ggttttcata
    1551  tggggaacag ggtgggctta gggccaggtc accttaagtg accttttttt
    1601  gtatatatgg atgtagattt caattgatcg aatactaatc ctactgtcct
    1651  cttttctttt cctttctcct tctttactaa caacaacaaa ctacctcaca
    1701  accttctacc tcaatatata ctacctcatt aagttgtttc cttttgtctt
    1751  tttagggagt ctactacta