Sequence of DPV Melon necrotic spot virus
Melon necrotic spot virus isolate MNSV264 29K protein, 89K protein, p7K protein, 14K protein, p7K protein, and 42K coat protein mRNAs, complete cds.
ACC No: AY330700
Dated: 2005-02-26 | Length: 4310 | CRC: -1409898783
!!NA_SEQUENCE 1.0
ID AY330700 standard; mRNA; VRL; 4310 BP.
XX
AC AY330700;
XX
SV AY330700.1
XX
DT 30-JAN-2004 (Rel. 78, Created)
DT 26-FEB-2005 (Rel. 83, Last updated, Version 2)
XX
DE Melon necrotic spot virus isolate MNSV264 29K protein, 89K protein, p7K
DE protein, 14K protein, p7K protein, and 42K coat protein mRNAs, complete
DE cds.
XX
KW .
XX
OS Melon necrotic spot virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC Carmovirus.
XX
RN [1]
RP 1-4310
RX PUBMED; 15195949.
RA Diaz J.A., Nieto C., Moriones E., Truniger V., Aranda M.A.;
RT "Molecular characterization of a Melon necrotic spot virus strain that
RT overcomes the resistance in melon and nonhost plants";
RL Mol. Plant Microbe Interact. 17(6):668-675(2004).
XX
RN [2]
RP 1-4310
RA Diaz J.A., Nieto C., Moriones E., Truninger V., Aranda M.A.;
RT ;
RL Submitted (26-JUN-2003) to the EMBL/GenBank/DDBJ databases.
RL Hortofruticultura Subtropical, Estacion Experimental La Mayora, Laboratorio
RL de Virologia, Algarrobo-Costa, Malaga 29750, Spain
XX
FH Key Location/Qualifiers
FH
FT source 1. .4310
FT /db_xref="taxon:11987"
FT /mol_type="mRNA"
FT /organism="Melon necrotic spot virus"
FT /isolate="MNSV264"
FT CDS 88. .2463
FT /codon_start=1
FT /db_xref="GOA:Q6VRG4"
FT /db_xref="InterPro:IPR002166"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="InterPro:IPR007095"
FT /db_xref="UniProt/TrEMBL:Q6VRG4"
FT /note="putative RNA-dependent RNA polymerase; produced by a
FT readthrough of the amber codon; replicase"
FT /transl_except=(pos:892. .894,aa:OTHER)
FT /product="89K protein"
FT /protein_id="AAR01965.1"
FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW
FT TSAISHDCSKIAKVAAVVGIGYLGVRIGAAWCRRTPGITNSIITYGEEVVEQVKVDINE
FT DAEEESDIGEEIVVGTIGIGIRTNVNPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS
FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSIAVPLVLSPDMYDISSKALLNSEILTENR
FT ATLDRLKTLDGWLTHLVCHPLSAKAWRRAIDNLCGLPDWKAFKLVNXGCLEELAGFCTS
FT VRRGTHPDMTEFPQDRPIKTRKLYCLGGVGTSVKFNVHNNSLANLRRGLIERVFFVEND
FT KKELEPAPKPLSGAFDRLTWFRRKLHNIVGTHSSISPGKFLDFYTGRRRTIYEGAVKSL
FT EGLSVQRRDAYLKTFVKAEKINTTKKPDPAPRVIQPRNVRYNVEVGRYLRRFEHYLYRG
FT IDEIWNGPTIIKGYTVEQIGKIARDAWDSFVSPVAIGFDMKRFDQHVSSDALKWEHSVY
FT LDAFCHDSYLAELLEWQLVNKGVGYASDGMIKYKVDGCRMSGDMNTAMGNCLIACAITH
FT DFFRSRGIRARLMNNGDDCVVICEKECAAVVKADMVRHWRQFGFQCELECDAEIFEQIE
FT FCQMRPVYDGEKYVMVRNPLVSLSKDSYSVGPWNGINHARKWVNAVGLCGLSLTGGIPV
FT VQSYYNMMIRNTQSVNSSGILRDVSFASGFRELARLGNRKSGAISEDARFSFYLAFGIT
FT PDLQRAMESDYDAHTIEWGFVPQGNLRIQPISWTLNEL"
FT CDS 88. .894
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:Q6VRG3"
FT /product="29K protein"
FT /protein_id="AAR01961.1"
FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW
FT TSAISHDCSKIAKVAAVVGIGYLGVRIGAAWCRRTPGITNSIITYGEEVVEQVKVDINE
FT DAEEESDIGEEIVVGTIGIGIRTNVNPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS
FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSIAVPLVLSPDMYDISSKALLNSEILTENR
FT ATLDRLKTLDGWLTHLVCHPLSAKAWRRAIDNLCGLPDWKAFKLVN"
FT CDS 2442. .2828
FT /codon_start=1
FT /db_xref="GOA:Q6VRG2"
FT /db_xref="InterPro:IPR007982"
FT /db_xref="InterPro:IPR009575"
FT /db_xref="UniProt/TrEMBL:Q6VRG2"
FT /note="produced by a readthrough of the amber codon"
FT /transl_except=(pos:2637. .2639,aa:OTHER)
FT /product="14K protein"
FT /protein_id="AAR01966.1"
FT /translation="MDSQRTVEQTNPRGRSKECGDSGGKQKNSMGRKIANDAISESKQG
FT VMGASTYIADKIKVTINFNFXGMACCRCDSSPGDYSGALLILFISFVFFYITSLSPQGN
FT TYVHHFDNSSVKTQYVGISTNGDG"
FT CDS 2442. .2639
FT /codon_start=1
FT /db_xref="GOA:Q6VRG1"
FT /db_xref="InterPro:IPR007982"
FT /db_xref="UniProt/TrEMBL:Q6VRG1"
FT /product="p7A protein"
FT /protein_id="AAR01962.1"
FT /translation="MDSQRTVEQTNPRGRSKECGDSGGKQKNSMGRKIANDAISESKQG
FT VMGASTYIADKIKVTINFNF"
FT CDS 2643. .2828
FT /codon_start=1
FT /db_xref="InterPro:IPR009575"
FT /db_xref="UniProt/TrEMBL:Q6VRG0"
FT /product="p7B protein"
FT /protein_id="AAR01963.1"
FT /translation="MACCRCDSSPGDYSGALLILFISFVFFYITSLSPQGNTYVHHFDN
FT SSVKTQYVGISTNGDG"
FT CDS 2815. .3987
FT /codon_start=1
FT /db_xref="GOA:Q6VRF9"
FT /db_xref="InterPro:IPR000937"
FT /db_xref="UniProt/TrEMBL:Q6VRF9"
FT /product="42K coat protein"
FT /protein_id="AAR01964.1"
FT /translation="MAMARRINNLPTVKLAKQALPLLANPKIVNKAIDVVPLVVQGGQK
FT LSKAAKRLLGAYGGNISYTEGAKPGAISAPVAISRRVAGMKPRFVRSEGSVKIVHREFI
FT ASVLPSNDLTVNNGDVNVGKYRVNPSNNALFTWLQGQAQLYDMYRFTRLRFTYIPTTGS
FT TSTGRVSILWDRDSQDPLPIDRAAISSYAHYADSAPWAENVLVVPCDNTWRYMNDTNAV
FT DRKLVDFGQFLFATYSGAGDTAHGDLYVEYAVEFKDPQPIAGMVCMFDRSVSFSEVGST
FT IKGVNYIADRDVITTGGNIGVNINIPGTYLVTIVLNATSIGSLTFTGNSKLVGNSLNVS
FT SSGTSALTFTLNSTGVPNSSNSSFSVGTVVALTRVRMTITRCSPETAYLA"
XX
SQ Sequence 4310 BP; 1068 A; 910 C; 1072 G; 1260 T; 0 other;
AY330700 Length: 4310 March 8, 2005 08:33 Type: N Check: 534 ..
1 ggattactct agccggatcc ccgactctct tgtttctgta agttagttcg
51 tgtattggtc atctgtcttg atcagtatag gttagcaatg gatactggtt
101 tgaaatttct tgtttctggg gggttagcca cctcatctgt tatcaggaaa
151 gtgagtgctg tgagttcatt ggattcgtcc cttccttcat catctatatt
201 atctgccatc catgggtctt ggactagtgc tatcagccac gattgtagta
251 aaattgccaa ggttgccgcc gtagttggta ttggttatct tggggtcagg
301 attggtgccg cttggtgccg tcgtactccc gggataacga attccataat
351 cacctatggg gaagaagtgg ttgagcaagt gaaggtagat attaatgaag
401 atgctgaaga ggagtccgat attggtgagg aaattgtggt tggtacgata
451 ggtattggta tacgcacaaa cgtcaaccct gaggttcgag ctaagcgcag
501 acatagatcg aggccattca ttaagaagat tgtgaattta acgaagaatc
551 acttcggtgg gtgccccgac tctagtaaat cgaatgtcat ggctgtaagc
601 aaattcgttt atgaacaatg caaacaacac aattgtcttc cacatcaaac
651 gagattgatc atgagtattg cagttccatt ggtgttaagt cccgatatgt
701 acgacatttc cagcaaagct ctgttaaaca gcgagatatt gacagaaaac
751 agagctacgc tggaccgcct taaaactctt gatgggtggc taacacattt
801 ggtgtgccat ccccttagcg cgaaggcttg gaggcgggcc attgacaact
851 tgtgtggtct tccagattgg aaggctttca agttggtcaa ctaggggtgc
901 ctagaggaac tcgctgggtt ctgtacttcg gtacggagag ggacacaccc
951 agacatgacc gagtttcctc aggatcgtcc cattaagaca cgcaaactgt
1001 attgtttagg gggagttgga actagcgtga agttcaacgt gcacaataac
1051 tctctagcta accttcggcg cggtctgatt gagcgcgttt tctttgttga
1101 aaatgataag aaggaactag agcctgcccc taaacctctt agtggtgcgt
1151 ttgatcgctt aacttggttt cgtcggaaac tccataatat tgtgggtact
1201 cattccagta ttagtccagg taaattcctg gacttttata ctggcaggag
1251 acgcacgatt tatgaaggtg ctgtgaaatc attggaaggg ttaagtgttc
1301 aacgaaggga tgcctatctg aaaacgtttg ttaaagcgga gaagattaat
1351 accactaaga agcctgaccc agctccgcgg gtcatacaac cgaggaacgt
1401 aagatataat gttgaggttg gtcgttatct acgtaggttt gagcattacc
1451 tctatcgagg aattgacgaa atctggaatg gccccaccat aattaaagga
1501 tacactgtcg agcaaattgg gaaaatcgcc cgtgacgctt gggactcttt
1551 cgttagtcca gtagcaatcg ggtttgacat gaaaaggttc gaccaacatg
1601 tatcctccga tgctcttaaa tgggaacata gtgtttatct tgatgctttt
1651 tgccacgact catatctcgc ggaattgtta gagtggcaat tagttaataa
1701 gggtgttggg tatgctagtg atggaatgat taaatataag gttgatgggt
1751 gccggatgag tggtgacatg aatacagcta tgggtaactg tttgattgcc
1801 tgtgctatca cgcacgattt cttccgtagt cgtggtatca gggcgcgttt
1851 gatgaacaat ggtgatgact gtgtcgtaat atgtgaaaaa gaatgtgccg
1901 cggtggttaa agccgacatg gtaaggcact ggagacaatt cgggtttcaa
1951 tgcgaacttg aatgcgacgc agaaatcttc gagcaaattg aattttgtca
2001 aatgcggcct gtgtacgacg gggagaaata tgtgatggtg cggaatcctt
2051 tggttagcct atctaaagat tcctactcag tcggcccttg gaatggaatc
2101 aaccatgcac gcaagtgggt taatgcagtt ggcttgtgtg gcttatccct
2151 cactggtgga attcctgttg tccaaagtta ttacaacatg atgatccgta
2201 acacccagtc cgtaaacagt tctggtatac ttcgcgatgt cagctttgct
2251 agtggatttc gggagttagc gcgattgggt aacaggaaaa gtggtgccat
2301 ttctgaagac gcccgtttta gcttttatct cgcatttggc attactccag
2351 atttacaacg tgccatggaa agtgactatg atgctcatac catagagtgg
2401 ggttttgtgc cccagggaaa tcttagaata cagccaatct catggactct
2451 caacgaactg tagaacaaac taatcctcgt ggaagaagta aagaatgtgg
2501 tgacagcggg ggaaaacaga agaactcaat ggggcgaaag atagccaatg
2551 atgctatctc cgaatcgaag caaggagtta tgggtgctag cacatacatt
2601 gctgataaaa ttaaggtgac tattaacttt aatttttagg gtatggcttg
2651 ttgccgttgc gactccagcc ccggggatta ctctggagca ttgcttatat
2701 tatttatctc atttgttttc ttttatatta cctcgcttag cccgcaagga
2751 aatacttacg ttcatcactt cgataattct tccgttaaaa cacaatacgt
2801 tggcatctct acaaatggcg atggctagac gcattaacaa tttacccact
2851 gtgaagcttg ctaagcaggc tctacccctg ctagcgaacc ctaaaattgt
2901 gaataaagct atagatgtgg ttcctttggt cgtccaaggt ggtcagaaat
2951 tgtccaaggc cgctaagcga ttgcttggtg cttatggagg caacatttcg
3001 tatactgagg gtgccaaacc aggcgcaata tcagctcctg tcgctattag
3051 tcggcgagtg gctggcatga agcctaggtt tgttcgatcg gaaggatctg
3101 taaagatagt tcatagggag tttattgcct ctgttcttcc ttcgaatgat
3151 ctcactgtta ataatggtga tgtcaacgtt ggcaagtata gagtcaatcc
3201 cagtaataac gctttattca catggcttca gggacaagcg caactatatg
3251 atatgtacag gtttactcgg ctccgtttca cctatattcc tactaccgga
3301 tcgacttcca ccggtcgtgt ctctatcctt tgggatagag attctcagga
3351 ccccctccct attgatcgtg ctgccattag ctcttatgct cattacgctg
3401 attcagcgcc ttgggctgag aatgtcctag tggttccttg tgacaatacg
3451 tggaggtaca tgaatgatac caatgccgtc gaccggaagt tggttgattt
3501 tgggcagttc cttttcgcta cttattctgg tgctggtgac accgcccatg
3551 gtgatcttta cgtcgagtat gctgttgaat tcaaggaccc ccagcctatc
3601 gctgggatgg tatgtatgtt tgatcgctct gtctccttct ctgaagttgg
3651 gtctactatt aagggagtca attatattgc tgatcgtgat gtgataacca
3701 ctgggggcaa tattggtgtt aacatcaaca ttcccgggac ttatctcgtt
3751 acgattgttc ttaatgccac atcgattggt tccctcacct tcactggcaa
3801 ttctaaactt gtaggcaaca gtcttaatgt ttccagcagt ggtacatctg
3851 ctcttacgtt cacccttaac tccactggtg tgcccaatag tagcaattct
3901 tcgttctctg tgggtaccgt tgttgcattg actagggtgc gtatgacgat
3951 cactcgctgc tctccagaaa ctgcctacct cgcctaaatc tcgccttagg
4001 tttacggtta cccgagcttc gcctgaaacg gcgttcctct aattccttcc
4051 tggttctttc cctccacggc tcgcgtgttc tgcggaactg catctgcttc
4101 acttccttct ttttccctct gtggtggtac gaccaatggg tggctcccat
4151 tgactgcgta ggacatggaa aaagattgag tggagtgcac gaagcgtcgc
4201 aagatcgctg cctgacgagg tccagccaat caaataccaa acatctggtt
4251 tgggggcgga ttggctgtat gtcatgtaag tttgaggggt tctatcggag
4301 ccccccgccc