Sequence of DPV Papaya ringspot virus

Papaya ringspot virus P isolate Mex.CpT-15.5 proteinase P1 (P1) gene, partial cds.

ACC No: AY438009

Dated: 2003-11-09 | Length: 1641 | CRC: -1252340225

                !!NA_SEQUENCE 1.0
ID   AY438009   standard; genomic RNA; VRL; 1641 BP.
XX
AC   AY438009;
XX
SV   AY438009.1
XX
DT   09-NOV-2003 (Rel. 77, Created)
DT   09-NOV-2003 (Rel. 77, Last updated, Version 1)
XX
DE   Papaya ringspot virus P isolate Mex.CpT-15.5 proteinase P1 (P1) gene,
DE   partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus P
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; Papaya ringspot virus.
XX
RN   [1]
RP   1-1641
RA   Noa-Carrazana J.C., Ruiz-Castro B.S., Silva-Rosales L.;
RT   "Incidence and distribution of papaya mosaic virus and papaya ringspot
RT   virus in papaya plants in Mexico";
RL   Unpublished.
XX
RN   [2]
RP   1-1641
RA   Noa-Carrazana J.C., Ruiz-Castro B.S., Silva-Rosales L.;
RT   ;
RL   Submitted (14-OCT-2003) to the EMBL/GenBank/DDBJ databases.
RL   Ing. Genetica, Cinvestav-Irapuato, Km 9.6 Libramiento Norte carr.
RL   Irapuato-leon, Irapuato, Gto 36500 Apt. Postal 629, Mexico
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1641
FT                   /country="Mexico:Chiapas, Tapachula"
FT                   /db_xref="taxon:12206"
FT                   /mol_type="genomic RNA"
FT                   /organism="Papaya ringspot virus P"
FT                   /strain="PRSV-P"
FT                   /isolate="Mex.CpT-15.5"
FT   gene            1. .>1641
FT                   /gene="P1"
FT   CDS             1. .>1641
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="proteinase P1"
FT                   /protein_id="AAR12182.1"
FT                   /translation="MSSLYVLRPAAQHDRRMESKKGSGWIERKLEWKGDTGNTHYCSEF
FT                   HISKGAKILQLVQIGDAEIGRAFLEGNKFIRANIFEIIRKTMVGRLGYDFDSELWVCHN
FT                   CDKTSGKYFKKCDCGEKYYYSERNLIRTMQDLMYQFDMTPSEIDSIDFDYLADAVEYAE
FT                   QSVKRSQVPEPVELAIMETIATSEEGVLMSSGSEVVPTTTKVEEAWTIQIGEIPVPLVV
FT                   FKETPVVSGVNRTLNSTDFSLEAGITKLVEKEDLQKEVKEAVHLALEVGNEIAKRKPEL
FT                   KLMPYWSASLELHKRIRKHKEHAKEAAKQIQKEREKHQKIFSDLESRLNLKSRRRNQTV
FT                   VCDKRGTLKWKTRQGYKKNRLVQQVSDSVVTQIHCDFGCEPQCFKPHLLGIKQATSKKF
FT                   RKSRKQPRIVGNNKINYVMKNLCNTVVERSIPVELVTKRCKRRILQKDGRSYVQLRHMD
FT                   GIRAQRDVSSSRDMEQLFTQFCKFLVGHKPLKSGNLTFGSSGLIFKPKFGDNVGRYFGD
FT                   YFIVRGRLNGRLFDGRSKLARSIYAKMEQY"
XX
SQ   Sequence 1641 BP; 536 A; 286 C; 403 G; 416 T; 0 other;

AY438009  Length: 1641  November 25, 2003 09:13  Type: N  Check: 33  ..

       1  atgtcttctt tgtacgtttt gcgaccagca gctcagcacg ataggaggat
      51  ggaaagcaag aaaggttctg gttggataga acgcaaactt gagtggaaag
     101  gggatacagg aaacacccac tattgtagtg agtttcacat tagcaagggc
     151  gccaaaattc tgcaattggt gcaaattggt gatgccgaaa tcggaagggc
     201  cttcctggaa ggtaacaaat ttattcgtgc gaatatattt gagatcattc
     251  ggaaaaccat ggttggtcgt ctgggatatg atttcgacag tgaactatgg
     301  gtttgtcaca actgtgacaa aacttctgga aaatacttca agaagtgtga
     351  ctgtggggaa aaatattact attctgagag aaacctgata agaacaatgc
     401  aagacctgat gtatcagttt gacatgacac catcagaaat cgactccatc
     451  gattttgact atcttgctga cgcagtggaa tatgctgaac agtcagttaa
     501  gagatctcaa gttccggaac ctgtggaact tgcaataatg gaaacaattg
     551  cgactagtga ggaaggtgtt ttaatgtctt ctggatcaga agttgtgccc
     601  acaaccacta aagttgaaga agcatggacg atacaaattg gggaaattcc
     651  tgtcccactt gtcgtcttta aggaaacgcc agttgtcagt ggtgtgaata
     701  gaactctgaa ctcaactgat ttctcacttg aagctggtat tacaaaactg
     751  gtagagaagg aagaccttca gaaggaggta aaagaagcag tgcatctggc
     801  gctcgaagtt ggtaatgaaa ttgccaagag gaagcctgaa ctcaagctaa
     851  tgccatactg gagtgctagt cttgagttac acaagaggat tcgcaagcat
     901  aaggagcatg caaaggaggc agcaaaacaa attcagaagg aaagagagaa
     951  acaccaaaag atattctcag atttggagtc aaggcttaac ctaaaatcca
    1001  ggagaagaaa tcaaactgtg gtctgtgaca aaagaggcac acttaagtgg
    1051  aaaacccgac aagggtacaa gaagaataga ctagtgcaac aagtgagtga
    1101  ctctgttgtc actcaaattc attgtgactt tggttgtgaa cctcaatgtt
    1151  ttaaacctca ccttcttggc atcaagcaag ctacatctaa gaagtttcgc
    1201  aaatcgcgta agcaaccaag aattgttggt aataacaaga taaattatgt
    1251  catgaaaaat ctgtgtaaca cagttgttga aagaagcatt cctgtggagc
    1301  ttgttacaaa gcgatgcaaa agaagaattc ttcaaaagga tggcaggagc
    1351  tatgtacagc taagacatat ggatggcatt cgtgcacaac gagatgtgag
    1401  tagctcgcgc gatatggagc agttgtttac gcaattttgc aaattcttgg
    1451  ttgggcacaa gccacttaaa tccgggaatc tgacgttcgg ttctagtggt
    1501  ctgattttca agccaaagtt tggcgacaat gtggggcgat actttggtga
    1551  ctatttcatt gttcgaggac gtcttaacgg taggttattt gatggtagat
    1601  caaaactagc gagatcaata tatgccaaga tggagcaata c