Sequence of DPV Papaya ringspot virus

Papaya ringspot virus P isolate Mex.VrAl-18.1 proteinase P1 (P1) gene, partial cds.

ACC No: AY438013

Dated: 2003-11-09 | Length: 1641 | CRC: 761831573

                !!NA_SEQUENCE 1.0
ID   AY438013   standard; genomic RNA; VRL; 1641 BP.
XX
AC   AY438013;
XX
SV   AY438013.1
XX
DT   09-NOV-2003 (Rel. 77, Created)
DT   09-NOV-2003 (Rel. 77, Last updated, Version 1)
XX
DE   Papaya ringspot virus P isolate Mex.VrAl-18.1 proteinase P1 (P1) gene,
DE   partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus P
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; Papaya ringspot virus.
XX
RN   [1]
RP   1-1641
RA   Noa-Carrazana J.C., Ruiz-Castro B.S., Silva-Rosales L.;
RT   "Incidence and distribution of papaya mosaic virus and papaya ringspot
RT   virus in papaya plants in Mexico";
RL   Unpublished.
XX
RN   [2]
RP   1-1641
RA   Noa-Carrazana J.C., Ruiz-Castro B.S., Silva-Rosales L.;
RT   ;
RL   Submitted (14-OCT-2003) to the EMBL/GenBank/DDBJ databases.
RL   Ing. Genetica, Cinvestav-Irapuato, Km 9.6 Libramiento Norte carr.
RL   Irapuato-leon, Irapuato, Gto 36500 Apt. Postal 629, Mexico
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1641
FT                   /country="Mexico:Veracruz, Alamo"
FT                   /db_xref="taxon:12206"
FT                   /mol_type="genomic RNA"
FT                   /organism="Papaya ringspot virus P"
FT                   /strain="PRSV-P"
FT                   /isolate="Mex.VrAl-18.1"
FT   gene            1. .>1641
FT                   /gene="P1"
FT   CDS             1. .>1641
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="proteinase P1"
FT                   /protein_id="AAR12186.1"
FT                   /translation="MSSLYTLRAAAQYDRRLEIKKGAGWIEHKLERKGDKGNTHYCSEF
FT                   DISKGAKILQLVQIGSAEVGRTFLEGNRFVRANIFEIIRKTMVGRLGYDFESELWVCHN
FT                   CDRTSEKYFKKCDCGEKYYYSERNLMKTMNDLTYQFDMTPSEINSVDFDYLADAVDYAE
FT                   RSVQKSQVPEPVELVMVEPIAASEEGILMVSEPEVVPATTKIEDTWTIQIGEIPVPLVV
FT                   IKETPVISGVNGTLNSTGFSLEAEITKLVEKEVSHEKVKEAVHLALEVGNEIAEKKPEL
FT                   KLIPYWSASLELHKRIRKHKEHAKIAAIQVHKEREKNPKIFSILESEAQLKIQKRSQTV
FT                   VCDKRGTLNGKPDKVTRRVNSCNKRVTLLSLRLIVILVVNLNILNLHSSGIKIATSKKV
FT                   HKPRKLSRIVGNNKINYVMKHLCDTIIERSIPVELVTKRCKRRILQKKGRSYVQLRHMD
FT                   GIRAQQDVSSSPDMERLFTQFCKFLVGHKPLKSENLTFGSSGLIFKPKFAANVGRYFGD
FT                   YFVVRGRLEGKLFDGRSKLARSIYARMEQY"
XX
SQ   Sequence 1641 BP; 525 A; 293 C; 402 G; 421 T; 0 other;

AY438013  Length: 1641  November 25, 2003 09:13  Type: N  Check: 2237  ..

       1  atgtcttctt tgtatacctt gcgagcagca gctcagtacg ataggaggtt
      51  ggagattaag aaaggtgctg gctggatcga gcacaaatta gaaaggaaag
     101  gggataaagg aaacactcac tattgtagtg agtttgacat tagcaagggt
     151  gccaaaattc tgcaattggt acaaattggt agtgctgaag ttggaaggac
     201  cttcctggag ggtaacagat ttgtccgtgc gaacatattt gagatcatcc
     251  ggaaaaccat ggttggtcgt ctaggatatg atttcgagag tgaactatgg
     301  gtctgtcaca actgcgacag aacttctgaa aaatacttca agaagtgtga
     351  ctgcggggaa aaatattatt actctgaaag aaacctgatg aaaacaatga
     401  acgacctgac gtatcaattt gacatgacac cgtcagagat caactccgtc
     451  gactttgatt accttgctga tgcagtggat tatgctgaac ggtcagtcca
     501  gaaatctcaa gttccggaac ctgtggaact tgtaatggtg gaaccaattg
     551  cggctagtga ggaaggtatt ctaatggttt ctgaaccaga agttgtacct
     601  gcaactacca aaattgaaga tacatggacg atacagattg gggaaattcc
     651  tgtcccactt gtcgttatca aagagacgcc agttatcagt ggtgtgaacg
     701  gaactttgaa ctcaactggt ttctcacttg aagctgagat tacaaaactg
     751  gtggagaagg aagtctctca cgaaaaggtt aaagaagcag tgcatctggc
     801  actcgaagtt ggtaacgaga ttgctgagaa gaagcctgaa ctcaagctaa
     851  taccatactg gagtgctagc cttgagttgc acaagagaat tcgtaagcat
     901  aaggagcatg ctaagattgc agcaattcaa gttcataagg aaagagaaaa
     951  gaatccaaag atattctcaa ttctagagtc cgaggctcaa cttaaaatcc
    1001  agaagagaag tcaaactgtg gtctgtgaca aaagaggcac acttaatgga
    1051  aaacccgaca aggtcacaag aagagtaaac tcatgcaaca agcgagtgac
    1101  tctgttgtca ctcagattaa ttgtgatttt ggttgtgaac ctcaatattc
    1151  tgaaccttca ctcttctggc attaaaatag cgacatccaa gaaggtccac
    1201  aaaccgcgca agctatcgag gattgttggt aataacaaga taaattatgt
    1251  catgaaacat ctgtgtgaca caattatcga aagaagcatt cctgtggagc
    1301  ttgttacaaa gcgatgcaag agaaggattc ttcagaagaa aggtagaagc
    1351  tatgtgcagt tgaggcatat ggatggcatt cgtgcacaac aagatgtgag
    1401  tagctcgccc gatatggagc ggttattcac gcaattttgc aaatttttag
    1451  ttgggcacaa accactcaaa tccgaaaatc tgacgtttgg ttctagtggt
    1501  ctgattttta agccaaagtt tgccgccaat gtggggcgat attttggtga
    1551  ttatttcgtt gttcgaggac gtcttgaagg taagctattt gatggtagat
    1601  caaaactagc gagatcgatc tatgccagga tggagcaata c