Sequence of DPV Sweet potato feathery mottle virus
Sweet potato feathery mottle virus isolate Putisrabe polyprotein gene, partial cds.
ACC No: AY459597
Dated: 2005-04-16 | Length: 1292 | CRC: -1200021853
!!NA_SEQUENCE 1.0
ID AY459597 standard; genomic RNA; VRL; 1292 BP.
XX
AC AY459597;
XX
SV AY459597.1
XX
DT 01-DEC-2004 (Rel. 82, Created)
DT 16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE Sweet potato feathery mottle virus isolate Putisrabe polyprotein gene,
DE partial cds.
XX
KW .
XX
OS Sweet potato feathery mottle virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1292
RA Ateka E.M., Barg E., Njeru R.W., Vetten H.J.;
RT "Biological serological and molecular variability of Sweet potato feathery
RT mottle potyvirus";
RL Unpublished.
XX
RN [2]
RP 1-1292
RA Ateka E.M., Barg E., Njeru R.W., Vetten H.J.;
RT ;
RL Submitted (06-NOV-2003) to the EMBL/GenBank/DDBJ databases.
RL Institute for Plant Virology, Microbiology and Biosafety, Federal
RL Biological Research Center for Agriculture and Forestry, Messeweg 11/12,
RL Braunschweig 38104, Germany
XX
FH Key Location/Qualifiers
FH
FT source 1. .1292
FT /country="Madagascar"
FT /db_xref="taxon:12844"
FT /mol_type="genomic RNA"
FT /note="acronym: SPFMV"
FT /organism="Sweet potato feathery mottle virus"
FT /strain="EA"
FT /isolate="Putisrabe"
FT CDS <1. .1071
FT /codon_start=1
FT /db_xref="GOA:Q5QIY1"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProt/TrEMBL:Q5QIY1"
FT /product="polyprotein"
FT /protein_id="AAS38443.1"
FT /translation="LKALYTGVQPSASELSAYTRVLKEMYDDSMLQENDLEVYHQSDES
FT TEFKNAGADPPAPKPKNIPPPPTITEITDPEDPKQAALKAARAKQPAVIPESYGRDTSK
FT EKESIVGTSSKGVRDKDVNVGTVGTFVVPRVKMNANKKRQPMVNGRAIINFQHLSTYEP
FT EQFEVANTRSTQEQFRAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTM
FT MDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDM
FT SLARYAFDFYELHSTTPARAKEAHLQMKAAALKNARNRLFGLDGNVSTQEEDTERHTTT
FT DVTRNIHNLLGMRGVQ"
FT mat_peptide 124. .1068
FT /product="coat protein"
XX
SQ Sequence 1292 BP; 408 A; 248 C; 312 G; 324 T; 0 other;
AY459597 Length: 1292 April 19, 2005 08:49 Type: N Check: 5527 ..
1 ctcaaagcac tgtatactgg tgttcaacct agtgcttctg aattgagtgc
51 gtatacgaga gtgctcaaag aaatgtatga tgacagtatg ctccaagaga
101 atgatttgga agtatatcat caatctgatg agagcactga atttaaaaat
151 gcaggagcgg accctccagc ccctaagcct aagaacattc ctccaccacc
201 cacaataact gaaatcactg atccagagga cccgaagcag gcagctttga
251 aagctgcacg agcaaagcaa cccgcagtca ttccagaatc atatggacga
301 gacacgagca aagaaaaaga gtcaatagtg gggacatcat caaagggcgt
351 gagggataaa gatgtgaatg ttggcactgt tggtacattt gttgtgccac
401 gtgtcaagat gaatgcaaat aagaaaaggc aaccaatggt caatggaagg
451 gccattataa atttccagca cttgtcaaca tatgaaccag agcagtttga
501 ggttgcaaac actcggtcga ctcaagaaca gttccgagca tggtatgaag
551 gagttaaagg ggattatggt gttgacgaca caggaatggg gatcttattg
601 aacggactaa tggtttggtg cattgaaaat ggcacatccc caaatataaa
651 tggtgtgtgg acaatgatgg acggtgatga acaggtgaca tatccaatca
701 aaccattatt ggaccatgca gtgcctactt ttaggcagat tatgacgcac
751 ttcagtgacg ttgctgaagc ctatatagag atgcgaaacc gtacaaaggc
801 gtacatgcca agatatggtc tacaacgtaa tttgactgat atgagtcttg
851 cgcgatatgc atttgatttt tacgagctgc attcaactac acctgcacgt
901 gctaaagaag cacatctaca gatgaaggca gccgcactta agaatgcgcg
951 aaatcggttg tttggtttgg acggaaacgt ctccacgcaa gaagaagata
1001 cggagaggca cacgacaact gatgttacta gaaatataca taacctctta
1051 ggaatgaggg gtgtgcaata ggacatcctc tgcactgtag cttatactta
1101 tgttaccttt agtatgcctt taatttaaat tcgtatcttt cagtcccgaa
1151 ggagatggtt ggaatgcata acgtggtggg attatatctc ggttattgca
1201 tttgagaagt cacctttcta ttacgtatca taagggactc ttaaaagtga
1251 ggagtacctc gtaagaaaag cctttttggt tcgtgatcga gc