Sequence of DPV Sweet potato feathery mottle virus

Sweet potato feathery mottle virus isolate Canar3 polyprotein gene, partial cds.

ACC No: AY459600

Dated: 2005-04-16 | Length: 1782 | CRC: 780093760

                !!NA_SEQUENCE 1.0
ID   AY459600   standard; genomic RNA; VRL; 1782 BP.
XX
AC   AY459600;
XX
SV   AY459600.1
XX
DT   01-DEC-2004 (Rel. 82, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Sweet potato feathery mottle virus isolate Canar3 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1782
RA   Ateka E.M., Barg E., Njeru R.W., Vetten H.J.;
RT   "Biological serological and molecular variability of Sweet potato feathery
RT   mottle potyvirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1782
RA   Ateka E.M., Barg E., Njeru R.W., Vetten H.J.;
RT   ;
RL   Submitted (06-NOV-2003) to the EMBL/GenBank/DDBJ databases.
RL   Institute for Plant Virology, Microbiology and Biosafety, Federal
RL   Biological Research Center for Agriculture and Forestry, Messeweg 11/12,
RL   Braunschweig 38104, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1782
FT                   /country="Spain:Canary Islands"
FT                   /db_xref="taxon:12844"
FT                   /mol_type="genomic RNA"
FT                   /note="acronym: SPFMV"
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /strain="EA"
FT                   /isolate="Canar3"
FT   CDS             <1. .1562
FT                   /codon_start=3
FT                   /db_xref="GOA:Q5QIX8"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProt/TrEMBL:Q5QIX8"
FT                   /product="polyprotein"
FT                   /protein_id="AAS38446.1"
FT                   /translation="DNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANGDDLLLAMRPDT
FT                   AHLLDKFGGCFSELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKLEPERIVSILEW
FT                   DRSHEPIHRLEAICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELARSGKAPYIAETA
FT                   LKALYTGVQPNASELSAYTRVLKEMYDDSVLQENDLEVYHQSNENTGFKDAGADPPAPK
FT                   PKNIPPPPTITEITDPEDPKQAALKAARAKQPAVIPESYGRDASKERESIVGASSKGVK
FT                   DKDVNVGTVGTFVVPRVLMNASKKRQPMVNGRAIINFQHLSTYEPEQFEVANTRSTQEQ
FT                   FQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDGDEQVTYPIKPL
FT                   LDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLARYAFDFYELHS
FT                   TTPARAKEAHLQMKAAALKNAKNRSFGLDGNVSTQEEDTERHTTTDVTRNIHNLLGMRG
FT                   VH"
FT   mat_peptide     615. .1559
FT                   /product="coat protein"
XX
SQ   Sequence 1782 BP; 549 A; 334 C; 428 G; 471 T; 0 other;

 AY459600  Length: 1782  April 19, 2005 08:49  Type: N  Check: 7770  ..

       1  ttgataatac acttatggtt gtgttggcag ttcactacac actgctgaaa
      51  ctaggaatcc aagaaagcga atttgataaa tgctgtgtct ttttcgcaaa
     101  tggtgatgat ttattgttgg caatgaggcc agatacagcc catttactgg
     151  ataagtttgg tggatgtttt tctgaattag gactcaatta tgacttttca
     201  tcacgaacaa ataagaaaga agatctatgg tttatgtcac actgtggtgt
     251  gaaacgtgat ggaatattta ttccgaagtt ggagcctgaa aggatcgttt
     301  caattcttga atgggatcgt tcacacgagc caattcatcg actggaagca
     351  atatgtgccg cgatggtgga atcatggggt tatgatgaac ttcttcatca
     401  tattaggaag ttctatgcat gggttttgga ccaagcccca tacaacgagc
     451  tagcacgaag tgggaaagca ccatacatag ctgaaactgc gctcaaagca
     501  ctctatactg gtgttcaacc taatgcttct gaattgagtg cgtatacgag
     551  agtgctcaaa gaaatgtatg atgacagtgt gcttcaagag aatgatttgg
     601  aagtatatca tcaatccaat gagaacactg gatttaaaga tgcaggagcg
     651  gaccctccag cccctaagcc taagaacatt cctccaccac ccacaataac
     701  tgaaatcact gatccagaag acccgaagca ggcagctttg aaagctgcac
     751  gagcaaaaca acccgcagtc attccagaat catatggacg agacgcgagc
     801  aaagaaaggg agtcaatagt gggggcatca tcaaagggtg tgaaggataa
     851  agatgtgaat gttggcaccg ttggtacatt tgttgtgcca cgtgtcttga
     901  tgaatgcaag caagaaaagg caaccaatgg tcaatggaag ggccattata
     951  aatttccagc acttgtcaac atatgaacca gagcagtttg aggttgcaaa
    1001  tacccggtcg actcaagaac agttccaagc atggtatgaa ggagttaaag
    1051  gagattatgg tgttgacgac acaggaatgg ggatcttatt gaatggacta
    1101  atggtttggt gcattgaaaa tggcacatcc ccaaacataa atggtgtgtg
    1151  gacaatgatg gatggtgatg agcaagtgac atacccaatt aaaccattac
    1201  tggaccatgc agtgcctact tttaggcaga ttatgacgca cttcagtgac
    1251  gttgctgaag cttacataga gatgcgaaac cgtacaaagg catacatgcc
    1301  aaggtatggt ctacaacgta atttgactga tatgagtctt gcgcgatatg
    1351  catttgattt ctacgagctg cattcaacca cccctgcacg tgctaaagaa
    1401  gcacatttac agatgaaggc agccgcactt aagaatgcga aaaatcggtc
    1451  gtttggtttg gatggaaacg tctccacgca agaagaagat acggagaggc
    1501  acacgacaac tgacgttact agaaatatac ataacctctt aggaatgagg
    1551  ggtgtgcact aggacatcct ctgcactgta gtttatactt atgttatctt
    1601  tagtatgcct ttaatttaaa ttcgtgtctt tcagtcccga aggagatggt
    1651  tgagtgcata acatggtggg attatatctc ggttattgca tttgagaagt
    1701  cgcctttcta ttacgtatca taagggactc ttaaaagtga ggagtacctc
    1751  gtaagaaaag cctttttggt tcgtgatcga gc