Sequence of DPV Sweet potato virus 2

Sweet potato virus Y isolate Zambia polyprotein gene, partial cds.

ACC No: AY459610

Dated: 2007-03-11 | Length: 1835 | CRC: 1052926910

                
ID   AY459610; SV 1; linear; genomic RNA; STD; VRL; 1835 BP.
XX
AC   AY459610;
XX
DT   01-DEC-2004 (Rel. 82, Created)
DT   11-MAR-2007 (Rel. 91, Last updated, Version 3)
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DE   Sweet potato virus Y isolate Zambia polyprotein gene, partial cds.
XX
KW   .
XX
OS   Sweet potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; unclassified Potyvirus.
XX
RN   [1]
RP   1-1835
RX   PUBMED; 17136503.
RA   Ateka E.M., Barg E., Njeru R.W., Thompson G., Vetten H.J.;
RT   "Biological and molecular variability among geographically diverse isolates
RT   of sweet potato virus 2";
RL   Arch. Virol. 152(3):479-488(2007).
XX
RN   [2]
RP   1-1835
RA   Ateka E.M., Barg E., Njeru R.W., Thompson G., Vetten H.J.;
RT   ;
RL   Submitted (06-NOV-2003) to the EMBL/GenBank/DDBJ databases.
RL   Institute for Plant Virology, Microbiology and Biosafety, Federal
RL   Biological Research Center for Agriculture and Forestry, Messeweg 11/12,
RL   Braunschweig 38104, Germany
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1835
FT                   /organism="Sweet potato virus Y"
FT                   /isolate="Zambia"
FT                   /mol_type="genomic RNA"
FT                   /country="Zambia"
FT                   /db_xref="taxon:225962"
FT   CDS             <1. .1624
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q5QIW8"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q5QIW8"
FT                   /protein_id="AAS37690.1"
FT                   /translation="STVVDNTLMVVLAMTYSLCKMNIKPEVHDQICVYFANGDDLLIAI
FT                   DPTYEWILDSLGKLFGELGLNYDFSSRTKNKEDLWFMSHCGIKREGIFIPKLEQERIVS
FT                   ILEWDRSHEPIHRLEAICAAMVEAWGYDELLQHIRKFYAWVLDQAPYSELARHGKAPYI
FT                   AETALRALYTCIEPAKEDLSGYARILELMYDDDISFGMSEPVYHQSGSEETKDAGKPTQ
FT                   PKPSQTRAPQTRPLKTPEDIRNPVDPPPPNIEEVIEEETPAQKALREARGKQPATEPLV
FT                   SYGRDTGPKSPKTVTTTGGIRDRDVNAGTVGIFTVPRLQITSSKKRLPLVDGRPVINLD
FT                   HLAIYDPEQVNLANTRSTQEQFKAWYDGVEGDYGVTDEEMSILLNGLMVWCIENGTSPN
FT                   INGMWVMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDIAEAYIEKRDRIKAYMPRYGL
FT                   QRNLTDMSLARYAFDFYELHPNTPVRAREAHMQMKAAALKNAKNRLFGLDGNVSTQDED
FT                   TERHTTTDVTRNIHNLLGMRGVQ"
FT   mat_peptide     <1. .625
FT                   /product="NIb protein"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT   mat_peptide     626. .1621
FT                   /product="coat protein"
FT                   /inference="non-experimental evidence, no additional
FT                   details recorded"
FT   3'UTR           1625. .1835
XX
SQ   Sequence 1835 BP; 606 A; 334 C; 417 G; 478 T; 0 other;

ay459610 Length: 1835  11-MAR-2007  Type: N  Check: 7509  ..

       1  ttcaacagtt gtggataaca ctcttatggt ggttctagca atgacatact
      51  ctttatgcaa aatgaatatt aaacctgagg ttcatgatca aatctgtgtt
     101  tattttgcaa atggggatga tttactcata gccattgatc ctacatatga
     151  gtggattttg gactcactcg ggaaattgtt tggagaactg ggtttaaatt
     201  atgatttttc atcacggaca aagaataaag aggatttgtg gttcatgtcc
     251  cattgtggaa taaaacgaga ggggattttt attccaaaat tggagcagga
     301  aaggattgtc tctatactcg aatgggacag atcacatgag cctattcata
     351  ggttggaagc aatttgcgcg gctatggtag aagcctgggg ttacgatgag
     401  ttgctacaac acatcagaaa gttctatgca tgggtccttg atcaagctcc
     451  atacagtgaa ttagcaagac atggaaaggc gccatatatt gcggaaacag
     501  ctttaagagc tctttacaca tgcattgaac cagcaaaaga ggatttatct
     551  gggtatgctc ggattttgga gctaatgtat gatgatgaca ttagttttgg
     601  aatgagtgaa cctgtatatc atcagtcagg aagtgaggaa actaaagatg
     651  ccggaaaacc aactcagcca aaacctagtc aaacaagagc acctcaaact
     701  cgaccattga aaacacctga agatattagg aatccagttg atccaccacc
     751  accaaacata gaagaggtga ttgaagaaga aacaccagca cagaaagctc
     801  tcagagaggc tagaggaaaa caaccagcaa ccgaaccact cgtgtcctat
     851  ggaagagaca cagggcccaa aagcccaaaa accgtcacta cgacaggtgg
     901  catcagggat agggatgtta atgctggaac agtgggaatt ttcactgtac
     951  ctcgattaca aataacttca agcaagaaga gattaccact tgttgatgga
    1001  cgtccagtaa tcaacctgga tcacttggca atatatgatc cagaacaagt
    1051  caatcttgca aataccagat caacacaaga acaatttaaa gcctggtatg
    1101  atggagttga aggagactat ggagtcacag acgaagagat gagtatactc
    1151  ctgaatggtc tcatggtttg gtgtattgaa aatggaacat caccaaatat
    1201  aaatggaatg tgggtgatga tggacggtga tgaacaagta acatatccaa
    1251  taaaacctct attggatcat gcagtcccca catttcgaca gatcatgaca
    1301  catttcagcg acatcgctga agcgtatatt gagaaaagag acaggattaa
    1351  agcgtacatg ccaaggtatg gcttgcagag gaatttgact gatatgagtc
    1401  ttgcgcggta tgcatttgat ttctatgaat tgcatcctaa cacaccagtt
    1451  agagcacgag aagcacacat gcagatgaag gcagcagcct taaagaatgc
    1501  aaagaaccgc ctgtttggtt tagatggaaa cgtctccacg caagatgagg
    1551  atacggagag acacacaaca actgatgtaa caagaaatat acataaccta
    1601  ttaggaatga ggggtgtgca ataaaccata tattgctcgt attttctttc
    1651  agttagtttt tagtttaaat tcgtgttctt cagtcccgaa gagtgttggt
    1701  tgggtttagt aataacttgt ggttttacca ccgttgctaa atctgagaaa
    1751  acctctttct attacgtatc ataagggact cttaaaagtg agtctttgac
    1801  tcgtaagaaa agcctttttg gttcgtgatc gagcc