Sequence of DPV Sweet potato virus C

Sweet potato feathery mottle virus isolate 45/3S polyprotein gene, partial cds.

ACC No: AY523544

Dated: 2005-04-16 | Length: 1164 | CRC: -423251321

                !!NA_SEQUENCE 1.0
ID   AY523544   standard; genomic RNA; VRL; 1164 BP.
XX
AC   AY523544;
XX
SV   AY523544.1
XX
DT   31-JAN-2005 (Rel. 82, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Sweet potato feathery mottle virus isolate 45/3S polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1164
RA   Ateka E.M., Barg E., Njeru R.W., Vetten H.J.;
RT   "Biological serological and molecular variability of Sweet potato feathery
RT   mottle potyvirus isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-1164
RA   Ateka E.M., Barg E., Njeru R.W., Vetten H.J.;
RT   ;
RL   Submitted (10-JAN-2004) to the EMBL/GenBank/DDBJ databases.
RL   Institute for Plant Virology, Microbiology and Biosafety, Federal
RL   Biological Research Center for Agriculture and Forestry, Messeweg 11/12,
RL   Braunschweig 38104, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1164
FT                   /country="Kenya"
FT                   /db_xref="taxon:12844"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /strain="C"
FT                   /isolate="45/3S"
FT   CDS             <1. .942
FT                   /codon_start=1
FT                   /db_xref="GOA:Q5GIU7"
FT                   /db_xref="UniProt/TrEMBL:Q5GIU7"
FT                   /product="polyprotein"
FT                   /protein_id="AAS99567.1"
FT                   /translation="SGNPPEFKDAGANPPAPKPKGPFTAPEITEVTEPEDPKQAALREA
FT                   RQKQPAVTPESYGRDTGEKSMRSVSPQRMKDKDVNVGTTGTFVVPRVKLHTSKMRQPRV
FT                   NGISVVNLQHLATYEPEQHNIGNTRSTQEQFRAWYEGVKGDYGVDDAGMAILLNGLMVW
FT                   CIENGTSPNINGVWTMMDGDEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRT
FT                   KAYMPRYGLQRNLTDMSLARYAFDFYELHSTTPVRAKEAHMQVKAAALKNAHNRLFGLD
FT                   GNVSTQEEDTERHTATDVTRNIHNLLGMRGVQ"
FT   mat_peptide     1. .939
FT                   /product="coat protein"
XX
SQ   Sequence 1164 BP; 352 A; 233 C; 282 G; 297 T; 0 other;

 AY523544  Length: 1164  April 19, 2005 08:49  Type: N  Check: 6045  ..

       1  tctggtaacc cccctgagtt taaagatgca ggtgcaaacc caccagcacc
      51  aaaaccaaaa gggccattta cagcaccaga aattacagag gttactgagc
     101  cggaggatcc caaacaagct gcgcttcgcg aagctagaca gaaacaacct
     151  gctgtcacac ccgaatcata cggtagagac acaggtgaga aatctatgcg
     201  ctctgtttca ccacaaagga tgaaagacaa ggatgtcaac gttggcacga
     251  caggcacgtt tgtggttcca cgagttaagc tccatactag caaaatgcgc
     301  caacctagag tcaatggaat ctctgtagta aacttacagc atctcgcaac
     351  ttatgaacct gagcaacata acattgggaa tacacgctca actcaggaac
     401  agtttcgcgc atggtatgaa ggtgttaagg gtgattatgg cgttgatgat
     451  gctgggatgg caatcttgtt aaatggattg atggtatggt gcatagagaa
     501  tggaacatct ccaaatataa atggcgtttg gacgatgatg gatggggatg
     551  aacaagtgac gtatcccata aagccattac tggatcatgc agtgcctact
     601  tttaggcaaa tcatgacaca cttcagtgac gttgctgaag cgtatataga
     651  aatgagaaat cgcaccaagg catatatgcc taggtatgga ttacaacgta
     701  acttgactga tatgagtctt gcgcgatatg catttgattt ctatgagctg
     751  cactcaacaa cacctgtgcg tgctaaagaa gcacacatgc aggtgaaagc
     801  agctgcactt aagaatgcgc ataatcggtt gtttggtttg gatggaaacg
     851  tctccacgca agaagaggat acggagaggc acactgcgac tgatgttact
     901  agaaatatac ataacctctt aggaatgagg ggtgtgcagt aggtgaaact
     951  ttgcactgta tttatttact tatgtgattt ttagtatgcc tttaccttaa
    1001  attcgtgtcc ttcagtcccg acagaaatgg ttgagtgtat tggcagagta
    1051  ggcttttagc ctggtccata cacttgagaa gtttctggtc tattacgtat
    1101  cataagggac tcttaaaggt gaggagtacc tcgtaagaaa agcctttttg
    1151  gttcgtgatc gaac