Sequence of DPV Thottapalayam virus

Thottapalayam virus S segment, complete sequence.

ACC No: AY526097

Dated: 2004-02-18 | Length: 1530 | CRC: 824901490

                
ID   AY526097; SV 1; linear; genomic RNA; STD; VRL; 1530 BP.
XX
AC   AY526097;
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DT   18-FEB-2004 (Rel. 78, Created)
DT   18-FEB-2004 (Rel. 78, Last updated, Version 1)
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DE   Thottapalayam virus S segment, complete sequence.
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KW   .
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OS   Thottapalayam virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Hantavirus.
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RN   [1]
RP   1-1530
RA   Song J.-W., Baek L.J., Schmaljohn C., Yanagihara R.;
RT   "Thottapalayam Virus: Partial Characterization of a Hantavirus Isolated
RT   from an Insectivore (Suncus murinus)";
RL   Unpublished.
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RN   [2]
RP   1-1530
RA   Schmaljohn C.S., Toney A.;
RT   ;
RL   Submitted (14-JAN-2004) to the EMBL/GenBank/DDBJ databases.
RL   Virology Division, United States Army Medical Research Institute of
RL   Infectious Diseases, 1301 Ditto Street, Ft. Detrick, MD 21702, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1530
FT                   /organism="Thottapalayam virus"
FT                   /segment="S"
FT                   /specific_host="Suncus murinus"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /virion
FT                   /db_xref="taxon:262967"
FT   CDS             68. .1375
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:Q6QTF0"
FT                   /db_xref="InterPro:IPR002214"
FT                   /db_xref="InterPro:IPR010989"
FT                   /db_xref="UniProtKB/TrEMBL:Q6QTF0"
FT                   /protein_id="AAS19458.1"
FT                   /translation="MTQGKMTPEELKKLEHEYNQTEKALTESSQKLIQEIDQAGQNPDS
FT                   IQQQSIKQRSDVVDAYRNKLKELQGMIAAGQAMLAEEAKKKRKPDVPGVEEGDYLTAKS
FT                   SLRYGNVVDLNPLSLEEPAGQTANWGKIFEYILTLTQVLLLKGLYILTTRGRQTSKDNK
FT                   GTRIKLKDDSCMEDRNGIKQHKYLYISLPTSQSSIQDDELTPGRFRTMISGLLPNEIKA
FT                   KKLMSPVMGVIGFQHLAEAWPGAMEKMLSDQCEYMTKDKANPSNSTNRVYFRTRQAQVD
FT                   ALNLPDISALRMFADQNYKIPADIESEATPWLFANAPDRCPPTVLQVAGIPELGAFLAL
FT                   MQDIRGGILASSLRGTGEEKIAKKSSFYQSYVRRTQSMGVNCDQKIIHIFMDYLGSYCV
FT                   DHFNLGDDMDPELKAKAQALLEKKVKEISSQEPIKL"
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SQ   Sequence 1530 BP; 492 A; 325 C; 322 G; 391 T; 0 other;

ay526097 Length: 1530  18-FEB-2004  Type: N  Check: 9514  ..

       1  tagtagtgga ctccctgctt acaacagaag agactactac tactatatag
      51  aaatctttca gacaaagatg actcaaggga aaatgactcc cgaagagcta
     101  aagaaattag aacatgagta caatcaaact gagaaggcat tgacagagtc
     151  atctcagaaa ctgattcaag agatagatca agctggtcaa aaccctgact
     201  ccatccaaca acagtccata aaacagagat ctgatgttgt tgatgcttac
     251  aggaacaaat tgaaagagtt gcagggcatg attgctgccg ggcaagctat
     301  gcttgctgaa gaggcaaaaa agaaaagaaa gccagatgtg ccgggggttg
     351  aagaaggtga ttatctcact gcaaagtcat cccttcggta tgggaacgtt
     401  gtcgacctca atccactcag cctagaagaa cctgcaggcc aaactgccaa
     451  ttggggaaag atattcgaat acattttgac ccttacacag gttcttctcc
     501  ttaaaggcct ctacatcttg accacccgag gaagacagac tagtaaagac
     551  aacaaaggta ctagaatcaa gcttaaggat gactcatgca tggaggaccg
     601  gaatgggata aaacaacaca agtaccttta catatccctt ccaacaagcc
     651  aatcttccat ccaagatgat gaactcacac ctggacgttt taggacaatg
     701  atctcaggac tcttgccaaa tgagataaag gcaaaaaagc tgatgagccc
     751  tgtaatgggt gtcattggtt ttcaacattt agctgaggct tggccaggtg
     801  caatggaaaa gatgttgagt gaccagtgtg aatatatgac caaggataaa
     851  gcaaacccat caaatagcac taatagggtt tatttccgaa cacgtcaggc
     901  ccaagttgat gcacttaatt tgcctgatat ctcagcactg agaatgtttg
     951  ctgaccaaaa ttataaaata ccagcagata ttgagtcaga agccacccca
    1001  tggttatttg caaatgcacc agaccgatgc cctcctactg ttcttcaagt
    1051  ggcaggtatc ccggaacttg gtgctttcct tgcactcatg caggacatac
    1101  ggggtgggat tcttgcctct agtcttcgtg gaacaggaga agagaagata
    1151  gctaagaaat catcattcta tcaatcatat gtgagaagaa cacaatcaat
    1201  gggtgttaac tgtgatcaga agatcatcca catctttatg gattacttgg
    1251  gctcatattg tgttgaccac tttaaccttg gtgatgatat ggatccagaa
    1301  ctcaaggcca aggctcaggc cctacttgag aagaaagtaa aggagatttc
    1351  aagtcaggag cctattaaac tgtaattaac cgatactctt attctgtaaa
    1401  tagtttaaac tgcttttaat gctttgcttg cttgcttact aacttgctta
    1451  ctcctaaccc cgttagcttt ccccactact aaccccaagt tatttgatct
    1501  ctaattgttg tataggggtg tctactacta