Sequence of DPV Rice gall dwarf virus

Rice gall dwarf virus segment 11 nonstructural protein mRNA, complete cds.

ACC No: AY559407

Dated: 2004-03-22 | Length: 1167 | CRC: 2114660523

                !!NA_SEQUENCE 1.0
ID   AY559407   standard; mRNA; VRL; 1167 BP.
XX
AC   AY559407;
XX
SV   AY559407.1
XX
DT   22-MAR-2004 (Rel. 79, Created)
DT   22-MAR-2004 (Rel. 79, Last updated, Version 1)
XX
DE   Rice gall dwarf virus segment 11 nonstructural protein mRNA, complete cds.
XX
KW   .
XX
OS   Rice gall dwarf virus
OC   Viruses; dsRNA viruses; Reoviridae; Phytoreovirus.
XX
RN   [1]
RP   1-1167
RA   Fan G.C., Wu Z.J., Lin Q.Y., Xie L.H.;
RT   "cDNA synthesis, molecular cloning and sequence analysis of rice gall dwarf
RT   virus of segment s11";
RL   Unpublished.
XX
RN   [2]
RP   1-1167
RA   Fan G.C., Wu Z.J., Lin Q.Y., Xie L.H.;
RT   ;
RL   Submitted (26-FEB-2004) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection, Plant Virology, Kingshan, Fuzhou, Fujian 350002, P.R.
RL   China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1167
FT                   /country="China"
FT                   /db_xref="taxon:10986"
FT                   /mol_type="mRNA"
FT                   /organism="Rice gall dwarf virus"
FT                   /isolate="Guang Dong"
FT                   /specific_host="Rice"
FT                   /segment="11"
FT   CDS             29. .1096
FT                   /codon_start=1
FT                   /product="nonstructural protein"
FT                   /protein_id="AAS66756.1"
FT                   /translation="MDADTERVIKLHVDLIKNHQIYGVLTKFDATRKLRLTADGNTNNA
FT                   SRAALSKLQELASSGEAYVVSDLASRTVETSDIVKAVIFTPHSVISRGKLIKDIIPYGV
FT                   MAAAIVYVPETITILDSIQFYGENHVSRPYSMVVLIDACKEIGTEVVGSDYDTYYYCQA
FT                   PEYGRNLLKMGTMRPNLPAIVRLSMGDLCYGAAVSSHTMAAKYLKLFNRLPNGFTPKSH
FT                   LLEIYLVLEMDQFKEIVQEMMAKGGHEYNDSKNLLSRTTMFNPDHAYTHIIFWRGWSST
FT                   YKEFLSQDQLTTFTGRPGVAGDLGVWTFSIPSMFNDGRVYIRYKFFPLHAKKREHNSGK
FT                   GISLYPDLESLKLES"
XX
SQ   Sequence 1167 BP; 350 A; 202 C; 259 G; 356 T; 0 other;

 AY559407  Length: 1167  March 30, 2004 08:52  Type: N  Check: 2558  ..

       1  ggtatttttg tcatagtgaa tccctaccat ggatgcggac actgagcgtg
      51  taatcaagct tcatgttgat ttgatcaaaa accaccagat atatggtgtg
     101  ttgacaaaat ttgatgcaac tagaaaattg cgtctcacag ctgatggaaa
     151  tacaaacaat gcatccagag ctgcattgtc taaattgcag gaattggctt
     201  catccggaga agcatatgtc gtatctgatc tcgctagccg gactgttgaa
     251  actagcgaca tcgttaaagc tgtgatattc actccccatt cagtaatatc
     301  acgtggtaaa ttaattaagg acatcatacc atatggggtg atggctgcgg
     351  cgatcgttta tgtaccagag actattacga tacttgatag tatccaattt
     401  tacggtgaaa accatgtgtc acgtccatac tcaatggtgg tattgattga
     451  tgcatgtaaa gagatcggga ctgaagtggt cgggagtgac tatgatactt
     501  actattattg tcaggctcct gaatatggta gaaatctgtt aaagatggga
     551  acgatgagac caaatcttcc tgcgatagtt aggttatcaa tgggtgattt
     601  gtgttatggt gcagccgttt cttctcatac catggccgcc aaatatttga
     651  aattattcaa ccgtttaccc aacggtttta cgcctaaatc acatttgctt
     701  gagatctatt tagtcttaga aatggatcaa tttaaagaaa ttgttcaaga
     751  gatgatggct aaaggtggcc atgaatataa tgattctaag aatttattgt
     801  caagaacgac aatgtttaat cccgatcatg cttatacgca tatcattttt
     851  tggaggggat ggagttctac atataaggaa tttctatcac aagatcagtt
     901  aactacgttc actggtaggc ctggagtagc cggtgatcta ggagtatgga
     951  cattttcaat tccatcaatg tttaatgatg gtagagtata tatcaggtac
    1001  aagttctttc ctctgcatgc aaagaaaaga gagcataatt ccgggaaagg
    1051  tatatcactt tatccggatt tagaatcatt gaagcttgaa agctagttgt
    1101  cggtttacgc atgtggatag gggctgtggc caaccacgca gttaatcacc
    1151  tttggtcaaa aaatgat