Sequence of DPV Plum pox virus
Plum pox virus isolate Abricotier Turquie polyprotein gene, partial cds.
ACC No: AY677114
Dated: 2005-04-16 | Length: 3706 | CRC: 1530478222
!!NA_SEQUENCE 1.0
ID AY677114 standard; genomic RNA; VRL; 3706 BP.
XX
AC AY677114;
XX
SV AY677114.1
XX
DT 14-FEB-2005 (Rel. 82, Created)
DT 16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE Plum pox virus isolate Abricotier Turquie polyprotein gene, partial cds.
XX
KW .
XX
OS Plum pox virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-3706
RX DOI; 10.1016/j.virusres.2004.09.009.
RX PUBMED; 15681071.
RA Glasa M., Candresse T.;
RT "Partial sequence analysis of an atypical Turkish isolate provides further
RT information on the evolutionary history of Plum pox virus (PPV)";
RL Virus Res. 108(1-2):199-206(2005).
XX
RN [2]
RP 1-3706
RA Glasa M., Candresse T.;
RT ;
RL Submitted (05-JUL-2004) to the EMBL/GenBank/DDBJ databases.
RL Plant Virology, Institute of Virology, Dubravska cesta 9, Bratislava 84505,
RL Slovakia
XX
FH Key Location/Qualifiers
FH
FT source 1. .3706
FT /country="Turkey"
FT /db_xref="taxon:12211"
FT /mol_type="genomic RNA"
FT /organism="Plum pox virus"
FT /isolate="Abricotier Turquie"
FT /specific_host="Prunus armeniaca"
FT CDS 147. .>3706
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:Q5EWX8"
FT /note="contains P1, HC, P3 and 6K1 proteins"
FT /product="polyprotein"
FT /protein_id="AAW24482.1"
FT /translation="MSTIVFGSFTCHLDAAIHQDNADRLAKAWTRPENRQVSNVHLLCR
FT RAAKSLINTYESATASAWKGLEEKLQPMFAKREFSKTVTKRKGLRCFKESSEKFIEKKL
FT RKQYQEERERFQFLNGPDAIVNQISVGKSEASVWVPFPHIIEKPSFATPSMKKKVVFTK
FT VRMSEASLQLFMRRVAANAKANGQKVEIIGRKRVVGNYTTKSRLTYFRTHVRHLDGSKP
FT RYDLVLDEATKRILQLFANTSGFHHVHKKGEITPGMSGFVVNPMNLSDPMQVYDTDLFI
FT VRGKHNSILVDSRCKVSKEQSSEIVHYSDPGKQFWDGFTNSFMQCKLRETDHQCTSDLD
FT VKECGYVAALVCQAIIPCGKITCLQCAQKYSYMSQQEIRDRFSTVIEQHEKTVMDNYPQ
FT FSHVLAFLKRYRELMRVENQNYEAFKDITHMIGERKEAPFSHLNKINELIIKGGMMSAQ
FT DYIEASDHLRELARYQKNRTDNIRCGSMKAFRNKISSKAHVNMQLMCDNQLDVNGNFVW
FT GQREYHAKRFFRNYFDVIDVSDGYRRHIIRENPRGIRKLAIGNLVMSTNLAALRKQLLG
FT EACTHFEVSKECTSKRGENFVYQCCCVTHEDGTPLESEILSPTKNHLVVGNSGDSKYVD
FT LPAAKGNEMYIAKAGYCYINIFLAMLINVNEDEAKSFTKTVRDTLVPKLGTWPSMMDLA
FT TACHFLAVLYPETRNAELPRILVDHEAKIFHVVDSFGSLSTGMHVLKANTINQLISFAS
FT DTLDSSMKTYLVGGLEVDKCDEFKNVKLLIRSIYKPQVMEQVLKEEPYLLLMSVLSPGV
FT LMALFNSGSLEKATQYWITRSHSLAAITSMLSALAAKVSLASTLNAQMSVIDEHAAVLC
FT DSVFDGTKPYASYMMAVKTLERMKARTESDHTLNDLGFSVLRQATPHLVEKSYLQELEQ
FT AWKEISWSERFSAILESQRWRKHIPKPFIPKDAADLGGRYDISVRSLLGSQYKRLKDVI
FT RRKRDDVVCYTHQSMGKLFCKAIGISTSFLPSTLKMFDMLIIFGLLLSIGATCNSMINE
FT HKHLKQVAADREDKKRFKRLQVLHTRLSERVGCTPTANEFLEYVQGENPDLLKHAEDLI
FT GDGQVVVHQSKRDSQANLERVVAFVALVMMLFDSERSDGVYKILNKLKGVMGSIDQTVH
FT HQSLDDIEDMLDEKKLTVDFV"
XX
SQ Sequence 3706 BP; 1187 A; 732 C; 835 G; 952 T; 0 other;
AY677114 Length: 3706 April 19, 2005 08:49 Type: N Check: 1082 ..
1 aaaatataaa aactcaacac aacatacaaa attttatgcg atcaaatcaa
51 tctcaagcta tcaaaatttt ccaaatctca cttaaaagat caaaaatcaa
101 caaagaacat tcctcaattt ttctaccaaa ttcactgcaa gtcaagatgt
151 caaccattgt atttggctca tttacttgcc acctcgatgc agctatccac
201 caggataatg cagacagatt ggcaaaggcc tggacccgtc cagagaaccg
251 ccaagtcagt aacgtgcatc tactgtgccg aagagcggca aaaagtctca
301 taaatacata tgagagtgca acagctagtg cttggaaagg gctagaggaa
351 aagttgcaac ctatgtttgc taagcgagag tttagcaaaa cagtcacaaa
401 gagaaaaggg cttcggtgct tcaaagaaag ctctgagaag tttattgaaa
451 agaagctcag gaaacagtat caagaggagc gtgagagatt ccaatttctc
501 aacggtccag atgcaatagt caaccaaatc agtgttggca aaagtgaagc
551 ttcagtatgg gtgccattcc ctcatattat tgagaaacct agctttgcaa
601 caccatcaat gaaaaagaag gtggtgttta ccaaggttag gatgtccgag
651 gcatcactac aacttttcat gaggagggtt gctgcaaacg ccaaggcaaa
701 tggtcaaaaa gttgagatca tagggcgtaa gcgtgtagtt ggtaactaca
751 caacgaaaag tcgtctgaca tactttcgca cccatgttcg gcacttggat
801 ggttcaaaac cacgctatga ccttgtgttg gacgaggcaa ccaagaggat
851 tctgcaactg tttgcaaaca caagtggctt ccaccatgtc cacaagaaag
901 gggaaataac accaggaatg agcggatttg tggtaaatcc catgaatcta
951 tcggacccaa tgcaagtgta tgacacggat ctttttatag ttcgtggaaa
1001 acacaactcc attcttgttg actcacggtg taaggtttcc aaagagcaaa
1051 gcagtgagat agtccactac tccgacccag gcaaacaatt ttgggatggt
1101 ttcaccaatt catttatgca gtgcaagcta cgcgaaactg atcatcagtg
1151 tacatctgac ctggacgtga aggagtgtgg ttatgttgca gcacttgtgt
1201 gccaagcgat aatcccttgt ggaaaaatca catgtttgca atgtgctcaa
1251 aagtactctt acatgtcaca gcaggaaata cgtgatagat tttcgacagt
1301 gattgagcaa catgagaaaa cggtgatgga taactatcca caattttcgc
1351 atgttctcgc ttttctaaag aggtatcgtg aattgatgcg cgtggaaaat
1401 cagaattatg aagctttcaa agatatcacg cacatgatag gcgagcgcaa
1451 agaagcacct ttttcccatc tcaataagat caatgaatta atcattaagg
1501 gtggtatgat gagcgcacaa gactacatag aagcctcaga tcatctgcgc
1551 gaactagcgc gatatcaaaa gaatcgtacg gataatattc gatgtgggtc
1601 tatgaaagct ttcagaaaca agatatcatc gaaagcacat gtcaacatgc
1651 aactcatgtg tgacaatcaa cttgatgtca acggcaactt cgtctggggt
1701 cagagggaat accatgcaaa acgattcttc aggaattact ttgacgtgat
1751 tgatgttagc gatggctaca gacgtcacat tattcgcgag aaccctagag
1801 gcattcgcaa attggccatt ggcaatcttg tcatgtcaac aaatcttgct
1851 gcactgcgca agcaattact tggagaggcg tgcactcact ttgaagtttc
1901 gaaagagtgt acgagcaagc gaggggaaaa ttttgtgtat caatgttgct
1951 gcgttactca tgaagacgga acaccgttag aatcagagat actaagtcca
2001 acgaagaacc atttagttgt tggcaactca ggtgattcaa agtacgtgga
2051 tttacctgct gcgaaaggaa atgagatgta catagcaaag gctggttact
2101 gttacattaa catttttctt gctatgttga tcaatgtgaa tgaagatgag
2151 gcaaagagtt tcacaaaaac agtgcgcgat actcttgtac ccaaacttgg
2201 aacgtggcca tcaatgatgg atttggctac agcatgccat tttcttgcag
2251 ttctctaccc agaaactcga aatgctgaat taccacggat acttgttgat
2301 cacgaggcaa agatattcca tgtggtcgat tcatttgggt cattatcaac
2351 tggtatgcat gtccttaagg caaacacaat caatcaactt atcagctttg
2401 ctagtgatac attggattca agcatgaaga catatctagt tgggggtctc
2451 gaagtagata agtgtgacga attcaagaac gtcaaactct taattagaag
2501 catctataaa ccacaagtga tggagcaagt gctcaaggag gaaccatatt
2551 tattgcttat gagtgttttg tcacctggcg tcttgatggc attattcaat
2601 agcggttcgc tggaaaaagc tacacaatat tggataacac gctctcatag
2651 tttggcagca atcacatcaa tgctttcggc acttgcagcc aaagtttcac
2701 ttgcaagcac attgaatgca caaatgagtg ttattgacga acatgcagca
2751 gttctgtgtg acagtgtctt tgatggaacc aagccatatg catcctacat
2801 gatggcagtg aagactttag aaagaatgaa ggcacgaacc gaatctgatc
2851 acaccctgaa tgatttaggg ttttcagtac tcagacaggc aacaccacat
2901 ctggttgaaa aaagttatct ccaggagttg gagcaggctt ggaaagagat
2951 aagttggtcg gaaagattct ctgcaatctt ggaatcgcag cggtggcgaa
3001 aacatatacc aaagcccttc atcccgaaag acgcagcaga tttaggaggc
3051 aggtacgaca tctccgttcg gtcattactt ggcagtcaat acaaacgcct
3101 gaaagacgtg attcggcgga aaagagacga cgtcgtttgt tacacacacc
3151 agtcgatggg aaagctattc tgcaaagcta tcggaatttc cacaagtttt
3201 cttccaagca ctctgaagat gtttgacatg ctcatcatat ttggtctctt
3251 gctttcaata ggagccacat gcaattcaat gattaatgaa cacaaacatt
3301 taaagcaagt tgctgctgat cgtgaagata agaaaagatt caagagattg
3351 caggttttgc acacgagact atcagaaagg gttggttgca caccaacagc
3401 gaatgaattc ctagaatatg tgcaaggtga aaaccctgat ctattgaaac
3451 atgcagagga cttgatcgga gatgggcagg ttgttgtgca tcaaagtaaa
3501 agagattcac aagctaatct ggaacgagtc gtagcatttg tagcccttgt
3551 tatgatgctt tttgactcgg agcggagtga tggtgtttac aaaatcctca
3601 ataagcttaa gggcgtcatg ggaagtatcg atcagactgt tcatcatcaa
3651 agtttggacg acattgaaga catgttagac gaaaagaagt tgacagtcga
3701 ttttgt