Sequence of DPV Plum pox virus
Plum pox virus isolate Abricotier Turquie polyprotein gene, partial cds.
ACC No: AY677115
Dated: 2005-04-16 | Length: 1449 | CRC: 1450236648
!!NA_SEQUENCE 1.0
ID AY677115 standard; genomic RNA; VRL; 1449 BP.
XX
AC AY677115;
XX
SV AY677115.1
XX
DT 14-FEB-2005 (Rel. 82, Created)
DT 16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE Plum pox virus isolate Abricotier Turquie polyprotein gene, partial cds.
XX
KW .
XX
OS Plum pox virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1449
RX DOI; 10.1016/j.virusres.2004.09.009.
RX PUBMED; 15681071.
RA Glasa M., Candresse T.;
RT "Partial sequence analysis of an atypical Turkish isolate provides further
RT information on the evolutionary history of Plum pox virus (PPV)";
RL Virus Res. 108(1-2):199-206(2005).
XX
RN [2]
RP 1-1449
RA Glasa M., Candresse T.;
RT ;
RL Submitted (05-JUL-2004) to the EMBL/GenBank/DDBJ databases.
RL Plant Virology, Institute of Virology, Dubravska cesta 9, Bratislava 84505,
RL Slovakia
XX
FH Key Location/Qualifiers
FH
FT source 1. .1449
FT /country="Turkey"
FT /db_xref="taxon:12211"
FT /mol_type="genomic RNA"
FT /organism="Plum pox virus"
FT /isolate="Abricotier Turquie"
FT /specific_host="Prunus armeniaca"
FT CDS <1. .1232
FT /codon_start=3
FT /db_xref="UniProt/TrEMBL:Q5EWX7"
FT /note="contains NIb protein and capsid"
FT /product="polyprotein"
FT /protein_id="AAW24483.1"
FT /translation="EAWGYKELLREIRKFYSWVLEQAPYNALSKDGKAPYIAETALKKL
FT YTDSEASETEIERYLEAFYNDIDDSLDSNIVVHQADEKEDDEEVGAGKPIVVTAPAATV
FT ATTQPAPLIQPAPQTTAPTFNPIFTPATTQPATKPISSISGATSQSFGVYGNEDASPST
FT SNTLVNTGRDRDVDAGSIGTFAVPRLKTITSKLSLPKVKGKAIMNLNHLAHYSPAQVDL
FT SNTRAPQSCFQTWYEGVKRDYDVTDEEMSIILNGLMVWCIENGTSPNINGMWVMMDGET
FT QVEYPIKPLLDHAKPTFRQIMAHFSNVAEAYIEKRNYEKAYMPRYGIQRNLTDYSLARY
FT AFDFYEMTSTTPVRAREAHIQMKAAALRNVQNRLFGLDGNVGTQEEDTERHTAGDVNRN
FT MHNLLGVRGV"
XX
SQ Sequence 1449 BP; 439 A; 309 C; 339 G; 362 T; 0 other;
AY677115 Length: 1449 April 19, 2005 08:49 Type: N Check: 7076 ..
1 tggaagcgtg gggttataag gagttgctga gagaaattcg aaaattttac
51 agttgggttc ttgagcaggc accatacaat gctctttcaa aagacgggaa
101 agccccgtat atagcagaga cggcacttaa gaaactctat actgattctg
151 aagcatctga gactgaaatt gagagatatc tcgaagcatt ttacaatgat
201 attgatgata gccttgactc caacattgtt gtacaccagg ctgacgaaaa
251 ggaggacgat gaagaagttg gcgcaggaaa gcctattgtg gtaactgcac
301 cggcagcaac tgtggcaaca actcaaccag ctccattgat acaacctgca
351 cctcaaacca cagcaccaac gttcaacccc attttcactc cagcaacaac
401 tcagcctgcg acaaaaccaa tttcttcaat ttcaggggcc acatcgcagt
451 cttttggagt ttatggaaat gaggatgcat cacctagcac ctcaaacact
501 ttggtgaaca caggaaggga tagggacgtc gacgcaggat cgattggaac
551 tttcgcagtg ccacgcttaa aaacaataac gtcgaagtta tctctaccaa
601 aggtgaaagg aaaagcaatt atgaacttaa atcatttggc acattacagt
651 cctgcacaag ttgacttgtc aaacacacga gctccacaat cttgtttcca
701 gacttggtat gaaggagtta agcgtgatta cgacgtcaca gatgaggaaa
751 tgagcatcat tttgaatggc ctgatggttt ggtgcatcga aaacggaacg
801 tctccgaaca tcaacggaat gtgggtgatg atggatgggg aaacacaagt
851 ggagtatcca ataaagccat tgctggatca cgcgaaaccc acttttagac
901 aaattatggc acatttcagt aacgtggctg aagcgtatat tgaaaaacgg
951 aattacgaga aagcatacat gccaaggtat ggaattcagc gcaacctgac
1001 agattacagc ctcgccagat acgcctttga tttttacgaa atgacttcaa
1051 caacgcctgt gcgtgcacgt gaagctcata tacagatgaa ggcagcagca
1101 ttgagaaatg ttcagaatcg tttatttggc ttggatggaa acgtcggaac
1151 acaagaagag gacacagaga gacacaccgc tggtgatgtg aatcgcaaca
1201 tgcacaacct cctcggtgtg aggggagtgt agtggtctcg gtatctatca
1251 taaactctac ttgggtgaga gtctagtcac ccaattgttt ttagattcct
1301 gttagcatcc ttttctccgc tttaattgcg gcacattcag tgaggttgca
1351 cctccatatg tgttagtctt ttattgtcga acacaggccc ttgtatctga
1401 tgtagcgagt gtttcactcc attcaggtta tagttcttgt gcaagaggc