Sequence of DPV Papaya ringspot virus

Papaya ringspot virus coat protein gene, partial cds.

ACC No: AY687386

Dated: 2004-10-10 | Length: 858 | CRC: -613059804

                !!NA_SEQUENCE 1.0
ID   AY687386   standard; genomic RNA; VRL; 858 BP.
XX
AC   AY687386;
XX
SV   AY687386.1
XX
DT   10-OCT-2004 (Rel. 81, Created)
DT   10-OCT-2004 (Rel. 81, Last updated, Version 1)
XX
DE   Papaya ringspot virus coat protein gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-858
RA   Sharma J., Jain R.K., Ramiah M., Varma A.;
RT   "Natural spread of PRSV in different geographical regions of India";
RL   Unpublished.
XX
RN   [2]
RP   1-858
RA   Jain R.K., Sharma J., Ramiah M., Varma A.;
RT   ;
RL   Submitted (16-JUL-2004) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, IARI, New Delhi, Delhi 110012, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .858
FT                   /country="India:Tamil Nadu"
FT                   /db_xref="taxon:12205"
FT                   /mol_type="genomic RNA"
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="Coimbatore"
FT   CDS             <1. .>858
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AAU93506.1"
FT                   /translation="SKNEAVDAGLNDKLKEKEKERDKEREKEKKDKKDASDGGYVSTST
FT                   KTGERDRDVNAGTSGTFTVPRIKSFTDKMILPRIKGKAVLNLNHLLQYNPQQIDISNTR
FT                   ATQSQFEKWYEGVRNDYVLSDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDY
FT                   PIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDF
FT                   YEVNSKTPDRAREAHMQMKAAALRNTNRRMFGMDGSVSNKEENTERHTVEDVNRDMHSL
FT                   LGMRN"
XX
SQ   Sequence 858 BP; 299 A; 148 C; 212 G; 199 T; 0 other;

AY687386  Length: 858  October 12, 2004 08:59  Type: N  Check: 8727  ..

       1  tccaagaatg aagctgtgga tgctggtctc aatgataagc tgaaggagaa
      51  agaaaaagaa agagataaag agagagaaaa agaaaagaaa gacaagaagg
     101  atgctagtga cggaggttat gtgtcaacta gcacaaaaac tggagagaga
     151  gatagagatg tcaatgctgg gactagtggt acattcacag ttccaagaat
     201  caagtcattt actgataaaa tgattttgcc cagaattaag gggaaagctg
     251  tccttaattt gaatcatctt cttcagtata atccacagca aattgacatc
     301  tcaaacactc gtgccacaca atcacagttt gagaagtggt atgagggagt
     351  gaggaatgac tatgtcctta gtgataatga aatgcaagtg atgttaaatg
     401  gcttaatggt ttggtgtatc gaaaatggta catctccaga catatctggt
     451  gtctgggtca tgatggatgg tgagactcag gtcgattacc caattaaacc
     501  attaattgaa catgcaactc cttcatttag gcaaatcatg gctcacttca
     551  gtaacgcggc agaagcatat atcgcgaagc gaaatgcaac tgagagatac
     601  atgccgcggt atggaatcaa gagaaatttg actgacatta gcctcgctag
     651  atatgctttc gatttctatg aggtgaactc aaaaacacct gatagagctc
     701  gagaggctca tatgcagatg aaggcagctg cactgcggaa cacaaatcgc
     751  agaatgtttg gaatggacgg cagtgtcagt aacaaggaag aaaacacgga
     801  gagacacaca gtggaagatg tcaatagaga catgcactct ctcctgggta
     851  tgcgcaac