Sequence of DPV Potato virus Y
Potato virus Y isolate Vic6 P1 protein (P1) gene, partial cds.
ACC No: AY700016
Dated: 2009-06-03 | Length: 1013 | CRC: -1561716555
ID AY700016; SV 1; linear; genomic RNA; STD; VRL; 1013 BP.
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AC AY700016;
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DT 30-AUG-2004 (Rel. 81, Created)
DT 03-JUN-2009 (Rel. 101, Last updated, Version 2)
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DE Potato virus Y isolate Vic6 P1 protein (P1) gene, partial cds.
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KW .
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OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RC Publication Status: Online-Only
RP 1-1013
RX PUBMED; 19419565.
RA Ramirez-Rodriguez V.R., Frias-Trevino G., Avina-Padilla K.,
RA Silva-Rosales L., Martinez-Soriano J.P.;
RT "Presence of necrotic strains of Potato virus Y in Mexican potatoes";
RL Virol. J. 6(1):48-48(2009).
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RN [2]
RP 1-1013
RA Ramirez-Rodriguez V., Ochoa-Sanchez J.C., Frias-Trevino G.,
RA Flores-Olivas A., Silva-Rosales L., Gonzalez de la Vara L.,
RA Rivera-Bustamante R., Martinez-Soriano J.P.;
RT "Biological and sequence diversity of Potato virus Y (PVY) affecting
RT potatoes in Mexico";
RL Unpublished.
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RN [3]
RP 1-1013
RA Ramirez-Rodriguez V., Ochoa-Sanchez J.C., Frias-Trevino G.,
RA Flores-Olivas A., Silva-Rosales L., Gonzalez de la Vara L.,
RA Rivera-Bustamante R., Martinez-Soriano J.P.;
RT ;
RL Submitted (28-JUL-2004) to the EMBL/GenBank/DDBJ databases.
RL Biotecnologia y Bioquimica, Centro de Invetigacion y Estudios Avanzados,
RL Km. 9.6 Lib. norte Carr. Irapuato-Leon, Irapuato, Guanajuato 36500, Mexico
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FH Key Location/Qualifiers
FH
FT source 1. .1013
FT /organism="Potato virus Y"
FT /host="Potato"
FT /strain="N; necrotic"
FT /isolate="Vic6; Villa Victoria 6"
FT /mol_type="genomic RNA"
FT /country="Mexico:Edo. de Mexico"
FT /note="field isolate collected in 2000 and preserved in
FT greenhouse of the Direccion General de Sanidad Vegetal,
FT SAGARPA"
FT /db_xref="taxon:12216"
FT gene 1. .>1013
FT /gene="P1"
FT 5'UTR 1. .188
FT /gene="P1"
FT CDS 189. .>1013
FT /codon_start=1
FT /gene="P1"
FT /product="P1 protein"
FT /db_xref="GOA:Q66WS9"
FT /db_xref="InterPro:IPR002540"
FT /db_xref="UniProtKB/TrEMBL:Q66WS9"
FT /protein_id="AAU05776.1"
FT /translation="MATYTSTIQFGSIECKLPYSPAPFGLVAGKREVLTTTDPFASLEM
FT QLSARLRRQEFATIRTSKNGTCMYRYKTDVQIARIQKKREEREREEYNFQMAASSVVSK
FT ITIAGGEPPSKLESQVRRGVIHTTPRMRTAKTYHTPKLTEGQMNHLIKQVKQIMSTKGV
FT SVQLISKKSTHVHYKEVLGSHRAVVCTAHMRGLRKRVDFRCDKWTVVRLQHLARTDKWT
FT NQVRATDLRKGDSGVILSNTNLKGNFGRSSEGLFIVRGSHEGKIYDARSKVTQ"
XX
SQ Sequence 1013 BP; 334 A; 209 C; 220 G; 250 T; 0 other;
ay700016 Length: 1013 03-JUN-2009 Type: N Check: 8627 ..
1 aattaaaaca actcaataca acataagaaa atcaacgcaa aaacactcac
51 aaaagctttc aactctaatt caaacaattt gttaagtttc agtttcgatc
101 ttcatcaaac aaactctttc aatttcagtg taagctatcg taattcagta
151 agttatttca aactctcgta aattgcagaa gatcatccat ggcaacttac
201 acatcaacaa tccagtttgg ttccattgaa tgtaaacttc catactcacc
251 cgctcctttt gggctagttg cggggaaacg agaagtttta accaccactg
301 accccttcgc aagtttggag atgcagctta gtgcgcgatt acgaaggcaa
351 gagtttgcaa ctattcgaac atccaagaat ggtacttgca tgtatcgata
401 caagactgat gtccagattg cgcgcattca aaagaagcgc gaggaaagag
451 aaagagagga atataatttc caaatggctg cgtcaagtgt tgtgtcgaag
501 atcactattg ctggtggaga gccaccttca aaacttgaat cacaagtgcg
551 gaggggtgtc atccacacaa ctccaaggat gcgcacagca aaaacatatc
601 acacgccaaa gttgacagag ggacaaatga accaccttat caagcaggtg
651 aagcaaatta tgtcaaccaa aggagtgtct gttcaactga ttagcaagaa
701 aagtactcat gttcactata aagaagtttt gggatcacat cgcgcagttg
751 tttgcactgc acatatgaga ggtttacgaa agagagtgga ctttcggtgt
801 gataaatgga ccgttgtgcg tctacagcat ctcgccagga cggacaagtg
851 gacgaaccaa gttcgtgcta ctgatctacg caagggcgat agtggagtta
901 tattgagtaa tactaatctc aaaggaaact ttgggagaag ctcggagggc
951 ctattcatag tgcgtgggtc gcacgaagga aaaatctatg atgcacgttc
1001 caaggttact caa