Sequence of DPV Potato virus Y
Potato virus Y isolate Pic3 P1 protein (P1) gene, partial cds.
ACC No: AY700018
Dated: 2009-06-03 | Length: 1009 | CRC: -1311410158
ID AY700018; SV 1; linear; genomic RNA; STD; VRL; 1009 BP.
XX
AC AY700018;
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DT 30-AUG-2004 (Rel. 81, Created)
DT 03-JUN-2009 (Rel. 101, Last updated, Version 2)
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DE Potato virus Y isolate Pic3 P1 protein (P1) gene, partial cds.
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KW .
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OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RC Publication Status: Online-Only
RP 1-1009
RX PUBMED; 19419565.
RA Ramirez-Rodriguez V.R., Frias-Trevino G., Avina-Padilla K.,
RA Silva-Rosales L., Martinez-Soriano J.P.;
RT "Presence of necrotic strains of Potato virus Y in Mexican potatoes";
RL Virol. J. 6(1):48-48(2009).
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RN [2]
RP 1-1009
RA Ramirez-Rodriguez V., Ochoa-Sanchez J.C., Frias-Trevino G.,
RA Flores-Olivas A., Silva-Rosales L., Gonzalez de la Vara L.,
RA Rivera-Bustamante R., Martinez-Soriano J.P.;
RT "Biological and sequence diversity of Potato virus Y (PVY) affecting
RT potatoes in Mexico";
RL Unpublished.
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RN [3]
RP 1-1009
RA Ramirez-Rodriguez V., Ochoa-Sanchez J.C., Frias-Trevino G.,
RA Flores-Olivas A., Silva-Rosales L., Gonzalez de la Vara L.,
RA Rivera-Bustamante R., Martinez-Soriano J.P.;
RT ;
RL Submitted (28-JUL-2004) to the EMBL/GenBank/DDBJ databases.
RL Biotecnologia y Bioquimica, Centro de Invetigacion y Estudios Avanzados,
RL Km. 9.6 Lib. norte Carr. Irapuato-Leon, Irapuato, Guanajuato 36500, Mexico
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FH Key Location/Qualifiers
FH
FT source 1. .1009
FT /organism="Potato virus Y"
FT /host="Potato"
FT /strain="O; ordinary"
FT /isolate="Pic3; Pictipapa 3"
FT /mol_type="genomic RNA"
FT /country="Mexico:Edo. de Mexico"
FT /note="field isolate collected in 2000 and preserved in
FT greenhouse of the Direccion General de Sanidad Vegetal,
FT SAGARPA"
FT /db_xref="taxon:12216"
FT gene 1. .>1009
FT /gene="P1"
FT 5'UTR 1. .184
FT /gene="P1"
FT CDS 185. .>1009
FT /codon_start=1
FT /gene="P1"
FT /product="P1 protein"
FT /db_xref="GOA:Q66WS6"
FT /db_xref="InterPro:IPR002540"
FT /db_xref="UniProtKB/TrEMBL:Q66WS6"
FT /protein_id="AAU05778.1"
FT /translation="MATYMSTICFGSFECKLPYSPASCGHIVKEREVLASVDPFADLET
FT QLSARLLKQEYATVRVLKNGTLTYRYKTDAQITRIQKKLERKDREEYHFQMAAPSIVSK
FT ITIAGGEPPSKLESQVRRGVIHTTPRMRTAKTYHTPKLTEGQMNHLIKQVKQIMSTKGG
FT SVQLVSKKSTHVHYKEVLGSHRAVVCTAHMRGLRKRVDFRCDKWTVVRLQHLARTDKWN
FT NQVRAIDLRKGDSGVILSNTNLKGNFGRSSEGLFIVRGSHEGKIYDARSKVTQ"
XX
SQ Sequence 1009 BP; 327 A; 217 C; 216 G; 249 T; 0 other;
ay700018 Length: 1009 03-JUN-2009 Type: N Check: 4137 ..
1 aattaaaaca actcaataca acataagaaa aacaacgcaa aaacactcat
51 aaacgcttat tctcactcaa gcaacttgct aagtttcagt ttaaatcatt
101 tccttgcaat tctcttaaac gatattggaa accatttcaa ctcaacaagt
151 aatttcatca cttccaacca attttagatc ctcaatggca acttacatgt
201 caacaatctg tttcggttcg tttgaatgca agctaccata ctcacccgcc
251 tcttgcgggc atattgtgaa ggaacgagaa gtgctggctt ccgttgatcc
301 tttcgcagat ctggaaacac aacttagtgc acgattgctc aagcaagaat
351 atgctactgt tcgtgtgctc aagaacggta ctcttacgta ccgatacaag
401 actgatgccc agataacgcg catccagaag aaactggaaa ggaaggatag
451 ggaagaatat cacttccaga tggcagctcc tagtattgtg tcaaagatca
501 ctattgctgg tggagagcca ccttcaaaac ttgaatcaca agtgcggagg
551 ggtgtcatcc acacaactcc aaggatgcgc acagcaaaaa catatcacac
601 gccaaagttg acagagggac aaatgaacca ccttatcaag caggtgaagc
651 aaattatgtc aaccaaagga gggtctgttc aactggttag taagaaaagt
701 acccatgttc actataagga agttttggga tcacatcgcg cagttgtttg
751 cactgcacat atgagaggtt tacgaaagag agtggacttt cggtgtgata
801 aatggaccgt tgtgcgtcta cagcatctcg ccaggacgga caagtggaat
851 aaccaagttc gtgctattga tctacgcaag ggcgatagtg gagttatatt
901 gagtaatact aatctcaaag gaaactttgg tagaagctcg gagggcctat
951 tcatagtgcg tgggtcgcac gaaggaaaaa tctatgatgc acgttccaag
1001 gttactcaa