Sequence of DPV Potato virus Y
Potato virus Y isolate Vic20 P1 protein (P1) gene, partial cds.
ACC No: AY700020
Dated: 2009-06-03 | Length: 1009 | CRC: 119233075
ID AY700020; SV 1; linear; genomic RNA; STD; VRL; 1009 BP.
XX
AC AY700020;
XX
DT 30-AUG-2004 (Rel. 81, Created)
DT 03-JUN-2009 (Rel. 101, Last updated, Version 2)
XX
DE Potato virus Y isolate Vic20 P1 protein (P1) gene, partial cds.
XX
KW .
XX
OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RC Publication Status: Online-Only
RP 1-1009
RX PUBMED; 19419565.
RA Ramirez-Rodriguez V.R., Frias-Trevino G., Avina-Padilla K.,
RA Silva-Rosales L., Martinez-Soriano J.P.;
RT "Presence of necrotic strains of Potato virus Y in Mexican potatoes";
RL Virol. J. 6(1):48-48(2009).
XX
RN [2]
RP 1-1009
RA Ramirez-Rodriguez V., Ochoa-Sanchez J.C., Frias-Trevino G.,
RA Flores-Olivas A., Silva-Rosales L., Gonzalez de la Vara L.,
RA Rivera-Bustamante R., Martinez-Soriano J.P.;
RT "Biological and sequence diversity of Potato virus Y (PVY) affecting
RT potatoes in Mexico";
RL Unpublished.
XX
RN [3]
RP 1-1009
RA Ramirez-Rodriguez V., Ochoa-Sanchez J.C., Frias-Trevino G.,
RA Flores-Olivas A., Silva-Rosales L., Gonzalez de la Vara L.,
RA Rivera-Bustamante R., Martinez-Soriano J.P.;
RT ;
RL Submitted (28-JUL-2004) to the EMBL/GenBank/DDBJ databases.
RL Biotecnologia y Bioquimica, Centro de Invetigacion y Estudios Avanzados,
RL Km. 9.6 Lib. norte Carr. Irapuato-Leon, Irapuato, Guanajuato 36500, Mexico
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FH Key Location/Qualifiers
FH
FT source 1. .1009
FT /organism="Potato virus Y"
FT /host="Potato"
FT /strain="O; ordinary"
FT /isolate="Vic20; Villa Victoria 20"
FT /mol_type="genomic RNA"
FT /country="Mexico:Edo. de Mexico"
FT /note="field isolate collected in 2000 and preserved in
FT greenhouse of the Direccion General de Sanidad Vegetal,
FT SAGARPA"
FT /db_xref="taxon:12216"
FT gene 1. .>1009
FT /gene="P1"
FT 5'UTR 1. .184
FT /gene="P1"
FT CDS 185. .>1009
FT /codon_start=1
FT /gene="P1"
FT /product="P1 protein"
FT /db_xref="GOA:Q66WS3"
FT /db_xref="InterPro:IPR002540"
FT /db_xref="UniProtKB/TrEMBL:Q66WS3"
FT /protein_id="AAU05780.1"
FT /translation="MATYMSTICFGSFECKLPYSPASCGHIVKEREVLASVDPFADLET
FT QLSARLLKQEYATVRVLKNGTLTYRYKTDAQIKRIQKKLERKDREEYHFQMAAPSIVSK
FT ITIAGGEPPSKLESQVRRGFIHTTPRMRTAKTYHTPKLTEGQMNHLIKQVKQIMSSKGG
FT SVQLISRKSTHVHYKEVLGTHRAVVCTAHMRGLRKRVDFRCDTWTVVRLQHLARTDKWS
FT NQVRAIDLRKGDSGVILSNRSLKGNFGRSSEGLFIVRGSHEGKIYDARSKVTQ"
XX
SQ Sequence 1009 BP; 324 A; 219 C; 220 G; 246 T; 0 other;
ay700020 Length: 1009 03-JUN-2009 Type: N Check: 3512 ..
1 aattaaaaca actcaataca acataagaaa aacagcgcag aaacactcat
51 aaacgcttat tctcactcaa gcatcttgct aagtttcagt ttaaatcatt
101 tcttcgcatt tctcttaaac aatattggaa accatttcaa ctcaacaagc
151 aatttcatca cttccaacca atttaaaatc ctcaatggca acttacatgt
201 caacaatctg tttcggttcg tttgaatgca agctaccata ctcacccgcc
251 tcttgcgggc atattgtgaa ggaacgagaa gtgctggctt ccgttgatcc
301 tttcgcagat ctggaaacac aacttagtgc acgactgctc aagcaagaat
351 atgctactgt tcgtgtgctc aagaacggta ctcttacgta ccgatacaag
401 actgatgccc agataaagcg catccagaag aaactggaaa ggaaggatag
451 ggaagaatat cacttccaga tggcagctcc tagtattgtg tcaaagatca
501 ctatagctgg tggagagcca ccttcaaaac ttgaatcaca agtgcggagg
551 ggtttcatcc acacaactcc aaggatgcgc acagcgaaaa catatcacac
601 gccaaagttg acagagggtc aaatgaacca ccttatcaag caggtgaagc
651 aaattatgtc aagcaaagga gggtctgttc aactgattag taggaaaagt
701 acccatgttc actataagga agttctggga acacatcgcg cagttgtttg
751 cactgcacat atgagaggct tacgaaagag agtggacttt cggtgtgata
801 cgtggaccgt tgtgcgtcta cagcatctcg ccaggacgga caagtggtct
851 aaccaagttc gtgctattga tctacgaaag ggcgatagtg gagttatatt
901 gagtaataga agtctcaaag gaaactttgg tagaagctcg gagggcctat
951 tcatagtgcg tgggtcgcac gaaggaaaaa tctatgatgc acgttccaag
1001 gttactcaa