Sequence of DPV Pea enation mosaic virus-2
Pea enation mosaic virus-2 strain UK RNA-dependent RNA-polymerase, phloem RNA movement protein, and cell-to-cell RNA movement protein genes, complete cds.
ACC No: AY714213
Dated: 2006-01-11 | Length: 4255 | CRC: -2031273672
ID AY714213 standard; genomic RNA; VRL; 4255 BP. XX AC AY714213; XX SV AY714213.1 XX DT 15-SEP-2004 (Rel. 81, Created) DT 11-JAN-2006 (Rel. 86, Last updated, Version 2) XX DE Pea enation mosaic virus-2 strain UK RNA-dependent RNA-polymerase, phloem DE RNA movement protein, and cell-to-cell RNA movement protein genes, complete DE cds. XX KW . XX OS Pea enation mosaic virus-2 OC Viruses; ssRNA positive-strand viruses, no DNA stage; Umbravirus. XX RN [1] RP 1-4255 RX PUBMED; 11038393. RA Mayo M., Ryabov E., Fraser G., Taliansky M.; RT "Mechanical transmission of Potato leafroll virus"; RL J. Gen. Virol. 81(Pt 11):2791-2795(2000). XX RN [2] RP 1-4255 RX DOI; 10.1006/viro.2001.0982. RX PUBMED; 11485404. RA Ryabov E.V., Fraser G., Mayo M.A., Barker H., Taliansky M.; RT "Umbravirus gene expression helps potato leafroll virus to invade mesophyll RT tissues and to be transmitted mechanically between plants"; RL Virology 286(2):363-372(2001). XX RN [3] RP 1-4255 RA Ryabov E.V.; RT ; RL Submitted (10-AUG-2004) to the EMBL/GenBank/DDBJ databases. RL Warwick-HRI, University of Warwick, Wellesbourne, Warwick CV35 9EF, United RL Kingdom XX FH Key Location/Qualifiers FH FT source 1. .4255 FT /country="United Kingdom" FT /db_xref="taxon:193120" FT /mol_type="genomic RNA" FT /organism="Pea enation mosaic virus-2" FT /strain="UK" FT /clone="p2-11" FT CDS join(21. .815,815. .2560) FT /codon_start=1 FT /db_xref="GOA:Q64EZ0" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR007095" FT /db_xref="UniProtKB/TrEMBL:Q64EZ0" FT /product="RNA-dependent RNA-polymerase" FT /ribosomal_slippage FT /protein_id="AAU20330.1" FT /translation="MNCVARIKRWFTPDFTPGEGVKSRAQLERELDPTWALLVCQERAR FT RDADSIANEWYEGSMECNLLIPRPTTEDVFGPSIAPEPVALVEETTRSHAPCVDVPAEE FT SSELAEIDPVDLAKYDSLHRRLLAEANPCREMVLWVPPGLPAERDVLPRARGVIMIPEV FT PASAYTLSVKVMEAVRLAQEVLASLAKRALEKRSRPTLTAQAQPEATLSGCDYPYQETG FT AAAAWITPGCIAMELRAKFGVCKRTPANLEMGSRVARELLRDNLCHLQGDHVVHQCHCC FT GPVADPDRRRPSLWSASGGFLVGAVLPRLGEDTSVRFDNLHPSIEVIKAARPRPTQRMS FT YQIDVVRPLGDFGVHNNSLVNLARGINERVFYTDNARTEPLKPKVPFPSSRELKTFRVT FT PWTMDRVVESYTGSQRTRYANARDSILSNPLSPKDARVKTFVKAEKINFTAKPDPAPRV FT IQPRDPRFNIVLAKYIKPLEPMLYKALGKLYKYPAVAKGFNAVETGEIIAGKWRCFKDP FT VVVGLDASRFDQHVSVEALQFTHAVYRGFIKSREFNNLLQMMYTNRGLGSTKDGFVRYK FT VKGRRMSGDMDTSLGNCVLMVLLTRNLCKVLGIPHELFNNGDDCIVFFDRCHLEKFNNA FT VKPYFADLGFKMKVEPPVDVLEKIEFCQTQPIYDGEKWRTVRCISSIGKDCSSVISWDQ FT LEGWWNAIAQSGLAVCGGMPIYTSFYRWLARAGKSGTKCQSHPLWKNEGLNWYRMGMDL FT SHEVNVTPQARLSFFAGFGISPPMQVAIEALYDKLPPPSPHHGPPVKVVTQRVFTNYFT FT PESACASMSTDEDNKSDFAVYGPVPTVMSLCAQC" FT CDS 2781. .3473 FT /codon_start=1 FT /db_xref="InterPro:IPR006902" FT /db_xref="UniProtKB/TrEMBL:Q64EY9" FT /note="ORF3; long distance RNA movement protein; RNA FT binding" FT /product="phloem RNA movement protein" FT /protein_id="AAU20331.1" FT /translation="MTIIINVNNDERKQPEGATGSSVRRGDNKRTRGNKPRSHHPGSRE FT RKGYTHPSPTPKNSRQGQLRTEAVQEHPKHGGTAFRRESGSSVHPSRPRRRARRCGDMA FT PRQHPPPPRERRTKTETQAERRAQALSVLPTLLDCIGGLDLGPAEVLLHCHRAVRKQLR FT TGVQPIQPVSHVESTHRSSDPQLLESPTTCSANLQNDGAGRVIGGGIPTAIPEGSDVEQ FT VCHASHYG" FT CDS 2797. .3549 FT /codon_start=1 FT /db_xref="GOA:Q64EY8" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:Q64EY8" FT /note="plasmodesmal" FT /product="cell-to-cell RNA movement protein" FT /protein_id="AAU20332.1" FT /translation="MSITTSASNQKELLAALYGEVTIKELEETNLGVITPVRANEKVTL FT TPLLPPKTQGRVSSVLKRFRSTRNTGGLLSVEKVVVVFTPHVPDDVLGDVEIWLHDSIL FT PHLGSVGPRLKLKLSEGPKLLAFYPPYSIALGDSISGQPRSFSIATELFESNFAPGCSP FT FSLFLMWSPRIEAVTHNYLSRPPRALPICRTMVRDALSEVASQQQYLKGAMSNRYAMPL FT TTGDGQHRAMKGAPSALPPTGVCTQASK" XX SQ Sequence 4255 BP; 955 A; 1172 C; 1206 G; 922 T; 0 other; ay714213 Length: 4255 11-JAN-2006 Type: N Check: 9656 .. 1 gggtatttat agagatcagt atgaactgtg tcgctagaat caagcggtgg 51 ttcacacctg acttcacccc tggcgagggc gtgaagtcta gagctcagct 101 ggaaagagag ttggatccca cctgggcgct tctcgtgtgc caagagcgag 151 cgcgtcgtga tgctgacagt attgctaatg agtggtacga gggcagcatg 201 gagtgcaacc tccttatccc tcggcccaca accgaggatg tatttggccc 251 ctccatcgcc cctgagcctg tggctctagt ggaggaaact acccgttccc 301 acgcgccgtg cgtggatgtc cctgccgagg agtccagtga gttagcggag 351 attgatcctg ttgatctcgc caagtacgac tccctccatc gtcgcctgtt 401 ggctgaggcc aacccttgca gggaaatggt tctgtgggtg cctcctggcc 451 taccagcaga gcgtgacgtc ctgcccaggg cacgtggggt gataatgatc 501 cccgaagtcc ctgcctctgc atacaccttg tccgtgaagg ttatggaggc 551 tgtgcggttg gcacaggaag tcttggcatc ccttgccaag agggccttag 601 agaaaaggtc cagacctacc cttaccgccc aggcccagcc agaggctacc 651 ctgtcggggt gcgactaccc gtatcaggag actggagcag cagccgcatg 701 gataactcct ggctgcattg ccatggagct cagagccaaa tttggcgtct 751 gcaaacgcac ccccgcaaac ttagagatgg ggagtcgtgt cgcccgcgag 801 ctcctgcggg ataactgtgt cacctgcagg gagaccacgt ggtacaccag 851 tgccattgct gtggacctgt ggctgacccc gaccgtcgtc gacctagcct 901 gtggtcggcg agcggcggat ttttggtagg ggctgtgctg cctcggctgg 951 gggaagacac tagtgtgcgg tttgacaacc tgcaccccag catcgaggta 1001 atcaaggcgg ctaggccccg cccaacccag aggatgtcgt accaaatcga 1051 cgttgtgcgt cctcttggag attttggtgt gcacaacaac tcccttgtca 1101 acctagccag gggaattaat gaaagggtgt tctacacgga caatgctagg 1151 acagaacccc ttaagcctaa ggttcccttc ccctcatcac gggagctgaa 1201 aaccttcagg gtcacccctt ggaccatgga tagggttgtg gagagttaca 1251 ctgggtccca gcgcactcgc tatgccaacg cgcgggacag catattatcc 1301 aacccactga gtcctaaaga tgcccgggtc aagacgtttg tcaaagctga 1351 aaagataaat ttcacagcca aacctgaccc cgcccctcgt gtgatacagc 1401 ctagggaccc acgattcaac attgtcctgg ctaaatacat caagcctttg 1451 gagccgatgc tgtacaaagc actggggaag ctttacaagt accctgcagt 1501 tgctaagggg tttaacgcgg ttgagacggg ggagatcatt gccggtaagt 1551 ggcggtgttt caaagatcct gtcgtcgtgg gactagacgc ttcccgattt 1601 gatcagcatg tgtctgttga ggcgttacag tttacccacg cggtgtacag 1651 agggttcatc aagtcacggg agttcaacaa cctcctgcag atgatgtaca 1701 ccaaccgtgg cctagggtct actaaggacg gattcgtccg ttacaaggtc 1751 aaaggtagac gcatgagcgg tgacatggac acctctttgg gcaactgtgt 1801 gctcatggtg ttgcttacca ggaatctttg caaggttcta ggcatcccgc 1851 acgagctttt caacaatggt gatgattgca tcgtcttttt cgatcgctgc 1901 cacttggaga agttcaacaa tgctgtcaaa ccttattttg cagacctagg 1951 gtttaagatg aaggttgaac cgccggttga cgtgctggag aaaatagagt 2001 tctgccaaac gcagcctata tatgacgggg agaagtggcg caccgtgcgc 2051 tgcatctcga gtatcgggaa agattgctca tccgttatta gctgggacca 2101 attggagggg tggtggaatg ccatcgccca gagtggtctg gctgtgtgtg 2151 gcgggatgcc gatatacacg tcgttctacc ggtggctagc acgggccggt 2201 aagagtggga ccaagtgcca gtcacacccc ttatggaaaa acgaggggtt 2251 gaattggtac aggatgggaa tggacctttc tcatgaggtc aatgtcaccc 2301 ctcaagcgcg cctgtccttt ttcgcgggtt ttggtatttc ccccccgatg 2351 caggtcgcca ttgaggcgct gtatgacaag ctacctccac cgtcccccca 2401 ccatggtcct ccggttaagg ttgtaacaca gcgagtgttc accaactatt 2451 tcacgccgga aagcgcctgt gctagcatga gcacggatga agacaacaaa 2501 tctgactttg ctgtttacgg ccctgtgcct acagtgatgt ctctttgtgc 2551 tcagtgttag gctttaaatt ttagcgatgg cgtgacacgg tcacaccctg 2601 aattgacagg gtacagatca agggaagccg gggagtcacc aaccccaccc 2651 tgaatcgaca gggcaaaaag ggaagccggg caccgcccac gtggaatcga 2701 ccacgtcacc ttttcgcgtc gactgtgtcg tcaacaccct ttcggcccgc 2751 cagcctagga caatggcgga tgggtaatat atgacgataa tcataaatgt 2801 caataacgac gagcgcaagc aaccagaagg agctactggc agctctgtac 2851 ggcgaggtga caataaaaga actcgaggaa acaaacctcg gagtcatcac 2901 cccggttcgc gcgaacgaaa aggttacact cacccctctc ctacccccaa 2951 aaactcaagg cagggtcagc tccgtactga agcggttcag gagcacccga 3001 aacacggggg gactgctttc cgtagagaaa gtggtagtag tgttcacccc 3051 tcacgtccca gacgacgtgc taggagatgt ggagatatgg ctccacgaca 3101 gcatcctccc ccacctcggg agcgtcggac caagactgaa actcaagctg 3151 agcgaagggc ccaagctctt agcgttttac ccaccctact cgattgcatt 3201 gggggactcg atctcgggcc agccgaggtc cttctccatt gccaccgagc 3251 tgttcgaaag caacttcgca ccggggtgca gcccattcag cctgtttctc 3301 atgtggagtc cacgcatcga agcagtgacc cacaattact tgagtcgccc 3351 accacgtgct ctgccaattt gcagaacgat ggtgcgggac gcgttatcgg 3401 aggtggcatc ccaacagcaa tacctgaagg gagcgatgtc gaacaggtat 3451 gccatgcctc tcactacggg tgatggccag catagagcca tgaagggggc 3501 tcccagtgcc cttccaccaa cgggggtgtg tacccaggct tctaagtgag 3551 gcttcgcttc ccgccggaag accgcggcgg ttctgttcct cccacaggag 3601 tacggcaaca acccaccttg ggaaagtggg gaccccagca ctaactcctt 3651 taactaggcg ggcgtgctgg ttacagtagg aggggacagt gcgcatcaaa 3701 actgagcccc accacaactc tcatccacag ggtggttggg acgcaggtgt 3751 cggagggatc gccagccctc aggatagtga gctcccgcag agggataagc 3801 tatctccctg cgacgtagtg gtagaacacg tgggataggg gatgaccttg 3851 tcgaccggtt atcggtcccc tgctccttcg agctggcaag gcgcccaaag 3901 gttctacact gctactaaag ttggtggtgg atgtctcgcc caaaaagatc 3951 ataaacgcgc gggataaggt ccctttccac cttcgccggg taaggctaga 4001 gtcagcgctg catgactata acttgcggcc gatccagttg cacgactggt 4051 ggtccccctc agtgtcttgg ttgtctgcca agtgggcggt ggtcggattc 4101 caccacaccc tgccacgagg tgcgtggaga cttggccagt ctaggctcgt 4151 cgtaattagt tgcagcgacg ttaatcaacc cgtccgggca tacaatagga 4201 ccggttgtgc ttcttcctcc ctttcttagc cagggtggtt acctccctgg 4251 cgccc