Sequence of DPV Pea enation mosaic virus-2
Pea enation mosaic virus-2 strain UK RNA-dependent RNA-polymerase, phloem RNA movement protein, and cell-to-cell RNA movement protein genes, complete cds.
ACC No: AY714213
Dated: 2006-01-11 | Length: 4255 | CRC: -2031273672
ID AY714213 standard; genomic RNA; VRL; 4255 BP.
XX
AC AY714213;
XX
SV AY714213.1
XX
DT 15-SEP-2004 (Rel. 81, Created)
DT 11-JAN-2006 (Rel. 86, Last updated, Version 2)
XX
DE Pea enation mosaic virus-2 strain UK RNA-dependent RNA-polymerase, phloem
DE RNA movement protein, and cell-to-cell RNA movement protein genes, complete
DE cds.
XX
KW .
XX
OS Pea enation mosaic virus-2
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Umbravirus.
XX
RN [1]
RP 1-4255
RX PUBMED; 11038393.
RA Mayo M., Ryabov E., Fraser G., Taliansky M.;
RT "Mechanical transmission of Potato leafroll virus";
RL J. Gen. Virol. 81(Pt 11):2791-2795(2000).
XX
RN [2]
RP 1-4255
RX DOI; 10.1006/viro.2001.0982.
RX PUBMED; 11485404.
RA Ryabov E.V., Fraser G., Mayo M.A., Barker H., Taliansky M.;
RT "Umbravirus gene expression helps potato leafroll virus to invade mesophyll
RT tissues and to be transmitted mechanically between plants";
RL Virology 286(2):363-372(2001).
XX
RN [3]
RP 1-4255
RA Ryabov E.V.;
RT ;
RL Submitted (10-AUG-2004) to the EMBL/GenBank/DDBJ databases.
RL Warwick-HRI, University of Warwick, Wellesbourne, Warwick CV35 9EF, United
RL Kingdom
XX
FH Key Location/Qualifiers
FH
FT source 1. .4255
FT /country="United Kingdom"
FT /db_xref="taxon:193120"
FT /mol_type="genomic RNA"
FT /organism="Pea enation mosaic virus-2"
FT /strain="UK"
FT /clone="p2-11"
FT CDS join(21. .815,815. .2560)
FT /codon_start=1
FT /db_xref="GOA:Q64EZ0"
FT /db_xref="InterPro:IPR002166"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="InterPro:IPR007095"
FT /db_xref="UniProtKB/TrEMBL:Q64EZ0"
FT /product="RNA-dependent RNA-polymerase"
FT /ribosomal_slippage
FT /protein_id="AAU20330.1"
FT /translation="MNCVARIKRWFTPDFTPGEGVKSRAQLERELDPTWALLVCQERAR
FT RDADSIANEWYEGSMECNLLIPRPTTEDVFGPSIAPEPVALVEETTRSHAPCVDVPAEE
FT SSELAEIDPVDLAKYDSLHRRLLAEANPCREMVLWVPPGLPAERDVLPRARGVIMIPEV
FT PASAYTLSVKVMEAVRLAQEVLASLAKRALEKRSRPTLTAQAQPEATLSGCDYPYQETG
FT AAAAWITPGCIAMELRAKFGVCKRTPANLEMGSRVARELLRDNLCHLQGDHVVHQCHCC
FT GPVADPDRRRPSLWSASGGFLVGAVLPRLGEDTSVRFDNLHPSIEVIKAARPRPTQRMS
FT YQIDVVRPLGDFGVHNNSLVNLARGINERVFYTDNARTEPLKPKVPFPSSRELKTFRVT
FT PWTMDRVVESYTGSQRTRYANARDSILSNPLSPKDARVKTFVKAEKINFTAKPDPAPRV
FT IQPRDPRFNIVLAKYIKPLEPMLYKALGKLYKYPAVAKGFNAVETGEIIAGKWRCFKDP
FT VVVGLDASRFDQHVSVEALQFTHAVYRGFIKSREFNNLLQMMYTNRGLGSTKDGFVRYK
FT VKGRRMSGDMDTSLGNCVLMVLLTRNLCKVLGIPHELFNNGDDCIVFFDRCHLEKFNNA
FT VKPYFADLGFKMKVEPPVDVLEKIEFCQTQPIYDGEKWRTVRCISSIGKDCSSVISWDQ
FT LEGWWNAIAQSGLAVCGGMPIYTSFYRWLARAGKSGTKCQSHPLWKNEGLNWYRMGMDL
FT SHEVNVTPQARLSFFAGFGISPPMQVAIEALYDKLPPPSPHHGPPVKVVTQRVFTNYFT
FT PESACASMSTDEDNKSDFAVYGPVPTVMSLCAQC"
FT CDS 2781. .3473
FT /codon_start=1
FT /db_xref="InterPro:IPR006902"
FT /db_xref="UniProtKB/TrEMBL:Q64EY9"
FT /note="ORF3; long distance RNA movement protein; RNA
FT binding"
FT /product="phloem RNA movement protein"
FT /protein_id="AAU20331.1"
FT /translation="MTIIINVNNDERKQPEGATGSSVRRGDNKRTRGNKPRSHHPGSRE
FT RKGYTHPSPTPKNSRQGQLRTEAVQEHPKHGGTAFRRESGSSVHPSRPRRRARRCGDMA
FT PRQHPPPPRERRTKTETQAERRAQALSVLPTLLDCIGGLDLGPAEVLLHCHRAVRKQLR
FT TGVQPIQPVSHVESTHRSSDPQLLESPTTCSANLQNDGAGRVIGGGIPTAIPEGSDVEQ
FT VCHASHYG"
FT CDS 2797. .3549
FT /codon_start=1
FT /db_xref="GOA:Q64EY8"
FT /db_xref="InterPro:IPR000603"
FT /db_xref="UniProtKB/TrEMBL:Q64EY8"
FT /note="plasmodesmal"
FT /product="cell-to-cell RNA movement protein"
FT /protein_id="AAU20332.1"
FT /translation="MSITTSASNQKELLAALYGEVTIKELEETNLGVITPVRANEKVTL
FT TPLLPPKTQGRVSSVLKRFRSTRNTGGLLSVEKVVVVFTPHVPDDVLGDVEIWLHDSIL
FT PHLGSVGPRLKLKLSEGPKLLAFYPPYSIALGDSISGQPRSFSIATELFESNFAPGCSP
FT FSLFLMWSPRIEAVTHNYLSRPPRALPICRTMVRDALSEVASQQQYLKGAMSNRYAMPL
FT TTGDGQHRAMKGAPSALPPTGVCTQASK"
XX
SQ Sequence 4255 BP; 955 A; 1172 C; 1206 G; 922 T; 0 other;
ay714213 Length: 4255 11-JAN-2006 Type: N Check: 9656 ..
1 gggtatttat agagatcagt atgaactgtg tcgctagaat caagcggtgg
51 ttcacacctg acttcacccc tggcgagggc gtgaagtcta gagctcagct
101 ggaaagagag ttggatccca cctgggcgct tctcgtgtgc caagagcgag
151 cgcgtcgtga tgctgacagt attgctaatg agtggtacga gggcagcatg
201 gagtgcaacc tccttatccc tcggcccaca accgaggatg tatttggccc
251 ctccatcgcc cctgagcctg tggctctagt ggaggaaact acccgttccc
301 acgcgccgtg cgtggatgtc cctgccgagg agtccagtga gttagcggag
351 attgatcctg ttgatctcgc caagtacgac tccctccatc gtcgcctgtt
401 ggctgaggcc aacccttgca gggaaatggt tctgtgggtg cctcctggcc
451 taccagcaga gcgtgacgtc ctgcccaggg cacgtggggt gataatgatc
501 cccgaagtcc ctgcctctgc atacaccttg tccgtgaagg ttatggaggc
551 tgtgcggttg gcacaggaag tcttggcatc ccttgccaag agggccttag
601 agaaaaggtc cagacctacc cttaccgccc aggcccagcc agaggctacc
651 ctgtcggggt gcgactaccc gtatcaggag actggagcag cagccgcatg
701 gataactcct ggctgcattg ccatggagct cagagccaaa tttggcgtct
751 gcaaacgcac ccccgcaaac ttagagatgg ggagtcgtgt cgcccgcgag
801 ctcctgcggg ataactgtgt cacctgcagg gagaccacgt ggtacaccag
851 tgccattgct gtggacctgt ggctgacccc gaccgtcgtc gacctagcct
901 gtggtcggcg agcggcggat ttttggtagg ggctgtgctg cctcggctgg
951 gggaagacac tagtgtgcgg tttgacaacc tgcaccccag catcgaggta
1001 atcaaggcgg ctaggccccg cccaacccag aggatgtcgt accaaatcga
1051 cgttgtgcgt cctcttggag attttggtgt gcacaacaac tcccttgtca
1101 acctagccag gggaattaat gaaagggtgt tctacacgga caatgctagg
1151 acagaacccc ttaagcctaa ggttcccttc ccctcatcac gggagctgaa
1201 aaccttcagg gtcacccctt ggaccatgga tagggttgtg gagagttaca
1251 ctgggtccca gcgcactcgc tatgccaacg cgcgggacag catattatcc
1301 aacccactga gtcctaaaga tgcccgggtc aagacgtttg tcaaagctga
1351 aaagataaat ttcacagcca aacctgaccc cgcccctcgt gtgatacagc
1401 ctagggaccc acgattcaac attgtcctgg ctaaatacat caagcctttg
1451 gagccgatgc tgtacaaagc actggggaag ctttacaagt accctgcagt
1501 tgctaagggg tttaacgcgg ttgagacggg ggagatcatt gccggtaagt
1551 ggcggtgttt caaagatcct gtcgtcgtgg gactagacgc ttcccgattt
1601 gatcagcatg tgtctgttga ggcgttacag tttacccacg cggtgtacag
1651 agggttcatc aagtcacggg agttcaacaa cctcctgcag atgatgtaca
1701 ccaaccgtgg cctagggtct actaaggacg gattcgtccg ttacaaggtc
1751 aaaggtagac gcatgagcgg tgacatggac acctctttgg gcaactgtgt
1801 gctcatggtg ttgcttacca ggaatctttg caaggttcta ggcatcccgc
1851 acgagctttt caacaatggt gatgattgca tcgtcttttt cgatcgctgc
1901 cacttggaga agttcaacaa tgctgtcaaa ccttattttg cagacctagg
1951 gtttaagatg aaggttgaac cgccggttga cgtgctggag aaaatagagt
2001 tctgccaaac gcagcctata tatgacgggg agaagtggcg caccgtgcgc
2051 tgcatctcga gtatcgggaa agattgctca tccgttatta gctgggacca
2101 attggagggg tggtggaatg ccatcgccca gagtggtctg gctgtgtgtg
2151 gcgggatgcc gatatacacg tcgttctacc ggtggctagc acgggccggt
2201 aagagtggga ccaagtgcca gtcacacccc ttatggaaaa acgaggggtt
2251 gaattggtac aggatgggaa tggacctttc tcatgaggtc aatgtcaccc
2301 ctcaagcgcg cctgtccttt ttcgcgggtt ttggtatttc ccccccgatg
2351 caggtcgcca ttgaggcgct gtatgacaag ctacctccac cgtcccccca
2401 ccatggtcct ccggttaagg ttgtaacaca gcgagtgttc accaactatt
2451 tcacgccgga aagcgcctgt gctagcatga gcacggatga agacaacaaa
2501 tctgactttg ctgtttacgg ccctgtgcct acagtgatgt ctctttgtgc
2551 tcagtgttag gctttaaatt ttagcgatgg cgtgacacgg tcacaccctg
2601 aattgacagg gtacagatca agggaagccg gggagtcacc aaccccaccc
2651 tgaatcgaca gggcaaaaag ggaagccggg caccgcccac gtggaatcga
2701 ccacgtcacc ttttcgcgtc gactgtgtcg tcaacaccct ttcggcccgc
2751 cagcctagga caatggcgga tgggtaatat atgacgataa tcataaatgt
2801 caataacgac gagcgcaagc aaccagaagg agctactggc agctctgtac
2851 ggcgaggtga caataaaaga actcgaggaa acaaacctcg gagtcatcac
2901 cccggttcgc gcgaacgaaa aggttacact cacccctctc ctacccccaa
2951 aaactcaagg cagggtcagc tccgtactga agcggttcag gagcacccga
3001 aacacggggg gactgctttc cgtagagaaa gtggtagtag tgttcacccc
3051 tcacgtccca gacgacgtgc taggagatgt ggagatatgg ctccacgaca
3101 gcatcctccc ccacctcggg agcgtcggac caagactgaa actcaagctg
3151 agcgaagggc ccaagctctt agcgttttac ccaccctact cgattgcatt
3201 gggggactcg atctcgggcc agccgaggtc cttctccatt gccaccgagc
3251 tgttcgaaag caacttcgca ccggggtgca gcccattcag cctgtttctc
3301 atgtggagtc cacgcatcga agcagtgacc cacaattact tgagtcgccc
3351 accacgtgct ctgccaattt gcagaacgat ggtgcgggac gcgttatcgg
3401 aggtggcatc ccaacagcaa tacctgaagg gagcgatgtc gaacaggtat
3451 gccatgcctc tcactacggg tgatggccag catagagcca tgaagggggc
3501 tcccagtgcc cttccaccaa cgggggtgtg tacccaggct tctaagtgag
3551 gcttcgcttc ccgccggaag accgcggcgg ttctgttcct cccacaggag
3601 tacggcaaca acccaccttg ggaaagtggg gaccccagca ctaactcctt
3651 taactaggcg ggcgtgctgg ttacagtagg aggggacagt gcgcatcaaa
3701 actgagcccc accacaactc tcatccacag ggtggttggg acgcaggtgt
3751 cggagggatc gccagccctc aggatagtga gctcccgcag agggataagc
3801 tatctccctg cgacgtagtg gtagaacacg tgggataggg gatgaccttg
3851 tcgaccggtt atcggtcccc tgctccttcg agctggcaag gcgcccaaag
3901 gttctacact gctactaaag ttggtggtgg atgtctcgcc caaaaagatc
3951 ataaacgcgc gggataaggt ccctttccac cttcgccggg taaggctaga
4001 gtcagcgctg catgactata acttgcggcc gatccagttg cacgactggt
4051 ggtccccctc agtgtcttgg ttgtctgcca agtgggcggt ggtcggattc
4101 caccacaccc tgccacgagg tgcgtggaga cttggccagt ctaggctcgt
4151 cgtaattagt tgcagcgacg ttaatcaacc cgtccgggca tacaatagga
4201 ccggttgtgc ttcttcctcc ctttcttagc cagggtggtt acctccctgg
4251 cgccc