Sequence of DPV Potato virus Y
Potato virus Y isolate N:O-Mb55 polyprotein gene, partial cds.
ACC No: AY745495
Dated: 2005-06-18 | Length: 2816 | CRC: 213243043
!!NA_SEQUENCE 1.0
ID AY745495 standard; genomic RNA; VRL; 2816 BP.
XX
AC AY745495;
XX
SV AY745495.1
XX
DT 12-OCT-2004 (Rel. 81, Created)
DT 18-JUN-2005 (Rel. 84, Last updated, Version 2)
XX
DE Potato virus Y isolate N:O-Mb55 polyprotein gene, partial cds.
XX
KW .
XX
OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-2816
RA Nie X., Singh R.P., Singh M.;
RT "Molecular and pathological characterization of N:O isolates of the Potato
RT virus Y from Manitoba, Canada";
RL Can. J. Plant Pathol. 26:573-583(2004).
XX
RN [2]
RP 1-2816
RA Nie X., Singh R.P., Singh M.;
RT ;
RL Submitted (09-SEP-2004) to the EMBL/GenBank/DDBJ databases.
RL Potato Research Centre, Agriculture and Agri-Food Canada, 850 Lincoln Road,
RL P.O. Box 20280, Fredericton, NB E3B 4Z7, Canada
XX
FH Key Location/Qualifiers
FH
FT source 1. .2816
FT /country="Canada"
FT /db_xref="taxon:12216"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Potato virus Y"
FT /isolate="N:O-Mb55"
FT 5'UTR 1. .188
FT CDS 189. .>2816
FT /codon_start=1
FT /db_xref="GOA:Q5XNR2"
FT /db_xref="InterPro:IPR001456"
FT /db_xref="InterPro:IPR002540"
FT /db_xref="InterPro:IPR006662"
FT /db_xref="UniProt/TrEMBL:Q5XNR2"
FT /note="contains P1, HC/Pro, and P3"
FT /product="polyprotein"
FT /protein_id="AAU95469.1"
FT /translation="MATYTSTIQFGSIECKLPYSPAPFGLVAGKREVSTTTDPFASLEM
FT QLSARLRRQEFATIRTSKNGTCMYRYKTDVQIARIQKKREEREREEYNFQMAASSVVSK
FT ITIAGGEPPSKLESQVRRGVIHTTPRMRTAKTYHTPKLTEGQMNHLIKQVKQIMSTKGG
FT SVQLISKKSTHVHYKEVLGSHRAVVCTAHMRGLRKRVDFRCDKWTVVCLQHLARTDKWT
FT NQVRATDLRKGDSGVILSNTNLKGNFGRSSEGLFIVRGSHEGKIYDARSKVTQGVMDSM
FT VQFSSAESFWKGLDGNWAQMRYPTDHTCVAGLPVEDCGRVAAIMTHSILPCYKITCPTC
FT AQQYANLPASDLLKILHKHASDGLNRLGADKDRFVHVKKFLTILEHLTEPVDLSLEIFN
FT EVFKSIGEKQQSPFKNLNILNNFFLKGKENTAREWQVAQLSLLELARFQKNRTDNIKKG
FT DISFFRNKLSAKANWNLYLSCDNQLDKNANFLWGQREYHAKRFFSNYFEEIDPAKGYSA
FT YENRLHPNGTRKLAIGNLIVPLDLAEFRRKMKGDYKRQPGVSKKCTSSKDGNYVYPCCC
FT TTLDDGSAVESTFYPPTKKHLVIGNSGDQKYVDLPKGNSEMLYIARQGFCYINIFLAML
FT INISEEDAKDFTKKVRDMCVPKLGTWPTMMDLATTCAQMKIFYPDVHDAELPRILVDHE
FT TQTCHVVDSFGSQTTGYHILKASSVSQLILFANDELESDIKHYRVGGVPNACPELGSTI
FT SPFREGGVIMSESAALKLLLKGIFRPKVMRQLLLDEPYLLILSILSPGILMAMYNNGIF
FT ELAVRLWINEKQSIAMIASLLSALALRVSAAETLVAQRIIIDTAATDLLDATCDGFNLH
FT LTYPT"
XX
SQ Sequence 2816 BP; 887 A; 553 C; 632 G; 744 T; 0 other;
AY745495 Length: 2816 June 21, 2005 08:54 Type: N Check: 7075 ..
1 aattaaaaca actcaataca acataagaaa atcaacgcaa aaacactcac
51 aaaagctttc aactctattt caaacaattt gttaagtttc aatttcgatc
101 ttcatcaaac aaactctttc aatttcagtg taagctatcg taattcagta
151 agttatttca aactctcgta aattgcagaa gatcatccat ggcaacttac
201 acatcaacaa tccagtttgg ttccattgaa tgcaaacttc catactcacc
251 cgctcctttt gggctagttg cggggaaacg agaagtttca accaccactg
301 accccttcgc aagtttggag atgcagctta gtgcgcgatt acgaaggcaa
351 gagtttgcaa ctattcgaac atccaagaat ggtacttgca tgtatcgata
401 caagactgat gtccagattg cgcgcattca aaagaagcgc gaggaaagag
451 aaagagagga atataatttc caaatggctg cgtcaagtgt tgtgtcgaag
501 atcactattg ctggtggaga gccaccttca aaacttgaat cacaagtgcg
551 gaggggtgtc atccacacaa ctccaaggat gcgcacagca aaaacatatc
601 acacgccaaa gttgacagag ggacaaatga accaccttat caagcaggtg
651 aagcaaatta tgtcaaccaa aggagggtct gttcaactga ttagcaagaa
701 aagtacccat gttcactata aagaagtttt gggatcacat cgcgcagttg
751 tttgcactgc acatatgaga ggtttacgaa agagagtgga ctttcggtgc
801 gataaatgga ccgttgtgtg tctacagcat ctcgccagga cggacaagtg
851 gactaaccaa gttcgtgcta ctgatctacg caagggcgat agtggagtta
901 tattgagtaa tactaatctc aaaggaaact ttgggagaag ctcggagggc
951 ctattcatag tgcgtgggtc gcacgaagga aaaatctatg atgcacgttc
1001 caaggttacc caaggggtta tggattcaat ggttcagttc tcaagcgctg
1051 aaagcttttg gaagggattg gatggcaatt gggcacaaat gagataccct
1101 acagatcata catgtgtggc aggcttacca gttgaagact gtggcagagt
1151 tgcagcgata atgacacaca gtattttacc gtgctataag ataacctgcc
1201 ctacctgtgc ccaacaatat gccaacttgc cagccagtga cttacttaag
1251 atattacaca agcacgcaag tgatggttta aatcgattgg gggcagacaa
1301 agaccgcttt gtgcatgtca aaaagttctt gacaatctta gagcacttaa
1351 ctgaaccggt tgatctgagt ctagaaattt tcaatgaagt attcaagtct
1401 ataggggaga agcaacaatc acctttcaaa aacctgaata ttctgaataa
1451 tttctttttg aaaggaaagg aaaatacagc tcgtgaatgg caggtggctc
1501 aattaagctt acttgaattg gcaagattcc aaaagaacag aacggataat
1551 atcaagaaag gagacatctc gttctttagg aataaactat ctgccaaagc
1601 aaattggaac ttgtatcttt catgtgataa ccagctggat aagaatgcaa
1651 acttcctgtg gggacagagg gaatatcatg ctaagcgatt tttctcgaac
1701 tatttcgagg aaattgatcc agcgaagggc tattcagcat acgaaaatcg
1751 tttgcatccg aatgggacaa gaaaacttgc aattggaaac ctaattgtac
1801 cacttgatct ggctgagttt aggcggaaga tgaaaggtga ttataaaaga
1851 cagccagggg tgagtaagaa gtgcacgagc tcgaaggatg gaaactacgt
1901 gtatccctgt tgttgcacta cacttgatga tggctcagct gttgaatcaa
1951 cattttaccc gccaactaag aagcacctcg taataggcaa tagtggcgat
2001 caaaagtatg ttgacttacc aaaagggaat tctgagatgt tatatattgc
2051 caggcaaggc ttctgttaca ttaacatttt cctcgcgatg ttaattaaca
2101 ttagtgagga agatgcaaag gatttcacta agaaggttcg tgacatgtgt
2151 gtgccaaagc ttggaacctg gccaaccatg atggatctgg ctacaacttg
2201 tgctcaaatg aaaatatttt accctgatgt tcatgatgca gaactgccta
2251 gaatactagt cgatcacgaa acgcagacat gccatgtggt tgactcgttt
2301 ggctcacaaa caactgggta tcatattttg aaagcatcta gcgtgtccca
2351 acttatttta tttgctaatg atgagttgga gtctgacatt aagcactata
2401 gagttggtgg tgttcctaat gcatgccctg aacttgggtc cacaatatca
2451 cctttcagag aaggaggagt tataatgtct gagtcggcag cgctgaaact
2501 gcttttgaag ggaattttta gacctaaggt gatgagacag ttgctgttag
2551 atgagcctta cctgttgatt ctatcaatat tatcccctgg catactgatg
2601 gctatgtaca ataatgggat ttttgaactt gcggtaaggt tgtggattaa
2651 tgagaaacaa tccatagcta tgatagcatc gctactatca gctttagccc
2701 tacgagtgtc agcggcagaa acacttgtcg cacagaggat tataattgat
2751 actgcagcta cagatctcct tgatgctacg tgcgatgggt tcaacctaca
2801 tctaacgtac cccact