Sequence of DPV Torque teno sus virus 1b
Torque teno sus virus 2 isolate 1p, complete genome.
ACC No: AY823990
Dated: 2009-10-31 | Length: 2872 | CRC: 653439028
ID AY823990; SV 1; circular; genomic DNA; STD; VRL; 2872 BP.
XX
AC AY823990;
XX
DT 11-FEB-2005 (Rel. 82, Created)
DT 31-OCT-2009 (Rel. 102, Last updated, Version 4)
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DE Torque teno sus virus 2 isolate 1p, complete genome.
XX
KW .
XX
OS Torque teno sus virus 2
OC Viruses; ssDNA viruses; Anelloviridae; Iotatorquevirus.
XX
RN [1]
RP 1-2872
RX PUBMED; 15831945.
RA Niel C., Diniz-Mendes L., Devalle S.;
RT "Rolling-circle amplification of Torque teno virus (TTV) complete genomes
RT from human and swine sera and identification of a novel swine TTV
RT genogroup";
RL J. Gen. Virol. 86(PT 5):1343-1347(2005).
XX
RN [2]
RP 1-2872
RA Niel C., Diniz-Mendes L., Devalle S.;
RT ;
RL Submitted (12-NOV-2004) to the EMBL/GenBank/DDBJ databases.
RL Virology, Oswaldo Cruz Institute, Av. Brasil, 4365, Rio de Janeiro, RJ
RL 21045-900, Brazil
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FH Key Location/Qualifiers
FH
FT source 1. .2872
FT /organism="Torque teno sus virus 2"
FT /host="swine"
FT /isolate="1p"
FT /mol_type="genomic DNA"
FT /country="Brazil"
FT /db_xref="taxon:687387"
FT CDS join(428. .642,2008. .2479)
FT /codon_start=1
FT /product="ORF3"
FT /db_xref="UniProtKB/TrEMBL:Q5ENW9"
FT /protein_id="AAW79283.1"
FT /translation="MPEHWEEAWLEATKGWHDLDCRCGNWQDHLWLLLADGDAALAAAV
FT DAIERDAMAGDDATTATGRVTIGDDGCLEVNTNPPQESGIHALIHQPILCRSQEVLHTP
FT NSPEKEECSRKQTVGVSLLPLPEPSVQIHPQRQRKVHFSEGTRKRKERKPRKPRHRPVS
FT RVPKALLREMDRLMMKRQSDAEGGPGSDSDEWSESSLTDEWTTSDSDFIDTPIRERCLN
FT KKQKKR"
FT CDS 428. .646
FT /codon_start=1
FT /product="ORF2"
FT /db_xref="UniProtKB/TrEMBL:Q5ENW8"
FT /protein_id="AAW79282.1"
FT /translation="MPEHWEEAWLEATKGWHDLDCRCGNWQDHLWLLLADGDAALAAAV
FT DAIERDAMAGDDATTATGRVTIGDDGW"
FT CDS 517. .2430
FT /codon_start=1
FT /product="ORF1"
FT /db_xref="InterPro:IPR004219"
FT /db_xref="UniProtKB/TrEMBL:Q5ENW7"
FT /protein_id="AAW79281.1"
FT /translation="MAPTRRWRRRFGRRRRRYRKRRYGWRRRYYRYRPRDYRRRWLVRR
FT RRRSVYRRGGRRARPYRLFNPKVMRRVVIRGWWPILQCLKGQEALRYRPLQWDTERQWR
FT VRSDFEDQYGYLVQYGGGWGSGDVTLEGLYQEHLLWRNSWSKGNDGMDLVRYFGCVVYL
FT YPLKDQDYWFWWDTDFKELYAENIKEYSQPSVMMMAKRTRIVIARERAPHRRKVRKIFI
FT PPPSRDTTQWQFQTDFCNRKLFTWAAGLIDMQKPFDANGAFRNAWWLEQRNDQGEMKYI
FT ELWGRVPPQGDSELPKKKEFSTGTDNPNYNVQDNEEKNIYPIIIYVDQKDQKPRKKYCV
FT CYNKTLNRWRLGQASTLKIGNLKGLVLRQLMNQEMTYIWKEGEYSAPFVQRWKGSRFAV
FT IDARKADQENPKVSTWPIEGTWNTQDTVLKDVFGINLQNQQFRAADFGKLTLPKSPHDL
FT DFGHHSRFGPFCVKNEPLEFQVYPPEPTNLWFQYRFFFQFGGEYQPPTGIRDPCVDTPA
FT YPVPQSGSITHPKFAGKGGMLTETDRWGITAASSRALSADTPTEAAQSALLRGDSEAKG
FT EETEETASSSSITSAESSTEGDGSSDDEETIRRRRRTWKRLRRMVREQLDRRMDHKRQR
FT LH"
XX
SQ Sequence 2872 BP; 872 A; 658 C; 783 G; 545 T; 14 other;
ay823990 Length: 2872 31-OCT-2009 Type: N Check: 4412 ..
1 tacactttgg ggttcaggag gctcaatttg gctcgcttcg ctcgcaccac
51 gtttgctgcc aggcggacct gattgaagac tgaaaaccgt taaattcaaa
101 attgaaaagg gcgggcaaaa tggcggacag ggggcggagt ttatgcaaat
151 taatttatgc aaagtaggag gagctcgatt ttaatttatg caaagtagga
201 ggagtcaaat ctgattggtc gggagctcaa gtcctcattt gcatagggtg
251 taaccaatca gaattaaggc gttcccacga aagcgaatat aagtaggtga
301 ggttccgaat ggctgagttt atgccgccag cggtagacag aactgtctag
351 cgactgggcg ggtgccggag gatccctgat ccggagtcaa ggggcctatc
401 gggcaggagc agctaggcgg agggcctatg ccggaacact gggaggaagc
451 ctggttggaa gctaccaagg gctggcacga tctcgactgc cgctgcggta
501 actggcagga ccacctatgg ctcctactcg ccgatggaga cgccgctttg
551 gccgccgccg tagacgctat agaaagagac gctatggctg gagacgacgc
601 tactaccgct acaggccgcg tgactatcgg cgacgatggc tggtaaggag
651 aaggcggcgt tccgtctacc gtagaggtgg acgtagagcg cgcccctacc
701 gactgtttaa tccaaaagta atgcggagag tagtaattag ggggtggtgg
751 cctattttac aatgcttaaa aggacaggag gcactaagat atagacctct
801 acagtgggac acagagagac agtggagagt gagatcagac ttcgaagacc
851 agtacggata cctcgtacaa tacgggggag gttggggaag tggtgatgtg
901 acacttgaag gtctctacca agagcactta ttgtggagaa actcttggtc
951 taaaggaaac gatggaatgg acctagtaag atactttgga tgtgtagtat
1001 acctatatcc actaaaggac caggactatt ggttctggtg ggacacggac
1051 ttcaaagaat tatatgcaga aaacataaag gaatacagcc aaccatcagt
1101 aatgatgatg gcaaaaagaa caagaatagt aatagccaga gaaagggcac
1151 cacatagaag aaaagtaaga aaaatattta ttccgccacc ttcgagagac
1201 acaacacagt ggcagtttca gacagatttc tgcaatagaa agttatttac
1251 gtgggcagct ggtctaatag acatgcaaaa accgttcgat gctaatggag
1301 cctttagaaa tgcttggtgg ctggaacaga gaaatgatca gggagaaatg
1351 aaatacatag aactgtgggg aagagtaccc ccacaaggag attcagagct
1401 gcccaaaaaa aaagaattct ccacaggaac agataaccca aactacaatg
1451 ttcaggacaa tgaggagaaa aacatatacc ccattataat atacgtagac
1501 caaaaagatc aaaaaccaag aaaaaagtac tgcgtatgtt ataataagac
1551 cctcaacaga tggagactag gacaggcaag tactctaaag ataggaaacc
1601 tgaaaggact agtactaaga cagctgatga atcaagaaat gacgtatata
1651 tggaaagaag gagaatacag tgcccccttt gtacaaaggt ggaaaggcag
1701 cagattcgct gtgatagacg caagaaaggc agaccaagaa aacccgaaag
1751 tatcaacatg gccaattgag ggaacgtgga acacacagga cacagtactg
1801 aaggatgtat tcggtattaa cttgcaaaat caacaattta gggcggcgga
1851 ctttggtaaa ctcacactac caaaatcacc gcatgactta gacttcggtc
1901 accacagcag atttgggcca ttttgtgtga aaaatgaacc actggagttt
1951 caggtatacc ctccagaacc aactaacttg tggtttcagt acagattttt
2001 ctttcagttt ggaggtgaat accaaccccc cacaggaatc cgggatccat
2051 gcgttgatac accagcctat cctgtgccgc agtcaggaag tattacacac
2101 cccaaattcg ccggaaaagg aggaatgctc acggaaacag accgttgggg
2151 tatcactgct gcctcttcca gagccctcag tgcagataca cccacagagg
2201 cagcgcaaag tgcacttctc cgaggggact cggaagcgaa aggagaggaa
2251 accgaggaaa ccgcgtcatc gtccagtatc acgagtgccg aaagctctac
2301 tgagggagat ggatcgtctg atgatgaaga gacaatcaga cgcagaagga
2351 ggacctggaa gcgactcaga cgaatggtca gagagcagct tgaccgacga
2401 atggaccaca agcgacagcg acttcattga cacccccata agagaaagat
2451 gcctcaataa aaaacaaaag aaacgctaaa cagtgtccga ttactaatgg
2501 gggggggtcc ggggggggct tgcccccccg caagctgggt taccgcacta
2551 actccctgcc aagtgaaact cggggacgag tgagtgcggg acatcccgtg
2601 taatggctac ataactaccc ggctttgctt cgacagtggc cgtggctcga
2651 ccctcacaca acactgcagg tagggggcgc aattgggatc gttagaaaac
2701 tatggccgag catgggggnn nnnnnnnnnn nnccaacccc cccggtgggg
2751 gggccaaggc cccccctaca cccccccatg gggggctgcc gccccccaaa
2801 ccccccgcgt cggatggggg gggctgcgcc ccccccaaac cccccttgcc
2851 cggggctgtg ccccggaccc cc