Sequence of DPV Torque teno sus virus k2
Torque teno sus virus 2 isolate 2p, complete genome.
ACC No: AY823991
Dated: 2010-11-19 | Length: 2735 | CRC: 663191774
ID AY823991; SV 1; circular; genomic DNA; STD; VRL; 2735 BP.
XX
AC AY823991;
XX
DT 11-FEB-2005 (Rel. 82, Created)
DT 19-NOV-2010 (Rel. 106, Last updated, Version 4)
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DE Torque teno sus virus 2 isolate 2p, complete genome.
XX
KW .
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OS Torque teno sus virus 2
OC Viruses; ssDNA viruses; Anelloviridae; Iotatorquevirus.
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RN [1]
RP 1-2735
RX DOI; 10.1099/vir.0.80794-0.
RX PUBMED; 15831945.
RA Niel C., Diniz-Mendes L., Devalle S.;
RT "Rolling-circle amplification of Torque teno virus (TTV) complete genomes
RT from human and swine sera and identification of a novel swine TTV
RT genogroup";
RL J. Gen. Virol. 86(Pt 5):1343-1347(2005).
XX
RN [2]
RP 1-2735
RA Niel C., Diniz-Mendes L., Devalle S.;
RT ;
RL Submitted (12-NOV-2004) to the EMBL/GenBank/DDBJ databases.
RL Virology, Oswaldo Cruz Institute, Av. Brasil, 4365, Rio de Janeiro, RJ
RL 21045-900, Brazil
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FH Key Location/Qualifiers
FH
FT source 1. .2735
FT /organism="Torque teno sus virus 2"
FT /host="swine"
FT /isolate="2p"
FT /mol_type="genomic DNA"
FT /country="Brazil"
FT /db_xref="taxon:687387"
FT CDS join(393. .595,1934. .2330)
FT /codon_start=1
FT /product="ORF3"
FT /db_xref="UniProtKB/TrEMBL:Q5ENW6"
FT /protein_id="AAW79286.1"
FT /translation="MEERWLTVAYCAHGLFCSCKDPKKHLEKCLTDAIADAEEDRHGDG
FT GTGGGDATFDIGIDALLAAAAQSGEDMAQKDLKPTSETPAPYPAPSNPGTASTAGYKTP
FT PRYKTPSSTPGTMTVMGLLEKILSKDFSNSPQRQRRRRRRTHSLDKKQRKSHYQTPTKR
FT ALSQARAVDPLKKKKRRDEDTTSQASDDSSSTSSGW"
FT CDS 393. .599
FT /codon_start=1
FT /product="ORF2"
FT /db_xref="UniProtKB/TrEMBL:Q5ENW5"
FT /protein_id="AAW79285.1"
FT /translation="MEERWLTVAYCAHGLFCSCKDPKKHLEKCLTDAIADAEEDRHGDG
FT GTGGGDATFDIGIDALLAAAAQR"
FT CDS 476. .2350
FT /codon_start=1
FT /product="ORF1"
FT /db_xref="InterPro:IPR004219"
FT /db_xref="UniProtKB/TrEMBL:Q5ENW4"
FT /protein_id="AAW79284.1"
FT /translation="MPYRRYRRRRRRPTRRWRHRRWRRYFRYRYRRAPRRRRTKVRRRR
FT KKAPVIQWFPPSRRTCLIEGFWPLSYGHWFRTCLPFRRLNGLVFPGGGCDWSQWSLQNL
FT YNEKLNWRNIWTASNVGMEFARFLKGKFYFFRHPWRNYIITWDQDIPCRPLPYQNLHPL
FT LMLLKKQHKIVLSQQNCNPNRKQKPVTLKFKPPPKLTSQWRLSRELAKMPLIRLGVSFI
FT DLTEPWVEGWGNAFYSVLGYEAVKDQGHWSNWTQIKYYWIYDTGVGNAVYVILLKKDVT
FT DNPGNMATTFKASGGQHPDAIDHIELINQGWPYWLYFYGKSEQDIKKEAHSAEISREYT
FT RDPKSKKLKIGIVGWASSNYTTTGSDQNSGGSTSAIQGGYVAYAGSGVIGAGSIGNLYQ
FT QGWPSNQNWPNTNRDKTNFDWGIRGLCILRDNMHLGSQELDDECTMLTLFGPFVEKANP
FT IFATTDPKFFKPELKDYNIIMKYAFKFQWGGHGTERFKTNIGDPSTIPCPFEPGDRFHS
FT GIQDPSKVQNTVLNPWDYDCDGIVRKDTLKRLLELPTETEEEEKAYPLLGQKTEKEPLS
FT DSDEESVISSTSSGSSQEEETQRRRHHKPSKRRLLKHLQRVVKRMKTL"
XX
SQ Sequence 2735 BP; 946 A; 623 C; 604 G; 535 T; 27 other;
ay823991 Length: 2735 19-NOV-2010 Type: N Check: 4281 ..
1 tcatgacagg gttcaccgga agggctgcaa aattacagct aaaaccacaa
51 gtctaacaca ataaaccaca aagtattaca ggaaactgca ataaatttag
101 aaataagtta cacataacca ccaaaccaca ggaaactgtg caaaaaagag
151 gaaataaatt tcattggctg ggcctgaagt cctcattaga ataataaaag
201 aaccaatcag aagaacttcc tcttttagag tatataagta agtgcgcaga
251 cgaatggctg agtttatgcc gctggtggta gacacgaaca gagctgagtg
301 tctaaccgcc tgggcgggtg ccggagctcc tgagagcgga gtcaaggggc
351 ctatcgggca ggcggtaatc cagcggaacc gggcccccct cgatggaaga
401 aagatggctg acggtagcgt actgcgcaca cggattattc tgcagctgta
451 aagacccgaa aaaacatctt gaaaaatgcc ttacagacgc tatcgcagac
501 gccgaagaag accgacacgg agatggaggc accggaggtg gagacgctac
551 tttcgatatc ggtatcgacg cgctcctcgc cgccgccgca caaaggtaag
601 gagacggagg aaaaaagctc cggtcataca atggttccct cctagccgga
651 gaacctgcct catagaggga ttttggccgt tgagctacgg acactggttc
701 cgtacctgtc tcccctttag gcggttaaat ggactagtat tcccgggtgg
751 aggttgtgac tggagccagt ggagtttaca aaacctttac aatgaaaaac
801 ttaactggag aaatatatgg acagctagta atgttggaat ggaattcgct
851 agatttttaa aaggaaagtt ttactttttc agacatccat ggagaaatta
901 tataataact tgggatcaag atataccatg caggccacta ccttatcaaa
951 acctgcatcc actcctaatg ctactaaaaa aacagcacaa aattgtactt
1001 tcacagcaaa actgtaaccc aaacagaaaa caaaaacctg tcacattaaa
1051 attcaaacct ccgccaaaac taacatcaca atggagacta agtagagaat
1101 tagcaaagat gccactaata agacttggag taagctttat agacctaaca
1151 gaaccatggg tagaagggtg gggaaatgca ttttattccg tgctaggata
1201 tgaagcagta aaagaccaag gacactggtc aaactggaca caaataaaat
1251 actattggat ctatgacacg ggagtaggaa atgcagtata tgttatacta
1301 ttaaaaaaag acgttactga taatccagga aacatggcaa caacctttaa
1351 agcatcagga ggacagcatc cagatgcaat agatcacatt gaattgataa
1401 accaaggatg gccttactgg ttatactttt atggtaaaag tgaacaagac
1451 attaaaaaag aggcacacag cgcagaaata tcaagagaat atactagaga
1501 cccaaaatct aaaaaactaa aaataggaat agtaggatgg gcatcttcaa
1551 actacacaac aacaggcagt gatcaaaaca gtggtggatc aacatcagct
1601 atacaaggtg gatatgtagc atatgcaggg tccggggtca taggagcagg
1651 gtcaatagga aatttatatc aacaaggatg gccatctaat caaaactggc
1701 ctaatacaaa cagagacaaa acaaactttg actggggaat acgaggacta
1751 tgtatactca gagataacat gcacttagga agccaagaat tagatgatga
1801 atgcacaatg ctcacattgt tcggaccctt tgtagaaaaa gcaaatccaa
1851 tatttgcaac aacagaccct aaattcttta aacctgaact caaagactat
1901 aatataatca tgaaatatgc ctttaaattt cagtggggag gacatggcac
1951 agaaagattt aaaaccaaca tcggagaccc cagcaccata ccctgcccct
2001 tcgaacccgg ggaccgcttc cacagcggga tacaagaccc ctccaaggta
2051 caaaacaccg tcctcaaccc ctgggactat gactgtgatg ggattgttag
2101 aaaagatact ctcaaaagac ttctcgaact ccccacagag acagaggagg
2151 aggagaaggc gtacccactc cttggacaaa aaacagagaa agagccatta
2201 tcagactccg acgaagagag cgttatctca agcacgagca gtggatcctc
2251 tcaagaagaa gaaacgcaga gacgaagaca ccacaagcca agcaagcgac
2301 gactcctcaa gcacctccag cgggtggtaa agaggatgaa aacactgtga
2351 tagataaata tagaaaccta gcagacccct cactcaatgt cacaggacac
2401 atggaaaaat tcatgcagtt acatattcaa aacgtacaag aaataagagc
2451 taaaaatgct aaaaaatccc tcaataaact ttacttttct gattaatagc
2501 ggcctcctgt gtccaaccta tttttcctaa accccttcaa aatggcgggc
2551 gggacacaaa atggcggagg gactaagggg ggggcaagcc cccctnnnnn
2601 nnnnnnnnnn nnnnnnnnnn nnggggggcg acccccccgc acccccccct
2651 gcgggggctc cgccccctgc acccccggga gggggggaaa ccccccctca
2701 accccccgcg gggggcaagc ccccctgcac ccccc