Sequence of DPV Bean yellow mosaic virus

Bean yellow mosaic virus isolate VM-0 polyprotein gene, partial cds.

ACC No: AY845011

Dated: 2006-01-01 | Length: 1649 | CRC: -2025001697

                
ID   AY845011   standard; genomic RNA; VRL; 1649 BP.
XX
AC   AY845011;
XX
SV   AY845011.1
XX
DT   01-JAN-2006 (Rel. 86, Created)
DT   01-JAN-2006 (Rel. 86, Last updated, Version 1)
XX
DE   Bean yellow mosaic virus isolate VM-0 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Bean yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1649
RA   Smitha R., Krishna Reddy M.;
RT   "Molecular characterization of Bean yellow mosaic virus from Vanilla
RT   fragrans";
RL   Unpublished.
XX
RN   [2]
RP   1-1649
RA   Smitha R., Krishna Reddy M.;
RT   ;
RL   Submitted (02-DEC-2004) to the EMBL/GenBank/DDBJ databases.
RL   Division of Plant Pathology, Indian Institute of Horticultural Research,
RL   Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1649
FT                   /country="India"
FT                   /db_xref="taxon:12197"
FT                   /mol_type="genomic RNA"
FT                   /organism="Bean yellow mosaic virus"
FT                   /isolate="VM-0"
FT                   /specific_host="Vanilla fragrans"
FT                   /tissue_type="infected leaf"
FT                   /ecotype="Doddaballapura"
FT   CDS             <1. .1458
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="AAX54480.1"
FT                   /translation="GNNSGQPSTVVDNTLMVIMAVYYAAEKLGIKGNLEDTLVFFANGD
FT                   DLLIAIKPECESYLDKFEGLFSELGLKYDFGSRTKNKGDLWFMSHRGIQIDGMWIPKLE
FT                   EERIVSILEWDRAIQPEHRLEAICAAMIEAWGYPTLLNHIRKFYLWVLGQAPYSQLSAE
FT                   GKAPYISEVALKHLYTEEKVTPAELERYNIALNDCFESESDEVLTCRFQSEQEKLNAGE
FT                   NKKDKGRKIGDNPSEEPERQSSRQILPDRDVNTGTVGTFSIPRLKKIAGKLNIPKIGGK
FT                   VVLNLDHLLDYNPPQDDISNTIATQAQFEAWYSGVKQAYEVDDSQMGIILNGLMVWCIE
FT                   NGTSEYLQGEWTMMDGEEQVTYPLKPILDNAKPTFRQIMSHFSQVAEAYIEKRNATEGY
FT                   MPRYGLQRNLTDYGLARYAFDFYRLTSKTPVRAREAHMQMKAAAVRGKLNRLFGLDGNV
FT                   GTDEENTERHTAGDVNRDMHTMLGVRI"
FT   mat_peptide     <1. .636
FT                   /note="nuclear inclusion protein"
FT                   /product="NIb protein"
FT   mat_peptide     637. .1455
FT                   /note="capsid protein"
FT                   /product="coat protein"
FT   3'UTR           1459. .1649
XX
SQ   Sequence 1649 BP; 537 A; 291 C; 402 G; 419 T; 0 other;

ay845011 Length: 1649  01-JAN-2006  Type: N  Check: 1282  ..

       1  ggtaataaca gtgggcagcc atccacagtg gttgacaaca cgctcatggt
      51  cattatggca gtttactatg cagcggaaaa gcttggtatt aaggggaatc
     101  ttgaagatac acttgttttc tttgccaacg gggatgacct gctaattgcc
     151  attaaaccag agtgtgaatc ataccttgat aaatttgagg gcttgtttag
     201  cgaactggga ttaaagtatg atttcggtag cagaacgaag aacaaaggtg
     251  acttgtggtt tatgtcacac agaggaattc aaatagatgg gatgtggatt
     301  cctaaattgg aagaggagcg catcgtttca attctggagt gggacagagc
     351  tattcaaccg gaacatagac ttgaggcaat atgcgcagca atgattgaag
     401  catggggcta tccaactcta ttaaaccaca taaggaagtt ctacctctgg
     451  gttttgggac aagcaccata tagtcaattg agtgccgagg gtaaagctcc
     501  atacatttcg gaagtcgcac tcaagcactt gtacactgag gagaaggtga
     551  caccagcaga gttggaaaga tacaatatcg cactaaatga ttgctttgaa
     601  tcagaaagtg atgaggtgct tacgtgtcga tttcaatccg aacaagaaaa
     651  gctcaatgct ggtgagaata agaaagataa aggcaggaag attggtgata
     701  acccttcaga ggaacccgag agacaaagca gtaggcagat attacctgac
     751  agggatgtca acacaggaac tgttggaaca ttttcaattc cgagacttaa
     801  aaagatagcg gggaagctta acattccaaa aattggtgga aaagtagttc
     851  ttaatttaga tcatctattg gattataatc cgccacagga tgacatctca
     901  aacaccatag cgacacaagc acaatttgaa gcgtggtata gtggtgttaa
     951  gcaagcatat gaagttgatg attcacagat gggcattata ctaaatggac
    1001  tgatggtatg gtgcatagag aatggcacat cagaatactt acaaggtgag
    1051  tggacaatga tggatggcga ggagcaagtg acatacccgc tcaaaccaat
    1101  cttggacaat gcgaagccaa cattccgcca aataatgtct catttctcac
    1151  aagttgcaga agcttacata gagaaaagaa atgcgacaga ggggtatatg
    1201  ccacggtatg gcctccagag aaacttaact gactacggtt tggctagata
    1251  tgcctttgat ttctatcgac tgacttctaa gactcctgtg cgtgctagag
    1301  aggcacatat gcaaatgaag gcagcagcag ttagaggtaa gttaaaccgg
    1351  ttatttggac ttgatggcaa tgttggaaca gacgaggaga acacagagag
    1401  acacacagca ggagatgtca atcgtgatat gcacaccatg cttggtgttc
    1451  gtatttagag tatccgtctt taaattctct ataatttggc gttacattac
    1501  ttaatactat gtattagtga ggtttcacct ccagcatttt aaattcagta
    1551  tgtgtatcat tctctctact ctgacagggt aagcagttag tgaggttgcc
    1601  tcgtgtgagc ctgatctttg tagagcgaga aaaaaaaaaa aaaaaaaaa