Sequence of DPV Rice dwarf virus
Rice dwarf virus isolate Yunnan segment S2, complete sequence.
ACC No: AY847464
Dated: 2005-01-08 | Length: 3511 | CRC: 2035063851
!!NA_SEQUENCE 1.0
ID AY847464 standard; genomic RNA; VRL; 3511 BP.
XX
AC AY847464;
XX
SV AY847464.1
XX
DT 08-JAN-2005 (Rel. 82, Created)
DT 08-JAN-2005 (Rel. 82, Last updated, Version 1)
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DE Rice dwarf virus isolate Yunnan segment S2, complete sequence.
XX
KW .
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OS Rice dwarf virus
OC Viruses; dsRNA viruses; Reoviridae; Phytoreovirus.
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RN [1]
RP 1-3511
RA Wu G., Zhu S., Li Y.;
RT "Cloning RDV S2 segment from RDV (China Yunnan isolate)";
RL Unpublished.
XX
RN [2]
RP 1-3511
RA Wu G., Zhu S., Li Y.;
RT ;
RL Submitted (06-DEC-2004) to the EMBL/GenBank/DDBJ databases.
RL Life Science, Peking University, 5# Road The Summer Palace, Beijing 100871,
RL China
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FH Key Location/Qualifiers
FH
FT source 1. .3511
FT /country="China"
FT /db_xref="taxon:10991"
FT /mol_type="genomic RNA"
FT /organism="Rice dwarf virus"
FT /isolate="Yunnan"
FT /segment="S2"
FT CDS 15. .3461
FT /codon_start=1
FT /note="minor outer capsid protein"
FT /product="P2 protein"
FT /protein_id="AAW31874.1"
FT /translation="MAYPNDVRNVWDVYNVFRDVPNREHLIRDIRNGLVTVRNLTNMLT
FT NMERDDQLIIAQLSNMMKSLSIGVEKAQNELSKLKTTDADRAAVLAAYQTSVLNIERNT
FT MLLTGYFKQLVLDLTGYVGASVYPILPFMITGDQSMMVDSIKVNMKNVFDDKHEQEIVL
FT PIHPACFVSTITEDTSSVVYADGDELYSVHVRHADMTMYVNVLGETVETRQLSMIGDSI
FT VPDDFAPSLLILRFSQDSVGEVFYLSHDNVKKFLGYSLEYTDKYSIFDVARRVSTTRNK
FT IIDGFCSVDGVPYLDGRFIYQPSGISADSNICAIYNSYVLDVLRYITECEVDTLRSVYD
FT RTSSTAFSKTDVLTSSLLTMQSNISALSAATPQLANDVITFDSTDLLSLGTVLTVSNEF
FT TADDTTLSTSLAGHCQVDYSEGSPQDKSMSIPVSCDSSQLASSTVHSYSADILGHGLKG
FT DRNMNLMINVPGLMNPQKVTVDYVYSDGYKLNFASVVAPDAPFWINATLQLSVSPSAHN
FT MLSKLTPLDNDACPGLKAQANTPVLVSMTINLDDATPALGGEVIQNCVFKIHHGDDVYS
FT FVTDFDVISYTSTSGTNCLKLISSVDITSQLPSDMVIYVMNGSPDAAFISGDSINMSSV
FT DWHQSTSQTVGNYVYTTMKAYWNVTSYNVEARPYATYVPGKINFTAVDHADVFVDDYNT
FT GVNSYVIVNSRIYYKGTPLYIEVPSGSFIKVSYFTSPLKNPTVDTYNAEISRNSAYLIK
FT ANASLDSVAAMLNNISNRIDAMERLMEPTRAQQIAGVVSSIGGVISLGMPLLGAIVVTI
FT GTIISIADPDKQGIDYHSVANAFMSWCQYAAVCRYEYGLLKRGDEKLDVLSFMPKRVVS
FT DFKNKPDVISLPELGESVLRGSSTDYLDTGINIIYNDMQLLGQGKLSDWLNKTVSKVEN
FT NAANFFERNLVKSLANKEVLPMHARVEITQTEKIGDVYRTTILYTGINEGSYLGGDVFA
FT SRLGDKNILRMNGFESGPGRFNAIVESTTEVGNFRVVDWTVSGMSRYEIYAAAGEVYPS
FT KDPSHADVQLLYESIVRDLTTRDGSFVLKHHDVLLLAGRLDAFEELIIKNASNYQYAFI
FT GSNCQNYAHDVVDILTKFKRPQRWIKDDDFKLYIQSIYDAL"
XX
SQ Sequence 3511 BP; 968 A; 729 C; 818 G; 996 T; 0 other;
AY847464 Length: 3511 January 11, 2005 08:45 Type: N Check: 750 ..
1 ggcaaaacct cgccatggct tatcctaatg acgtcagaaa cgtttgggat
51 gtgtacaacg tgttccggga cgtgccaaac cgtgaacatc tgattcgaga
101 tatccgcaat ggactggtta cggtccggaa tctcacaaat atgcttacta
151 atatggagcg cgatgatcaa ttgattattg ctcaactgtc caatatgatg
201 aaatcgttat caattggggt tgagaaggct caaaatgaac ttagcaaact
251 aaagactacg gatgccgacc gtgccgcagt cttagcagct tatcaaactt
301 cggttcttaa catagagcga aatactatgt tattgactgg gtacttcaag
351 cagttagttt tagacttaac tggttatgtg ggtgccagcg tatatcctat
401 cttacctttc atgattacag gagatcagtc tatgatggtt gactccatta
451 aagttaacat gaaaaatgtc tttgatgata agcatgagca ggagatagtc
501 ctacctattc atcctgcttg ctttgtgtca accatcactg aggacacttc
551 ttccgtagta tacgccgacg gagatgaact gtattcagtg catgttagac
601 acgcagacat gactatgtat gtcaatgtgc ttggtgaaac cgtcgagacc
651 aggcagctgt ctatgatagg cgactccatc gttcctgatg atttcgcgcc
701 ttccctgctg atattgagat tcagtcaaga ttcagtcgga gaggttttct
751 atcttagtca tgacaacgtg aaaaagtttc taggctacag tcttgaatat
801 accgacaagt acagtatatt tgacgtagcc agacgcgtgt ccacgacgcg
851 taacaaaata attgatggat tctgctctgt cgatggtgtg ccgtatcttg
901 atggacggtt catctatcaa ccgagcggaa ttagtgcgga tagtaatatc
951 tgtgctatat ataattcata cgttttagac gtgcttagat acattactga
1001 gtgtgaggtt gatacgttaa ggtcggtgta cgaccgaact tcgtcaactg
1051 cattctcaaa gaccgatgtc ttgacatcga gtctgctaac catgcaaagt
1101 aacatttcag ccctatctgc cgctaccccc caattggcga atgatgtgat
1151 cacgttcgat tctaccgatc tactttctct tgggacagta ttgaccgtgt
1201 cgaatgagtt tacagctgat gatacaacat tgagtactag tcttgcgggt
1251 cactgccaag ttgactacag cgagggatcg ccccaagaca agagcatgag
1301 tatacctgta agttgtgact cgtcgcagct tgcgtcatct accgtccact
1351 cttactcagc tgacatactg ggacatggac ttaagggtga ccgaaacatg
1401 aacttaatga taaatgtacc tggacttatg aacccccaga aagtaacggt
1451 tgattatgtc tattcggatg gctacaaact gaactttgct tcggtggttg
1501 cccctgacgc gcctttctgg attaacgcaa ctctgcaact tagtgtgtcg
1551 ccttctgcgc ataatatgct gagtaagtta acaccattgg ataatgatgc
1601 atgtcctggg cttaaagctc aggcaaatac gcctgtactt gtatccatga
1651 ccatcaatct tgatgacgcc actcctgctt taggaggaga ggtgattcaa
1701 aattgtgtgt ttaagataca ccacggcgat gatgtgtata gctttgtcac
1751 cgattttgat gtcataagtt atacctcaac gtccgggact aattgtttga
1801 agcttatatc aagcgtggac atcaccagtc agcttccctc tgatatggtg
1851 atctacgtga tgaatggatc gcctgatgcc gctttcatat ccggtgattc
1901 cattaatatg tcatcagtgg actggcacca gtccaccagc cagaccgtgg
1951 gaaattatgt ctataccacg atgaaggcct attggaatgt aacgtcgtat
2001 aatgttgagg ctcgtcctta cgccacgtac gtacctggaa aaattaactt
2051 tacggccgta gatcacgctg atgttttcgt agatgactat aacaccggcg
2101 ttaattcata tgtgatcgta aatagtagaa tatattataa gggaacccct
2151 ctatatattg aggtaccaag cggctcattc atcaaggtga gctacttcac
2201 aagccctttg aagaacccta ctgtggacac gtataacgct gaaatttctc
2251 gcaattcagc gtatctaatt aaagcaaatg cttcattaga ttcagtggcc
2301 gcaatgctaa acaatatatc gaatcgaatc gatgcgatgg aacgtttgat
2351 ggagcccaca cgtgcgcagc agattgcagg agtagtctca agcataggtg
2401 gagtcatctc actcggaatg ccattgctcg gagcgatcgt ggtaaccatc
2451 ggtaccatta tctccattgc tgacccagac aaacagggca ttgattacca
2501 ttcggtagcc aatgccttta tgtcctggtg tcagtatgcg gcagtctgta
2551 ggtatgaata tggacttctg aagcgtgggg atgagaaact agatgtgttg
2601 tcatttatgc cgaaacgtgt cgtgtcggat ttcaagaaca aacccgacgt
2651 tattagtctc ccagagctag gtgagtcagt actacgtgga tcgagcactg
2701 attatctaga tacggggatt aatatcatat ataatgatat gcaattactc
2751 ggacaaggca aactctccga ctggctcaac aaaactgtga gcaaggtgga
2801 gaataacgct gccaacttct ttgagaggaa tttggttaaa agtctagcga
2851 ataaggaggt cctaccaatg catgctcgag ttgagattac tcaaaccgag
2901 aaaattggtg atgtgtatag gaccacaatc ctatatacag ggataaatga
2951 aggatcgtat ttgggtggag atgtctttgc ttcgcggttg ggggacaaaa
3001 acatcttgcg tatgaatgga tttgagagcg gacctggaag gttcaatgct
3051 atcgtcgaat caactactga agtaggcaac tttcgtgtag ttgattggac
3101 ggtgtctgga atgtctaggt acgaaattta tgctgctgcc ggtgaagtat
3151 atccgagtaa agatccctct catgctgacg tacagctgct atacgagagc
3201 atagttcggg atttaaccac tcgggatggt agcttcgttt tgaagcatca
3251 tgatgtcctg cttctggctg ggcgacttga cgcttttgag gagctaatca
3301 taaaaaatgc ctctaattac caatatgcat ttattggttc aaactgtcaa
3351 aattatgcgc atgacgtggt tgacatcttg actaagttca aacgaccaca
3401 gaggtggatt aaagatgatg acttcaagtt gtacatccaa tctatctatg
3451 atgcattgtg atatgtacca gccagggctc agatgtatgc gtacttctga
3501 gttaaaatga t