Sequence of DPV Groundnut bud necrosis virus

Peanut bud necrosis virus from tomato nucleocapsid protein gene, complete cds.

ACC No: AY882000

Dated: 2011-02-27 | Length: 831 | CRC: 1893786630

                
ID   AY882000; SV 1; linear; genomic RNA; STD; VRL; 831 BP.
XX
AC   AY882000;
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DT   11-FEB-2005 (Rel. 82, Created)
DT   27-FEB-2011 (Rel. 108, Last updated, Version 3)
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DE   Peanut bud necrosis virus from tomato nucleocapsid protein gene, complete
DE   cds.
XX
KW   .
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OS   Peanut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-831
RX   PUBMED; 21299415.
RA   Kunkalikar S.R., Poojari S., Arun B.M., Rajagopalan P.A., Chen T.C.,
RA   Yeh S.D., Naidu R.A., Zehr U.B., Ravi K.S.;
RT   "Importance and genetic diversity of vegetable-infecting tospoviruses in
RT   India";
RL   Phytopathology 101(3):367-376(2011).
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RN   [2]
RP   1-831
RA   Ravi K.S., Bhanupriya M.;
RT   "Nucleotide diversity of Tospoviruses infecting economically important
RT   crops in India";
RL   Unpublished.
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RN   [3]
RP   1-831
RA   Ravi K.S., Bhanupriya M.;
RT   ;
RL   Submitted (10-JAN-2005) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology, Mahyco Life Sciences Research Center, Jalna-Aurangabad
RL   Road, Dawalwadi, Jalna, Maharashtra State 431 203, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Peanut bud necrosis virus"
FT                   /host="tomato; Lycopersicon esculentum L."
FT                   /isolate="Arvikendra"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Arvikendra, Pune"
FT                   /clone="Ar-2"
FT                   /db_xref="taxon:40687"
FT   CDS             1. .831
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /note="NP"
FT                   /db_xref="GOA:Q8JQ98"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JQ98"
FT                   /protein_id="AAW80650.1"
FT                   /translation="MSNVKQLTEKKIKELLAGGSADVEIETEDSTPGFSFKAFYDANKT
FT                   LEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM
FT                   ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKAGPSLEL"
XX
SQ   Sequence 831 BP; 276 A; 142 C; 175 G; 238 T; 0 other;

ay882000 Length: 831  27-FEB-2011  Type: N  Check: 2282  ..

       1  atgtctaacg tcaagcaact caccgaaaag aaaatcaaag aacttttggc
      51  tggtggctct gcagatgttg aaattgaaac agaagattct actcccggat
     101  ttagctttaa agctttctat gatgctaaca aaactcttga aataactttc
     151  acaaactgtt tgaatatttt gaagtgcagg aagcagatct ttgctgcttg
     201  taaaagtggt aagtatgttt tttgtggtaa aactattgtt gctacaaata
     251  ctgacgtagg gccagatgac tggaccttca aaaggacaga agcttttatc
     301  aggaccaaaa tggctagtat ggttgaaaag agcaagaatg atgctgctaa
     351  gcaggagatg tacaataaaa taatggaatt accattagtg gcagcttatg
     401  gattaaatgt ccctgcatct ttcgatacat gtgctttaag gatgatgctc
     451  tgcattggag gtcctctgcc tctcttgtct agcatgacag gtctggcacc
     501  aattatattc cctctggctt attatcaaaa tgtgaagaaa gagaaattag
     551  gaattaagaa cttttcaact tatgaacagg tttgcaaagt agccaaagta
     601  ctttctgctt cacagattga attcaaaaat gaactagagg aaatgtttaa
     651  atcagctgta aagctattga gtgagagcaa ccctggaaca gccagctcta
     701  tctcactcaa gaaatatgat gaacaagtca aatacatgga caaagctttc
     751  agtgccagtc tctcaatgga tgattatggt gaacattcta agaagaagag
     801  ttcaaaggct ggtccttcgc tggaattgta a