Sequence of DPV Groundnut bud necrosis virus

Peanut bud necrosis virus from chilli nucleocapsid protein gene, complete cds.

ACC No: AY882002

Dated: 2011-02-27 | Length: 831 | CRC: -1401252146

                
ID   AY882002; SV 1; linear; genomic RNA; STD; VRL; 831 BP.
XX
AC   AY882002;
XX
DT   11-FEB-2005 (Rel. 82, Created)
DT   27-FEB-2011 (Rel. 108, Last updated, Version 3)
XX
DE   Peanut bud necrosis virus from chilli nucleocapsid protein gene, complete
DE   cds.
XX
KW   .
XX
OS   Peanut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN   [1]
RP   1-831
RX   PUBMED; 21299415.
RA   Kunkalikar S.R., Poojari S., Arun B.M., Rajagopalan P.A., Chen T.C.,
RA   Yeh S.D., Naidu R.A., Zehr U.B., Ravi K.S.;
RT   "Importance and genetic diversity of vegetable-infecting tospoviruses in
RT   India";
RL   Phytopathology 101(3):367-376(2011).
XX
RN   [2]
RP   1-831
RA   Ravi K.S., Bhanupriya M.;
RT   "Nucleotide diversity of Tospoviruses infecting economically important
RT   crops in India";
RL   Unpublished.
XX
RN   [3]
RP   1-831
RA   Ravi K.S., Bhanupriya M.;
RT   ;
RL   Submitted (10-JAN-2005) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology, Mahyco Life Sciences Research Center, Jalna-Aurangabad
RL   Road, Dawalwadi, Jalna, Maharashtra State 431 203, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Peanut bud necrosis virus"
FT                   /host="chilli; Capsicum annum L."
FT                   /isolate="Bangalore"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Bangalore, Karnataka State"
FT                   /db_xref="taxon:40687"
FT   CDS             1. .831
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /note="NP"
FT                   /db_xref="GOA:Q5EGT3"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:Q5EGT3"
FT                   /protein_id="AAW80652.1"
FT                   /translation="MSTVKQLTEKKIKELLAGGSADVEIETEDSTPGFSFKAFYDSNKN
FT                   IEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTVAFIRTKM
FT                   ASMVEKSKNDAAKQEMYTKIMELPLVAAYGLNVPAAFDACALRMMLCIGGPLPLLSSIT
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKAELDEMFKSAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKPSPSLEL"
XX
SQ   Sequence 831 BP; 267 A; 139 C; 180 G; 245 T; 0 other;

ay882002 Length: 831  27-FEB-2011  Type: N  Check: 8552  ..

       1  atgtctaccg ttaagcaact taccgagaag aaaatcaaag aacttttggc
      51  tggtggctct gcagatgttg aaattgaaac agaagattct actcctgggt
     101  ttagctttaa agctttctat gacagtaaca aaaatattga gataactttc
     151  acaaactgtt taaatattct gaagtgcaga aagcagatct ttgctgcttg
     201  taaaagtggt aagtatgttt tttgtggtaa aactattgtt gctacaaaca
     251  ctgatgtggg gccagatgac tggaccttca aaagaacagt agctttcatc
     301  aggaccaaaa tggctagtat ggttgaaaag agcaagaatg atgctgctaa
     351  gcaagagatg tacactaaaa taatggaatt gccattagtg gcagcttatg
     401  gattgaatgt ccctgcagct ttcgatgcat gtgctttgag aatgatgctc
     451  tgtattggag gtcctctgcc tctcttgtct agcataacag gtctggcacc
     501  aattatattc cctctggctt actatcaaaa tgtgaagaaa gagaagttgg
     551  gtattaagaa cttctctact tatgaacagg tttgcaaggt agccaaagta
     601  ctttctgctt cacagattga atttaaagct gaactagatg aaatgtttaa
     651  atcggctgta aagctattga gtgaaagcaa ccctggaaca gccagctcta
     701  tttcactcaa gaaatatgat gaacaggtta aatatatgga taaagctttc
     751  agtgccagtc tctcaatgga tgattatggt gaacattcta agaagaagag
     801  ttcaaagcct agtccttcgc tggaattgta a