Sequence of DPV Groundnut bud necrosis virus

Peanut bud necrosis virus from tomato nucleocapsid protein gene, complete cds.

ACC No: AY882005

Dated: 2011-02-27 | Length: 831 | CRC: -1392959545

                
ID   AY882005; SV 1; linear; genomic RNA; STD; VRL; 831 BP.
XX
AC   AY882005;
XX
DT   11-FEB-2005 (Rel. 82, Created)
DT   27-FEB-2011 (Rel. 108, Last updated, Version 3)
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DE   Peanut bud necrosis virus from tomato nucleocapsid protein gene, complete
DE   cds.
XX
KW   .
XX
OS   Peanut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-831
RX   PUBMED; 21299415.
RA   Kunkalikar S.R., Poojari S., Arun B.M., Rajagopalan P.A., Chen T.C.,
RA   Yeh S.D., Naidu R.A., Zehr U.B., Ravi K.S.;
RT   "Importance and genetic diversity of vegetable-infecting tospoviruses in
RT   India";
RL   Phytopathology 101(3):367-376(2011).
XX
RN   [2]
RP   1-831
RA   Ravi K.S., Bhanupriya M.;
RT   "Nucleotide diversity of Tospoviruses infecting economically important
RT   crops in India";
RL   Unpublished.
XX
RN   [3]
RP   1-831
RA   Ravi K.S., Bhanupriya M.;
RT   ;
RL   Submitted (10-JAN-2005) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology, Mahyco Life Sciences Research Center, Jalna-Aurangabad
RL   Road, Dawalwadi, Jalna, Maharashtra State 431 203, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Peanut bud necrosis virus"
FT                   /host="tomato; Lycopersicon esculentum L."
FT                   /isolate="Ganewadi"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Ganewadi, Jalna, Maharashtra State"
FT                   /db_xref="taxon:40687"
FT   CDS             1. .831
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /note="NP"
FT                   /db_xref="GOA:Q84403"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:Q84403"
FT                   /protein_id="AAW80655.1"
FT                   /translation="MSNVKQLTEKKIKELLAGGSADVEIETEDSTPGFSFKAFYDTNKN
FT                   LEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM
FT                   ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKAGPSLEL"
XX
SQ   Sequence 831 BP; 277 A; 143 C; 174 G; 237 T; 0 other;

ay882005 Length: 831  27-FEB-2011  Type: N  Check: 3196  ..

       1  atgtctaacg tcaagcaact taccgagaag aaaatcaaag aacttttggc
      51  tggtggctct gcagatgttg aaattgaaac agaagattcc actcctggat
     101  ttagctttaa agctttctat gacactaaca aaaatcttga aataactttc
     151  acaaactgct tgaatatttt gaagtgcagg aagcagatct ttgctgcttg
     201  taaaagtggt aagtatgttt tttgtggtaa aactattgtt gctacaaata
     251  ctgacgtagg accagatgac tggaccttca aaagaacaga agctttcatc
     301  aggaccaaaa tggctagtat ggttgagaag agcaagaatg atgctgctaa
     351  gcaggagatg tacaataaaa taatggaatt accattagtg gcagcttatg
     401  gattaaatgt ccctgcatct tttgacacat gtgctttaag gatgatgctc
     451  tgcattggag gtcctctgcc tctcttatct agcatgacag gtctggcacc
     501  aattatattt cctctggctt attatcaaaa tgtgaagaaa gagaaattag
     551  gaattaagaa cttttctact tatgaacagg tttgcaaagt agccaaagta
     601  ctttctgctt cacagattga attcaagaat gaactagagg aaatgtttaa
     651  atcagctgta aagctattga gtgagagcaa ccctggaaca gccagctcta
     701  tctcactcaa gaaatatgat gaacaagtca aatacatgga caaagctttc
     751  agtgccagcc tctcaatgga tgattatggt gaacattcta agaagaagag
     801  ttcaaaggct ggtccttcgc tggaattgta a