Sequence of DPV Papaya ringspot virus

Papaya ringspot virus P isolate Hyderabad coat protein (CP) gene, partial cds.

ACC No: AY903266

Dated: 2005-04-17 | Length: 870 | CRC: -1604244201

                !!NA_SEQUENCE 1.0
ID   AY903266   standard; genomic RNA; VRL; 870 BP.
XX
AC   AY903266;
XX
SV   AY903266.1
XX
DT   15-FEB-2005 (Rel. 82, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Papaya ringspot virus P isolate Hyderabad coat protein (CP) gene, partial
DE   cds.
XX
KW   .
XX
OS   Papaya ringspot virus P
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-870
RA   Kunkalikar S.R., Byadgi A.S., Lakshmi R., Krishnareddy M.;
RT   "Molecular characterization of Papaya ring spot virus isolate APR from
RT   Andhra Pradesh";
RL   Unpublished.
XX
RN   [2]
RP   1-870
RA   Kunkalikar S.R., Byadgi A.S., Lakshmi R., Krishnareddy M.;
RT   ;
RL   Submitted (24-JAN-2005) to the EMBL/GenBank/DDBJ databases.
RL   Division of Plant Pathology, Indian Institute of Horticultural Research,
RL   Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .870
FT                   /country="India"
FT                   /db_xref="taxon:12206"
FT                   /mol_type="genomic RNA"
FT                   /organism="Papaya ringspot virus P"
FT                   /strain="P"
FT                   /isolate="Hyderabad"
FT                   /isolation_source="infected leaves"
FT                   /specific_host="Papaya"
FT                   /ecotype="Rajendra nagar"
FT                   /lab_host="squash"
FT   gene            <1. .870
FT                   /gene="CP"
FT   CDS             <1. .870
FT                   /codon_start=1
FT                   /db_xref="UniProt/TrEMBL:Q5EDG4"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAW82911.1"
FT                   /translation="SKNEAVDAGLNENEKLKEKEKQKEKEKEKQKEKEKDDASDGNDVS
FT                   TSTKTGERDRDVNAGTSGTFTVPRIKSFTDKMVLPRIKGKTVLNLNHLLQYNPQQIDIS
FT                   NTRATQSQFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQ
FT                   VDYPIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYA
FT                   FDFYEVNSKTPDRAREAHMQMKGAALRNTSRRMFGMDGSVSNKEENTERHTVEDVNRDM
FT                   HSLLGMRN"
XX
SQ   Sequence 870 BP; 306 A; 143 C; 215 G; 206 T; 0 other;

 AY903266  Length: 870  April 26, 2005 08:33  Type: N  Check: 8863  ..

       1  tccaagaatg aagctgtgga tgctggtttg aatgagaacg aaaagctcaa
      51  agaaaaagaa aaacagaaag aaaaagaaaa agaaaaacaa aaagaaaaag
     101  aaaaagatga tgctagtgac ggaaatgatg tgtcaactag cacaaaaact
     151  ggagagagag atagagatgt caacgctggg actagtggaa ctttcactgt
     201  tccgagaata aaatcattta ctgataagat ggttttgcca agaattaagg
     251  gaaagactgt ccttaattta aatcatcttc ttcagtataa tccacaacaa
     301  attgacattt ctaatactcg tgccactcaa tcacagtttg agaagtggta
     351  tgagggagtg aggaatgatt atggcctcaa tgataatgaa atgcaagtga
     401  tgctaaatgg cttgatggtt tggtgtatcg agaatggtac gtctccagac
     451  atatctggtg tttgggttat gatggatggg gaaacccaag tcgattatcc
     501  gatcaagcct ttaattgagc atgcaactcc atcatttagg caaattatgg
     551  ctcacttcag taacgcggca gaagcatata ttgcgaagag aaatgctact
     601  gagaggtata tgccgcggta tgggatcaag agaaatttga ctgacattag
     651  cctcgctaga tacgctttcg atttctatga ggtgaattcg aaaacacctg
     701  atagggctcg cgaagctcac atgcagatga aaggtgcagc gctgcgaaac
     751  actagtcgca gaatgtttgg tatggacggc agtgtcagta acaaggaaga
     801  aaacacggag agacacacag tggaagatgt caatagagac atgcactctc
     851  tcctgggtat gcgcaactga