Sequence of DPV Dasheen mosaic virus

Dasheen mosaic virus from taro polyprotein gene, partial cds.

ACC No: AY994104

Dated: 2005-04-20 | Length: 1941 | CRC: -963519879

                !!NA_SEQUENCE 1.0
ID   AY994104   standard; genomic RNA; VRL; 1941 BP.
XX
AC   AY994104;
XX
SV   AY994104.1
XX
DT   20-APR-2005 (Rel. 83, Created)
DT   20-APR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Dasheen mosaic virus from taro polyprotein gene, partial cds.
XX
KW   .
XX
OS   Dasheen mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1941
RA   Wei T., Pearson M.N.;
RT   "New Zealand Dasheen Mosaic Virus";
RL   Unpublished.
XX
RN   [2]
RP   1-1941
RA   Wei T., Pearson M.N.;
RT   ;
RL   Submitted (29-MAR-2005) to the EMBL/GenBank/DDBJ databases.
RL   School of Biological Sciences, The University of Auckland, Private Bag
RL   92019, Auckland, New Zealand
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1941
FT                   /country="New Zealand"
FT                   /db_xref="taxon:29271"
FT                   /mol_type="genomic RNA"
FT                   /organism="Dasheen mosaic virus"
FT                   /strain="DsMV1"
FT                   /specific_host="taro"
FT   CDS             <1. .1668
FT                   /codon_start=1
FT                   /note="contains nuclear inclusion body and coat protein;
FT                   Nib-CP"
FT                   /product="polyprotein"
FT                   /protein_id="AAX89500.1"
FT                   /translation="NNSGQPSTVVDNTLMVVISVYYSCIKQGWTEYDISQRIIFYANGD
FT                   DIILAVQQDDEIVLDTFQNSFAELGLNYDFSERTHCREDLWFMSHQAMKIGDVYIPKLE
FT                   QERIVSILEWDRSKEIMHRTEAICAAMIEAWGHTDLLREIRKFYLWLLEKDEFKALASE
FT                   GRAPYIAETALRKLYTDESAQKSELQRYWEAFNFEITSELDEVTMQADDTVDAGAGGGN
FT                   ANKTTTGGGNTNNTTTGGGNNTTTGGGNNTTTGGGNNTTTGGGNNTTTGGGNTTPTTGG
FT                   GNTTNTTPPAPPAPKTTETPVVKDVTPKDTGKGKEIVKDVNAGTSGTYSVPRLNKITHK
FT                   MNLPLVKGKCILNLNHLIEYKPEQRDIFNTRATHTQFEVWYNAVKKEYELEDEQMHIVM
FT                   NEFMVWCIDNGTSPDINGAWVMMDGNDQIEYPLKPIVENAKPTLRQIMHHFSDAAEAYI
FT                   ELRNAEKPYMPRYGLIRNLRDASLARYAFDFYEVNSKTPVRAREAVAQMKAAALSNVTT
FT                   RLFGLDGNVSTSSENTERHTAKDVTPSMHTLLGVSPPQ"
XX
SQ   Sequence 1941 BP; 608 A; 400 C; 463 G; 470 T; 0 other;

 AY994104  Length: 1941  April 26, 2005 08:41  Type: N  Check: 5294  ..

       1  aataatagcg ggcagccatc aactgtggtt gacaacacat tgatggttgt
      51  gatctcagtt tattattcgt gcatcaagca aggctggaca gaatatgata
     101  tcagtcaaag aattatcttc tatgcaaatg gagatgacat tattttagct
     151  gtccaacaag atgatgagat tgtgctggac acttttcaga actcttttgc
     201  agaactaggg ctaaactacg atttttctga gcgcacacac tgtcgagaag
     251  atttgtggtt catgtctcat caagcaatga agattgggga tgtttacatt
     301  cccaaacttg aacaagaaag gatcgtttca attcttgaat gggacaggag
     351  caaagaaata atgcatagaa cagaggccat atgcgcagcc atgatagaag
     401  catggggcca cacagacctc ttgcgtgaaa ttcgcaagtt ctatctgtgg
     451  ctccttgaaa aagatgaatt taaagcattg gcctctgaag gaagagctcc
     501  ttatattgct gaaacagcgc tcagaaagtt gtacacagat gagtctgcac
     551  aaaagagcga gctacaaaga tattgggagg catttaattt tgaaatcact
     601  agcgagcttg atgaagttac aatgcaggcg gatgatacag ttgatgcagg
     651  agcagggggt ggtaatgcaa ataaaaccac cacaggtggt ggtaatacaa
     701  ataataccac cacaggtggg ggtaacaaca ccaccacagg aggaggtaat
     751  aataccacca caggcggggg taacaatacc accacaggtg ggggtaacaa
     801  caccaccaca ggtgggggca atactacacc aaccactggt ggtggcaata
     851  ccacaaacac cacaccccca gctccgcctg cacccaaaac cacagaaact
     901  ccggtagtga aggatgtaac tcccaaagat actggaaagg gcaaagaaat
     951  tgtaaaggat gtcaatgctg gcaccagtgg aacatactcc gtaccccgat
    1001  taaataagat cacgcacaaa atgaatttgc ccttggttaa aggcaaatgt
    1051  atcttgaact tgaatcattt gatcgagtac aaacctgaac agcgggacat
    1101  ctttaacaca agagctactc acacacagtt tgaagtctgg tacaatgctg
    1151  tcaagaagga gtacgagctt gaggatgagc agatgcacat cgtaatgaat
    1201  gaattcatgg tttggtgcat tgacaacgga acatcacccg atatcaacgg
    1251  ggcttgggtg atgatggatg gaaacgatca aattgaatac ccgttgaaac
    1301  caattgtgga gaatgctaaa ccaactttgc gtcagattat gcatcacttt
    1351  tctgacgcag cagaggcata tattgaactg agaaatgcgg agaagccgta
    1401  catgcctagg tatggtctga ttcgcaatct tcgtgatgca agtctcgccc
    1451  ggtatgcttt tgacttctat gaggtcaatt caaagacacc ggttcgagct
    1501  agggaagcag tagcacagat gaaggctgca gccctatcca acgttaccac
    1551  taggttgttt ggattagatg gtaacgtttc aacatctagc gagaacactg
    1601  agaggcacac tgcaaaggat gtgacaccaa gcatgcacac cttacttggt
    1651  gtgtcacctc cgcagtaaag acctggtagg caggtcacag ttatagtctc
    1701  gctgtccgta tccttaattt gcatttagta ttgtatgtgt ggttctagtt
    1751  tgttatatta actacactta ctacagagtg gcttgccacc gatgtgaagt
    1801  ggtgctgtgc accctatatt ttacatcctt tgtgcgtttt aaggttactg
    1851  agccactgca tttatgccaa accgtaagtg cgccattggc gcggtaggtg
    1901  aggtactgag tgcacggtgc tcacaaaaaa aaaaaaaaaa a