Sequence of DPV Dasheen mosaic virus
Dasheen mosaic virus strain DsMV2 polyprotein gene, partial cds.
ACC No: AY994105
Dated: 2006-08-15 | Length: 1872 | CRC: 1798106491
ID AY994105; SV 2; linear; genomic RNA; STD; VRL; 1872 BP.
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AC AY994105;
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DT 20-APR-2005 (Rel. 83, Created)
DT 15-AUG-2006 (Rel. 88, Last updated, Version 2)
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DE Dasheen mosaic virus strain DsMV2 polyprotein gene, partial cds.
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KW .
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OS Dasheen mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1872
RA Wei T., Pearson M.N.;
RT "New Zealand Dasheen Mosaic Virus";
RL Unpublished.
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RN [2]
RP 1-1872
RA Wei T., Pearson M.N.;
RT ;
RL Submitted (29-MAR-2005) to the EMBL/GenBank/DDBJ databases.
RL School of Biological Sciences, The University of Auckland, Private Bag
RL 92019, Auckland, New Zealand
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RN [3]
RC Sequence update by submitter
RP 1-1872
RA Wei T., Pearson M.N.;
RT ;
RL Submitted (14-AUG-2006) to the EMBL/GenBank/DDBJ databases.
RL School of Biological Sciences, The University of Auckland, Private Bag
RL 92019, Auckland, New Zealand
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CC On Aug 14, 2006 this sequence version replaced gi:62633073.
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FH Key Location/Qualifiers
FH
FT source 1. .1872
FT /organism="Dasheen mosaic virus"
FT /specific_host="taro"
FT /strain="DsMV2"
FT /mol_type="genomic RNA"
FT /country="New Zealand"
FT /db_xref="taxon:29271"
FT CDS <1. .1599
FT /codon_start=1
FT /product="polyprotein"
FT /note="contains nuclear inclusion body and coat protein;
FT Nib-CP"
FT /db_xref="GOA:Q52P85"
FT /db_xref="InterPro:IPR001205"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="InterPro:IPR002173"
FT /db_xref="UniProtKB/TrEMBL:Q52P85"
FT /protein_id="AAX89501.2"
FT /translation="SIKQGWTEYDVSQRIVFYANGDDIILAVQQEDEAVLNTFQDSFAE
FT LGLNYDFSERTHRREDLWFMSHQAMKIGDVYIPKLEQERIVSILEWDRSKEIMHRTEAI
FT CAAMIEAWGHTDLLREIRKFYLWLLEKDEFKALASEGRAPYIAETALRKLYTDESAQKS
FT ELQRYWEAFNFEIIGEFDEVVMQADDTVDAGQGGNTTKTPAIGGGNTNNTTTGGGNDTT
FT AGGGNNTTTGGGDNTTTGGGNNTTTGGGNNTTTGDGNTTNNTTPPTPPAPKTTEISVMK
FT DVTPTDTGKGKGIIKDVNAGTSGTYSVPRLNKITHKMNLPLVKGKCILNLNHLIEYKPE
FT QRDIFNTRATHTQFEVWYNAVKKEYELEDEQMHIVMNEFMVWCIDNGTSPDINGAWVMM
FT DGNDQIEYPLKPIVENAKPTLRQIMHHFSDAAEAYIELRNAEKPYMPRYGLIRNLRDAS
FT LARYAFDFYEVNSKTPVRAREAVAQMKAAALSNVTTRLFGLDGNVSTSSENTERHTAKD
FT VTPNMHTLLGVSPPQ"
FT 3'UTR 1600. .1872
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SQ Sequence 1872 BP; 593 A; 369 C; 443 G; 467 T; 0 other;
ay994105 Length: 1872 15-AUG-2006 Type: N Check: 643 ..
1 tcgattaagc aagggtggac tgagtatgat gtcagtcaaa gaatagtgtt
51 ttatgcaaat ggagatgata tcatacttgc tgttcagcaa gaggacgagg
101 ctgtattaaa tacattccag gattcttttg cagaacttgg gcttaattat
151 gatttttctg agcgcacaca tcgtcgagag gatttatggt tcatgtccca
201 tcaagcaatg aaaattggag atgtttacat ccccaaactt gaacaagaaa
251 gaattgtttc aattcttgaa tgggatagga gcaaggaaat catgcatagg
301 acggaggcta tatgcgcagc tatgattgaa gcatggggcc acacagatct
351 tttgcgtgaa attcgtaagt tctatctgtg gcttcttgag aaagatgaat
401 ttaaagcatt agcttctgaa gggagagctc cttatattgc cgaaaccgcg
451 ctcagaaagt tatacacaga tgaatctgcg caaaagagcg agcttcagag
501 gtactgggag gcattcaatt ttgaaatcat tggcgagttt gatgaggttg
551 tgatgcaggc ggacgacaca gtagatgcag gacaaggtgg aaatacaaca
601 aaaactcctg caataggtgg aggtaacaca aacaacacca ccacgggtgg
651 cggaaatgac actaccgcgg gtggtggaaa caacaccacc acggggggag
701 gggacaacac caccacgggt ggtggtaaca acaccaccac gggtggtgga
751 aacaatacaa ctacaggtga tggaaataca accaacaaca ctacacctcc
801 aactccgcct gcaccaaaaa ccacagaaat ttcagtaatg aaagatgtta
851 ctcccacaga tactggaaag ggtaagggaa ttatcaagga tgttaacgct
901 ggcactagtg gaacatattc tgtacctcga ttgaataaaa tcacacataa
951 aatgaatttg cctttggtta aaggcaaatg cattttgaac ttaaatcatt
1001 taattgagta caaacctgag cagcgtgaca tcttcaacac aagagcaacc
1051 cacacacaat ttgaagtctg gtacaatgct gtcaagaagg agtatgaact
1101 tgaggatgag cagatgcaca ttgtaatgaa tgaattcatg gtttggtgca
1151 ttgacaacgg aacatcacct gatattaacg gggcttgggt gatgatggac
1201 ggaaatgatc aaattgaata cccgttaaaa ccaattgtgg aaaatgccaa
1251 accaaccttg cgtcagatta tgcatcactt ttctgacgca gcagaggcat
1301 atattgaact gagaaatgcg gaaaaaccat atatgcctag gtatggttta
1351 attcgcaatc ttcgtgatgc aagtctcgcc cggtacgctt tcgacttcta
1401 tgaagtaaat tcaaagacac cggttcgagc tagggaagca gtagcacaga
1451 tgaaggctgc tgccctatcc aacgttacca ctaggttgtt tggattggat
1501 ggtaacgttt ctacatcaag tgagaacact gagaggcata ctgcgaagga
1551 cgtcacacca aatatgcaca ctctgcttgg cgtgtcacct ccacagtgaa
1601 ggtctggtaa acaggccacg gttatagtct cactgcccgt atctttattg
1651 tgcatttagt attgtttgtg tggatatagt ttattctatt tgctgcactt
1701 actacagagt ggcctgccac cgatatggag tggtgctgtg caccctataa
1751 ttcatatcct ttatgctttt taaagttact gagccactgc acttatgtcg
1801 aaccgcaagt gcgtcaatgg cgcggtaggc aagacactga gtgcatggtg
1851 ctcacaaaaa aaaaaaaaaa aa