Sequence of DPV Impatiens necrotic spot virus

Impatiens necrotic spot virus N gene for nucleocapsid protein, complete cds.

ACC No: D00914

Dated: 2007-12-07 | Length: 1144 | CRC: 1367253554

                
ID   D00914; SV 1; linear; genomic RNA; STD; VRL; 1144 BP.
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AC   D00914;
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DT   05-AUG-1992 (Rel. 33, Created)
DT   07-DEC-2007 (Rel. 94, Last updated, Version 7)
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DE   Impatiens necrotic spot virus N gene for nucleocapsid protein, complete
DE   cds.
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KW   N; nucleocapsid protein.
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OS   Impatiens necrotic spot virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-1144
RX   PUBMED; 1840613.
RA   Law M.D., Speck J., Moyer J.W.;
RT   "Nucleotide sequence of the 3' non-coding region and N gene of the S RNA of
RT   a serologically distinct tospovirus";
RL   J. Gen. Virol. 72:2597-2601(1991).
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CC   These data kindly submitted in computer readable form by:
CC   Marcus D. Law
CC   Department of Plant Pathology
CC   North Carolina State University
CC   Box 7616 Raleigh, NC 27695-7616
CC   U.S.A.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1144
FT                   /organism="Impatiens necrotic spot virus"
FT                   /map="3' terminus"
FT                   /segment="S"
FT                   /mol_type="genomic RNA"
FT                   /clone="Bluescript"
FT                   /db_xref="taxon:11612"
FT   CDS             complement(207. .995)
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:P28975"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/Swiss-Prot:P28975"
FT                   /protein_id="BAA00760.1"
FT                   /translation="MNKAKITKENIVKLLTQSDSLEFEETQNEGSFNFTDFFTNNREKI
FT                   QNMTTASCLSFLKNRQSIMRVIKSADFTFGSVTIKKTRNNSERVGVNDMTFRRLDAMVR
FT                   VHLVGMIKDNGSALTEAINSLPSHPLIASYGLATTDLKSCVLGVLLGGSLPLISSVLNF
FT                   EIAALVLAIYQDAKHVELGIDMSKFSTKEAVGKVCTVLKSKGYNMNSVEIGKAKQYADI
FT                   LKACSPKAKGLAAMDHYKEGLTSIYSMFNATIDFGKNDSI"
FT   misc_feature    1137. .1144
FT                   /note="consensus sequence"
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SQ   Sequence 1144 BP; 352 A; 205 C; 169 G; 418 T; 0 other;

d00914 Length: 1144  07-DEC-2007  Type: N  Check: 1801  ..

       1  tttatttcac acgcaaacct tttttagttt atatattaaa acacacatta
      51  aacttatttc aaataattta taaaagcaca cttaatacac tcaaacaata
     101  attaattatt ttatttttta tttttatttt ttatttttat tatttttatt
     151  tttatttatt taaatgcatt taacacaaca caaagcaaac caagcttaaa
     201  tctcttttaa atagaatcat ttttcccaaa atcaatagta gcattaaaca
     251  tgctgtaaat ggatgtaagc ccttctttgt agtggtccat tgcagcaagt
     301  cctttagctt tcggactaca agcctttagt atatctgcat attgtttagc
     351  cttaccaatt tcaacagagt tcatgttata tcctttgctt tttagaactg
     401  tgcacacttt cccaactgcc tctttagtgc taaacttaga catgtcaatt
     451  ccaagctcaa catgtttagc atcttgataa atagccagaa ctagtgcagc
     501  tatttcaaaa ttcagtacag atgatatcag aggaagactt cctcctaaga
     551  gaacacccaa gacacaggat ttcaaatctg tggttgcaag accatatgag
     601  gcaatcagag ggtgacttgg aaggctattt atagcttcag tcagagcaga
     651  tccattgtcc tttatcattc caacaagatg aactctcacc attgcatcaa
     701  gtcttcggaa agtcatatca ttgaccccaa ctctttctga attgtttcta
     751  gttttcttaa ttgtgactga tccaaaagtg aagtcagcac tcttaatgac
     801  tctcattata gattgcctat tcttgaggaa ggataggcaa gatgcagtag
     851  tcatgttctg aatcttttca cggttgttgg taaagaagtc agtgaaattg
     901  aaagatcctt cattttgagt ttcctcaaat tctaaggaat cagattgagt
     951  caaaagcttg actatgttct ccttggtaat ctttgctttg ttcatcttga
    1001  tctgctgact ttactaactt taaagcttaa agtgttcaaa ttactaaata
    1051  gtacttgcgg ttaaagtagt atttggtaaa atttgtaatt tttcagtttc
    1101  tagctttgga ttatatgatg ttatattcgt gacacaattg ctct