Sequence of DPV Barley yellow mosaic virus
Barley yellow mosaic virus RNA 2 for polyprotein, complete cds.
ACC No: D01092
Dated: 2007-12-07 | Length: 3585 | CRC: -1158417440
ID D01092; SV 1; linear; genomic RNA; STD; VRL; 3585 BP.
XX
AC D01092;
XX
DT 05-AUG-1992 (Rel. 33, Created)
DT 07-DEC-2007 (Rel. 94, Last updated, Version 5)
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DE Barley yellow mosaic virus RNA 2 for polyprotein, complete cds.
XX
KW polyprotein; RNA 2.
XX
OS Barley yellow mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Bymovirus.
XX
RN [1]
RP 1-3585
RX PUBMED; 2016599.
RA Kashiwazaki S., Minobe Y., Hibino H.;
RT "Nucleotide sequence of barley yellow mosaic virus RNA 2";
RL J. Gen. Virol. 72:995-999(1991).
XX
CC Data kindly submitted in computer readable form by:
CC Satoshi Kashiwazaki
CC National Agriculture Research Center
CC Tsukuba, Ibaraki 305
CC Japan
XX
FH Key Location/Qualifiers
FH
FT source 1. .3585
FT /organism="Barley yellow mosaic virus"
FT /segment="2"
FT /strain="II-1"
FT /mol_type="genomic RNA"
FT /clone="pBYT8, pBYT296"
FT /db_xref="taxon:12465"
FT CDS 155. .2827
FT /codon_start=1
FT /product="polyprotein"
FT /db_xref="GOA:Q01207"
FT /db_xref="InterPro:IPR001337"
FT /db_xref="UniProtKB/Swiss-Prot:Q01207"
FT /protein_id="BAA00876.1"
FT /translation="MSASSSRQLFDCGSLDWPNKSLFGDPTTRDVMHEHISSTWNAVIR
FT RHMLAPNADAETILGRDGLPSAQFDAYGAMLPSFIQALNAPTTRLRITHRCPTAESILC
FT ADASHAPWLYMANNVCAYEATHLKPVQTFIAFDFAHGYCYLSLFIPLSFRITFENARSF
FT SRFLEQLPDILGAYPTLAAIYKTMLFAIRLFPEVLQAPIPIIAKRPGVLQFHVSDARGL
FT PPSWFPMKCGSVRSFVALITNNLNSDLLDGIVGSNGDGEHYTNWNSGHDHWIVNRFITV
FT RDLHSSLKSALDVDLDTEGGRNAVLDLLLDLGVTNLVRREKRFPAHFQGAESVYLLLSC
FT ERVGNELVAVQDALQEPLANHSGLDLRALIINLGGLPSRHSDICYTRNIFENDNHLVWN
FT FEFYRIASITRNAQIDRDMLSSSMANLFSNFVSESSNGQYRVKEPRPIAQYRVEHDEPV
FT ASGAPSAWWQVLIGITTAILGAIIFFLWRCFLRAKRVKFQAKDSFPWFTTSGDDDSPPP
FT PGDSPSHPPGRSPDRVLPRTVVRDLSFNDDDDLHSVDLDEAGSRFGEVVSLIARGNLRE
FT LAGAIPESLSNLTLLQTSASGSGFYTMVALYLATLGDAITAFHEHNDASPTTTQSLRTV
FT ELQLEARGLRFNEAGTPANLIQRGVNSSVGRALVRLTQSALLATGEKFRTRMATTLERI
FT AAERLNTLTAYDQRVIEMTTELLAAIKTALEVERSELTPHLANAEALLQVYNNLFSTDY
FT ASASLLALRREMILRSAEGRVGEQPTSASDAANEELVQRSMTKLDKEIELFQAQIDSQR
FT RAVTITEASNLRENILQPINTVANIAMAGAFLRGGARHRMPGMPDVAAPMPNPFRAFSG
FT RGHSLTTTRSGGLFRRPRV"
FT polyA_signal 3471. .3475
XX
SQ Sequence 3585 BP; 925 A; 930 C; 779 G; 951 T; 0 other;
d01092 Length: 3585 07-DEC-2007 Type: N Check: 2303 ..
1 aaaataaaac aaaacaaaac cgaacaaagc aaaacgaaac aaacacaaac
51 aacacacgct ccccgagctc acaatactcg tagagtgatt tccgtcatcc
101 tactgtttgc aagctttcca gcaaaccaac ccgcttgctt tcaaaccctc
151 catcatgtct gcttctagtt cacggcaact cttcgactgc ggcagtcttg
201 actggccaaa taagagctta tttggcgatc ccacaacgcg agatgtcatg
251 cacgaacaca tttccagcac gtggaatgcg gttattagaa ggcacatgtt
301 ggcgcccaat gccgacgccg agactatatt gggccgtgat ggtttaccat
351 ctgctcaatt tgacgcttat ggagctatgc tacctagctt cattcaagct
401 ctaaatgcac ccacaacgcg tctccgaatc acgcaccgct gtcccaccgc
451 tgagtccatc ttgtgcgctg atgcatccca tgctccttgg ttgtacatgg
501 caaacaatgt atgcgcatac gaagcaactc acctgaagcc tgtacaaact
551 ttcatcgctt tcgactttgc gcatggctat tgttacctca gtctcttcat
601 accactcagc tttcgcatca ccttcgaaaa tgctcgaagt ttcagtcggt
651 tcctcgagca gctccctgac atcttaggtg cgtatccaac attggccgca
701 atatataaaa caatgctatt cgctattagg cttttcccag aggtgctaca
751 agctccaatt cccatcatcg caaaaaggcc tggcgtgctc caattccacg
801 ttagtgatgc cagaggacta ccaccctcat ggttccccat gaagtgtggc
851 agcgtacgat ctttcgtagc actcattacc aacaacctaa acagcgattt
901 gcttgatgga attgttggtt caaatggtga tggcgagcac tacacaaatt
951 ggaactctgg acatgatcac tggattgtga atcgattcat aacagtcaga
1001 gatttgcaca gtagcttaaa gtcagctctg gatgttgact tggacacaga
1051 gggtggacga aatgccgttc tcgatttgct tctagatctt ggggtcacta
1101 atcttgttcg aagagagaaa cgcttcccag cacacttcca aggagctgaa
1151 agcgtatatc tacttctatc gtgcgagaga gttgggaacg agttagtagc
1201 cgtgcaagat gctctgcagg aaccattggc taatcattct ggtttggatt
1251 tgagagctct catcatcaat cttggcggtt taccaagcag acactctgat
1301 atttgctaca cacgcaacat ttttgaaaac gataatcatc tggtttggaa
1351 ctttgagttc taccggatag cctcaatcac gaggaatgca caaattgaca
1401 gagatatgct gagctcatcc atggcgaact tgtttagcaa ctttgtctca
1451 gaatcgtcaa atggccagta cagagtcaaa gaaccaagac ctattgctca
1501 gtacagggtt gagcatgacg aaccagttgc tagtggtgcc ccatctgctt
1551 ggtggcaggt tcttattggc atcaccaccg caatccttgg cgcaataata
1601 ttctttctct ggaggtgttt cttacgtgct aagcgtgtga aattccaggc
1651 gaaggactcc ttcccatggt ttaccacatc tggtgatgat gactcaccgc
1701 ctccccctgg tgactccccg tcgcaccctc ctggacgcag cccagatcga
1751 gttcttccgc gcacagttgt tcgagatctt agcttcaatg acgatgatga
1801 cttacacagc gttgatctcg acgaagctgg atcgcgtttt ggggaggttg
1851 tctctttaat tgcaagggga aatcttcgcg agttagctgg tgcaattcct
1901 gaatctctca gcaacctaac cctccttcaa acgagtgcga gtgggtcagg
1951 tttttacact atggtggctt tgtaccttgc cactttaggg gatgccatca
2001 ctgcgtttca tgagcacaat gatgcctcac ctaccacaac tcaatcactg
2051 cgaaccgtcg aacttcagct tgaagctcgt ggcttacgtt tcaatgaagc
2101 tggtacaccc gcaaatctca tccagagggg cgttaattct tctgttggta
2151 gagcacttgt gcgactcaca cagagtgctc tcctagctac tggtgagaag
2201 ttccggacac gcatggcaac cacacttgaa agaattgctg ctgagcgtct
2251 taacacatta accgcttacg atcagcgagt tattgaaatg acaactgagc
2301 tgctagcagc gatcaaaacc gctcttgagg ttgagcgcag tgaacttacc
2351 ccacatcttg caaatgccga ggctttgctt caagtttaca ataatctctt
2401 cagcaccgat tacgcttcag catcgctgct tgctctcagg cgcgagatga
2451 ttcttaggag tgccgaaggg cgtgttggag aacagcccac tagtgcttct
2501 gacgctgcta acgaggagtt ggttcaacgt tctatgacaa aattggataa
2551 ggaaattgag ttgttccaag cacaaattga tagccagcgc cgcgccgtta
2601 ccataactga agcatccaat ctcagagaga atatattgca gccaatcaac
2651 actgttgcaa atattgctat ggctggagct tttctgcgtg ggggcgcacg
2701 tcatcgcatg ccaggaatgc cagacgtagc tgcgcccatg cccaaccctt
2751 ttcgagcttt ctcagggagg ggacattcac tcacgacaac tcgaagtggc
2801 ggtcttttcc ggcgccctcg agtctagaat tctcatcaca gcagcattta
2851 ctttccaccg ccttagcata gtttagatca atatcatcca tttctctatc
2901 ctctcgccat ctgcacacca ttgccattaa tatggtagag ttagcgattc
2951 atcccttgct acgctcaaaa tctccatctt tagaccacct gcaaacacac
3001 aaaataccaa aaataccatt tatcattctg tttcaaacgc cagcatttta
3051 aattacccgc aattgcatta tcgtttcgcc atcaaagtat ggttcgtttc
3101 atcaacatct gctcgcacga ttgggtgtat ggggccagtg ttgtttcggg
3151 tatggaattc aaatggtaag aaattgattc ttctcaccat gagttttcca
3201 ggggataagt tcggtgctac agctagcggc tgtatcctta gcgatgcccc
3251 acaccacgaa acaccattga ttcttaggaa ttagcctttc aaatatccca
3301 actgcaatga gcacgatagc attgcatctc cactcaaggt ccggttagag
3351 tccctggcag gtgtgggcta caggagcatg ggaatgcttc tctgtcacca
3401 tctgtcgtct gcggcctcta tctagcacta cgagtggagc cacgtcttta
3451 aatccccagc atgtttactt tatgttctgc atagaaaacg tcacatctgt
3501 gatacaaaaa catgcaacac gtgcccatca tcggtcgcgg gttgtaggtc
3551 tgacgaacaa caactttgta cacaggaaat gtgac