Sequence of DPV Barley yellow mosaic virus
Barley yellow mosaic virus RNA 2 for polyprotein, complete cds.
ACC No: D01099
Dated: 2007-12-07 | Length: 3585 | CRC: 186539156
ID D01099; SV 1; linear; genomic RNA; STD; VRL; 3585 BP.
XX
AC D01099;
XX
DT 25-AUG-1992 (Rel. 33, Created)
DT 07-DEC-2007 (Rel. 94, Last updated, Version 9)
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DE Barley yellow mosaic virus RNA 2 for polyprotein, complete cds.
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KW polyprotein; proteinase; RNA 2.
XX
OS Barley yellow mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Bymovirus.
XX
RN [1]
RP 1-3585
RX PUBMED; 2016598.
RA Davidson A.D., Proels M., Schell J., Steinbiss H.H.;
RT "The nucleotide sequence of RNA 2 of barley yellow mosaic virus";
RL J. Gen. Virol. 72:989-993(1991).
XX
CC Data kindly submitted in computer readable form by:
CC Andrew D. Davidson
CC Max-Planck-Institut
CC f. Zuechtungsforschung
CC Carl-von-Linne-Weg 10
CC D-5000 Koeln 30
CC FRG
XX
FH Key Location/Qualifiers
FH
FT source 1. .3585
FT /organism="Barley yellow mosaic virus"
FT /segment="2"
FT /isolate="German"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:12465"
FT CDS 156. .2828
FT /codon_start=1
FT /product="polyprotein"
FT /db_xref="GOA:Q01365"
FT /db_xref="InterPro:IPR001337"
FT /db_xref="UniProtKB/Swiss-Prot:Q01365"
FT /protein_id="BAA00884.1"
FT /translation="MSTSSSRLFFDCGSLDWPNKSLFGDPTTRDVMDEHISSTWNAVIR
FT RHMLAPNADAETILGRDGLPSAQFDAYGAMLPSFIQALNAPTTRLRISAPLSTAESILC
FT ADASHAPWLYMANSVCAYEATHLQPVQTFIAFNFAHGYCYLSLFIPLSFRITPENARSF
FT SRFLEQLPDILGAYPTLASLYKTMLFAVRLFPEVLQAPIPIIAKRPGVLQFHVSDARGL
FT PPSWFPMKCGSVASFIALITNNLNSDLLNGIVGSNGDGEHYTNWNSGHNHWIVNRFITV
FT KDLHSSLKSALEVDLDTEGGRNAVLDLLLDLGVTNLVRREKRFPAYFQGAESVYLLLSC
FT ERVGNELVAVQDALQEPLANYTGKDLRALIINLGGLPSRHPEICYTRNIFENDNHLVWN
FT FEFYRIASITKNAQIDRDVLSSSMANLFSDFVSESSNGEYRVKEPRPVTQYRVEHDEPV
FT ASGAPSAWWQVLVGITTAILGAIIFFLWRCFLRAKRVKFQAKDSFPWFTTSGDDDLPPP
FT PGDSPSRPPGRSPDRVLPRTVVRDLSFNDDDDLHSVDLNEAGSRFGEVVSLIARGNLRE
FT LAGAIPESLSNLTLLQTSASGSGFYTMVALYLATLGDAITAFHEHNDASPATIQSLRTL
FT ELQLEARGLRFNEAGTPANLIQRGVKSSVGRALVRLTQSALLATGENFRTRMAATLERI
FT AAERLNTLTAYDQRVIEMTTELLAAIKTALEVERSELTPHLANAEALLQVYNNLFSTDY
FT ASASLLALRREMILRSAEGRVGEQPTSASDAANEELVQRSMTKLDKEIELFQAQIDSQR
FT RAVTITEASNLRENILQPINTVANIAMAGAFLRGGARHRMPGIPDVAAPMSNPFRAFSG
FT RGHSLTTTRGAGLFRRPRV"
FT mat_peptide 156. .920
FT /product="proteinase"
XX
SQ Sequence 3585 BP; 913 A; 897 C; 780 G; 995 T; 0 other;
d01099 Length: 3585 07-DEC-2007 Type: N Check: 5740 ..
1 aaaaataaaa caaccctaaa ccaaaacaaa caaaacgaaa caaacacaaa
51 catcgcacgc tcctcaggct cacaacactt gtagagtgat ttctgtcatc
101 ctactgtttg taagctctcc agcaaatcaa ctcgctcgct ctcaaattct
151 ccaccatgtc tacttccagc tcacggttat tctttgactg tggcagtctt
201 gattggccaa ataaaagctt atttggcgac cccacaacac gagatgtgat
251 ggacgaacac atttctagca cgtggaatgc ggttattagg aggcacatgt
301 tggctcccaa cgccgacgcc gaaaccatat tgggccgtga tggtttacca
351 tctgctcaat ttgacgcgta tggagccatg ctacctagct ttatccaagc
401 tctaaacgca ccaacaacgc gtcttcgaat cagcgcaccg ctgtctaccg
451 ccgagtccat tttgtgcgct gatgcatctc acgctccttg gttgtacatg
501 gcaaacagtg tgtgcgcata cgaggcaact catttgcagc ctgtacaaac
551 tttcatcgcc tttaacttcg cacatggtta ttgctacctc agtcttttca
601 taccactaag ctttcgcatt acccccgaga atgctcgaag tttcagtcgg
651 ttccttgagc agcttcccga cattttaggt gcgtatccaa cattggcctc
701 actatataaa acaatgttat ttgctgttag gcttttccca gaggtgctac
751 aagctccaat ccccattatt gcaaaaaggc ctggtgtgct acaattccat
801 gttagtgatg ccagaggact gccaccttcg tggttcccca tgaagtgcgg
851 cagtgtagca tctttcatag cgcttattac caacaacctt aacagcgatt
901 tgcttaatgg gattgttggt tcaaacggtg atggtgagca ctacacaaat
951 tggaactctg ggcataatca ctggattgtg aatcgattta taacagtcaa
1001 ggatttacat agcagtttaa aatcagctct agaagttgat ttggacacag
1051 aaggtgggcg aaacgctgtt ctcgatttgc ttctagatct tggagtcact
1101 aatcttgttc gaagagagaa acgtttccca gcatatttcc agggagctga
1151 aagcgtatac ctgcttcttt catgtgaaag agttgggaac gagctggtgg
1201 ctgtgcaaga tgctcttcag gaaccattag ctaattatac tggaaaggat
1251 ttgagagctc tcatcatcaa tcttggcggt ttaccaagca gacaccctga
1301 gatttgttac acacgtaaca tctttgaaaa tgataatcac ctggtttgga
1351 attttgagtt ctaccgaata gcctcaatta cgaagaatgc acaaattgat
1401 agagatgtcc ttagctcatc catggcgaac ttatttagtg attttgtttc
1451 agagtcatca aatggtgagt acagagttaa ggaaccaaga cctgttactc
1501 agtacagggt tgagcatgat gaaccagttg ctagtggtgc cccatctgct
1551 tggtggcaag ttcttgttgg catcaccacc gccattctgg gcgcaataat
1601 attctttctt tggaggtgtt tcttgcgtgc taagcgtgtc aaattccagg
1651 caaaggattc cttcccatgg tttaccacgt ctggtgatga tgacctcccg
1701 cccccccctg gtgattcccc gtcacgccct cctgggcgca gcccggatcg
1751 agttcttcca cgtacagttg ttcgagatct cagcttcaat gatgatgatg
1801 atttacacag tgttgatctt aatgaagctg ggtcgcgttt tggggaggtt
1851 gtctctttaa ttgcaagggg aaatctccgc gagctagctg gtgcgattcc
1901 tgaatctctt agcaacttaa ctctccttca aacgagtgca agtggatctg
1951 gcttttacac tatggtggct ctgtaccttg ccactttagg ggatgctatc
2001 actgcattcc atgagcataa tgatgcttca cctgccacaa ttcaatcact
2051 gcgcacgctc gagcttcagc ttgaagcccg tggtttgcgt ttcaatgaag
2101 ctggcacacc cgcaaatctc attcagaggg gcgttaaatc ttctgttggt
2151 agagcacttg tgcgactaac acagagtgct cttctggcca ctggtgagaa
2201 ctttcggaca cgcatggcag ccacacttga aagaattgct gctgagcgcc
2251 tcaacacgtt aaccgcctat gatcagcgag tcatcgagat gacaactgaa
2301 ctcctagcag caatcaagac tgctcttgaa gtcgagcgca gtgaactcac
2351 tccacatctc gcaaacgccg aggctctgct tcaagtttac aacaatctct
2401 ttagcaccga ttatgcttca gcatcgctgc ttgctcttag acgcgagatg
2451 attcttagga gtgctgaagg gcgtgttgga gaacagccaa ctagtgcttc
2501 tgatgcggct aatgaggaat tagtccaacg ttccatgaca aagttggata
2551 aggaaattga gttattccaa gcacaaattg atagccagcg tcgcgctgtc
2601 accatcactg aagcatccaa tctcagagaa aacatattgc agccgatcaa
2651 caccgttgcg aatattgcca tggctggagc ttttctgcgt gggggcgcgc
2701 gccatcgcat gccagggata ccagatgtgg ctgcgcccat gtccaaccct
2751 tttcgagctt tctcagggag gggacattca ctcacaacaa ctcgaggtgc
2801 tggtcttttc cgacgccctc gagtttagtt tttccatcat agcactattt
2851 actttccgcc gccctagcat aatttagatc aacattatcc atttcttcct
2901 cctttcacca tctgcacacc gctgccatta atatggtaga gttagcggtt
2951 catcccccgc tacgctcaac atctccatcc ttagatcacc tgcaaacaca
3001 taaaatacca aaaataccat ttatcattct gtctcaagcg ccagcatttt
3051 aaattacccg caattgcatt atcgttttgc catcaaagta tggttcgttt
3101 catcaacatc tgctcgcatg attgggtgta tggggccagt gttgttttgg
3151 gtatggaaat tgattggtga gaattgattc ttctcaccat gagttttcca
3201 ggggataagc tcggtgctac agctagcggc tgtatccttc gcgatgcccc
3251 acaccacaaa acaccactga ttcttaggaa ttagcctttc aaatatccca
3301 actgcaatga gcacgatagc attgcatctt cactcaaggt ccggttagag
3351 tccctggcag gtgtgggcta caggagcatg tgaatgctgc tctgtcacca
3401 tctgtcgtct gcggtctcta tctagcacta cgagtgaagc cacgtcttta
3451 aatccccagc atgtttactt tatgttctgc atagaaaacg tcacatctgt
3501 gatacaaaaa catgcaatac gtgcccatca ttggtcgcgg gttgcagtct
3551 gacgaacaac aacctttgta cacaggaaat gtgac